G205702 (zbtb8a)


Basic Information

Item Value
gene id G205702
gene name zbtb8a
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 24475935 ~ 24476893 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU278567
gaaaaagtaaaaaaacaaataaattattttttatcatagTGCATATTATAATTAAACATAATCATAGAAAACTGCAACCGTGTGACATTGGGGAAAAAGTCTGCGCTTCACTTTCCCTACAGAAAGTAGGGAAATAGCAATAGTCCCTATTCTGTCCAGCTTTTATCAAAGCAGTCCCAAAAAGTAGCAAAGGTATTCTTCCATgcatatgaaaaaaatatatatatatatatatatgtttgaaaGAGTTATCATTCAACTATAATTGAAGCAAAGGAAACACTGAATATGCATGCTTTGGATACTGCATATCTTTATGAAGTTTAACAAAAAGCATTCCATTTTGTCACAAAGGTCAACATCTCATTTAAAGTAAAGATTAAACAGTTGCATGTAACTAATAGACAACTAATATATCATAAATGTGTGCATTTACATTAGTGGATTACATATTTTGTGCATAAATTCTCTTGCATGGCTttagcacgcacacacgcacgcatgcacaacaggatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactttggtttAATTTCACTGCAGCTCCTCGTCACTGTCGTCAACCTGTTGGATGATGAGGTCAGCCCCCGAGTCTTCAGCCAGGTCGTCGTCATCGGTTACCATCCAGCTCCTCTTGctgtccccctcctcctccccgtcCACTCCCAATAACAGGGCCGGTTCCTCACTAGCACCATCTAGACTGTCCATGGGGATCTCATCACAATCCACTTCCTGGATGCATGTGGTGCACATGCGGTAGCGTCGTGTGCCCTCACACACCACATGCCCAGTCTCCTCCGTCACCTGACACTTACACTTCCTGCACACCAGCTTCCTGGCTTGATG

Function

symbol description
zbtb8a Predicted to enable RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in epidermal cell. Orthologous to human ZBTB8A (zinc finger and BTB domain containing 8A).

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 8A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278567 True 911 lncRNA 0.42 2 24475935 24476893

Neighbor

gene id symbol gene type direction distance location
insm1b insm1,LOC103359023,LOC100710315 coding downstream 24658 24448440 ~ 24451277 (-)
kiz kiz coding downstream 213410 24237019 ~ 24262525 (-)
pax1a pax1,LOC103359018,LOC101466677,LOC102791619,LOC100700371 coding downstream 344154 24127131 ~ 24131781 (-)
LOC120549070 qpct,LOC100700099 coding downstream 510175 23957775 ~ 23965760 (-)
LOC120549247 cnksr3 coding downstream 520651 23920191 ~ 23955284 (-)
gjb3 LOC104946721 coding upstream 6020 24482913 ~ 24485855 (-)
gjb10 LOC103359028,LOC104919306,LOC104946722,LOC101068359 coding upstream 12002 24488895 ~ 24491106 (-)
ppie ppie coding upstream 14732 24491625 ~ 24495581 (-)
pabpc4 pabpc4 coding upstream 20944 24497837 ~ 24505953 (-)
zpcx NA coding upstream 35170 24512063 ~ 24514658 (-)
G205701 NA non-coding downstream 29539 24443819 ~ 24446396 (-)
LOC120549041 NA non-coding downstream 42102 24429974 ~ 24433833 (-)
G205643 NA non-coding downstream 242826 24232642 ~ 24233109 (-)
LOC120548836 NA non-coding downstream 278551 24186796 ~ 24197384 (-)
G205493 NA non-coding downstream 901923 23536946 ~ 23574012 (-)
LOC120549591 NA non-coding upstream 41119 24518012 ~ 24518764 (-)
G205761 LOC104967137 non-coding upstream 92493 24569386 ~ 24575939 (-)
G205781 NA non-coding upstream 121861 24598754 ~ 24600552 (-)
G205818 NA non-coding upstream 306484 24783377 ~ 24785779 (-)
G205853 NA non-coding upstream 592569 25069462 ~ 25069677 (-)
LOC120548654 LOC106573685,LOC106610772 other downstream 765074 23707989 ~ 23710861 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other downstream 1241137 23024161 ~ 23234798 (-)
LOC120549684 NA other downstream 1528125 22944937 ~ 22947810 (-)
G205380 NA other downstream 1538078 22910107 ~ 22937857 (-)
LOC120549283 khdrbs1 other downstream 1692463 22778005 ~ 22783472 (-)
runx3 runx3 other upstream 139025 24615918 ~ 24664770 (-)
rsrp1 NA other upstream 275260 24752153 ~ 24755421 (-)
fndc5a fndc5,LOC108237574 other upstream 366828 24843721 ~ 24877345 (-)
G205845 bsdc1 other upstream 476313 24953206 ~ 24957041 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other upstream 595462 25072355 ~ 25074124 (-)

Expression


Co-expression Network