G205887


Basic Information

Item Value
gene id G205887
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 25116784 ~ 25149106 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU278835
TCTTTATTATCATTGTACATTAGCTGTGTAGTTACAGGTTGCATATACACAAAGTAATGGTTCGCACTCCTCACACCAATGTGCCATTCTCACGTCAAACATCCCTCAACTTATTGCCTCATATTTTACACAGCATGTTCAAAGAAATGTCAGAACATTTCTGTACACTGGGCGGCAGCAGTGAGCTGCGCCAGCACTGACAGATAAAGAAACAAGAGCAGtgtgtctaataataataacaataataagaaCAATAGAAAAACAattgtttaaataaaacaataaatcgGGGGAATAATAAATGTCATATAACAACTActgaaatatgtaaatatgaagaaaaaaaacttgtgaGAAAGTCAAGTTGTTTTCACACTTTAATTTCTCCATTCCCCATTAGCTAATGTAGCCCCATTTTAACACTCCAGCAATTAGCCCATGGAATATGTATAAACTTATATTTTCTACCTTCTAAACTCAAGTTTCCTAAAAATGTGCCACTGAGCTTCTGGTAGATGGGAAACATCATATCATATTGTTAAAGTCATATTGTTAGTGTTAGAGCCTGTATCAGTATTGCCCCAGTATGAGGACCAATATGTGTCAGGCCCTAGTCTGGACTAGGTGTTAATGTGTGGCAGAAATTTTATtcaaaatgtggaaaatgttgtcactttaattcctcctcctcctcctcctcctcctccttcatccTTCTACATTGTAgctgctttgtttgtttttttacaaacacATTTCTCACCTTCTTGTTTTCCTTCTGTTCTCCTGTCTTACCAGCAGCAACCATTTTGCAGTTGAACAGATGTTGATATGACAGCATGCACCAGTGCTGagtcaacataaatacagaatAGTAAAAGGCTGAGGCATCTGTAATTATTCACAGATGCttcttttatcattttgtgAAATCAGAATCAAAATATTCTTCTGAtatcagttcttttttttttttaccatgccATAATATTATATTTTCAACATCTGTTGCGCATGTGTGTTGATGTGGACCACAGCCACCATGCATCAAAAGCTTGCTGGATTCTGTTTCTTTAGTCTTGTGGTTGCACTTCCAACGTTATTCCTGGCTGACACTGCTAATAGCTGCTCCATCTAAAACCTGACAaaaacctgtctctcttttaACACACCTTCATAGGTACACTATATGTTCTCTCCTCACACTTCCCTCTCTCCCAACTTCACATCTCACACATACTTTTACCTGCTCTAGcctgtaaattCACTGCATTTAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278835 True 1280 lncRNA 0.37 2 25116784 25149106

Neighbor

gene id symbol gene type direction distance location
LOC120549632 LOC103365837,LOC101071868 coding downstream 30933 25080033 ~ 25085851 (-)
rhd LOC103370138,LOC104956406,LOC108237237 coding downstream 347104 24765124 ~ 24769680 (-)
fam167b fam167b,LOC105925981 coding downstream 571902 24543000 ~ 24544882 (-)
lck lck coding downstream 576624 24527287 ~ 24540160 (-)
LOC120549589 hdac1,LOC104919311,LOC102207424,LOC103153388,LOC108237416 coding downstream 590152 24519641 ~ 24526632 (-)
LOC120549779 NA coding upstream 133416 25282522 ~ 25284535 (-)
LOC120549778 NA coding upstream 135485 25284591 ~ 25287060 (-)
tpo NA coding upstream 220411 25369517 ~ 25393817 (-)
sntg2 sntg2 coding upstream 253406 25402512 ~ 25482994 (-)
kiaa1109 kiaa1109 coding upstream 346119 25495225 ~ 25587817 (-)
G205854 NA non-coding downstream 46448 25070015 ~ 25070336 (-)
G205853 NA non-coding downstream 47107 25069462 ~ 25069677 (-)
G205818 NA non-coding downstream 331005 24783377 ~ 24785779 (-)
G205781 NA non-coding downstream 516232 24598754 ~ 24600552 (-)
G205761 LOC104967137 non-coding downstream 540845 24569386 ~ 24575939 (-)
G205937 NA non-coding upstream 85190 25234296 ~ 25235721 (-)
G205941 NA non-coding upstream 117725 25266831 ~ 25267035 (-)
G205978 NA non-coding upstream 240045 25389151 ~ 25389389 (-)
LOC120549113 LOC103354038 non-coding upstream 642451 25791557 ~ 25795395 (-)
G206111 NA non-coding upstream 747710 25896816 ~ 25897191 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other downstream 42660 25072355 ~ 25074124 (-)
G205845 bsdc1 other downstream 159743 24953206 ~ 24957041 (-)
fndc5a fndc5,LOC108237574 other downstream 239439 24843721 ~ 24877345 (-)
rsrp1 NA other downstream 361363 24752153 ~ 24755421 (-)
runx3 runx3 other downstream 452014 24615918 ~ 24664770 (-)
gnmt gnmt other upstream 119198 25268304 ~ 25344654 (-)
LOC120549744 NA other upstream 183784 25332890 ~ 25367867 (-)
G206198 fbxo33,LOC102800092 other upstream 1672582 26821688 ~ 26825064 (-)
LOC120549840 NA other upstream 2862933 28012039 ~ 28034752 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other upstream 2897099 28046205 ~ 28204448 (-)

Expression


Co-expression Network