G206198 (fbxo33,LOC102800092)


Basic Information

Item Value
gene id G206198
gene name fbxo33,LOC102800092
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 26821688 ~ 26825064 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU279261
TTCCTCTTCAGAATAATGCAGAACTATTTGtaggttttttttaatctcagaGCCCTTCATATTATGAGGCATACTCCTTTTCTTTGACTCGATGACTTCTTTTCTTTGACTCAAATCAATTTTAATACAAAGAAAGGGCTCTGGAACCATTGATACCAGTCAGAAAGTCTTGACCTCTAATTGAGAGCAAAAGCAGCTATATCCTATATCCCgtaaatagaatagaaaaaaaatatgcaaacaTTTACTACCAGCTCATTACAGAACAAAATAGAACAGAGCGGGGGAGGGGGTGTTGTATTGTGACAGGCTGCGTTTTATAGTTCGGCGCTGAATGTCAGTCGGAAGACGAAGCTCCCTAGTTAATCAACTAGCAAGGTTTCCCGAAAAGTCGACAAGTGAGCTGGGTGGGAAATGTGCCGGCTGCAAGCATGTAACAATATTCTCCATTACACCATCAGTAAGGTGCTCAAAATCCTTAATATAACCACTGATCCGAGCCACAGCACTGACATGGTTGTTGCTAAACACAGCATTACAACTGATTAGCACCTGCCACAGTCAGCCACATCGCAGTGGAGATTCCCACCCTGCTGCCAAGGCTCTCGAACTAGTGGACAAGTGCAAAAGGTGCTCTGTCAGAGCAACAGAAGAAGCAGCTATGGTTGTGTTACCCAGGAAGCGATTGATAGGTTAGTTTACAAACTCCAACCTTTGCTAGAGTTGAGCAGACAGACCGACACAGAgcagaggtttaaaaaaaaaaaaacacgttcaCAACGCAGCCCCAAATCCCACCGGTCCATCACTCAACCCGCCTGCATGTCCTGTTCTCGCGGTTAGCAagataatcataataataataatatatctgTATTTAAATACACACAAAGCCTATACAGGCAAGGGAACCACCACACAGGAAAACAAGATTATACACAGAGCAGGGAGAGATGATCAGTCAAAGAAATCAAAGTTACATCATACAGAGGCTCTGGAGGTTATTACGGTGAAGGGGAGACATCAAGCTCTGACGACTTTTCGATcaagaccagaccagactgggCCATGCCAGACAAGAGGGCATTTGAAGCAGCACGAGTACGAGTGACCCATTTTggcagacaaataaaaaaatggttcATGACTCAAGTCTTGTCTGTGGTCAGGGACCACAGAGTGGTATGACTTCTAACTGAATGAATATCCAGTTTTAAAAGGGATATTCTTAAATTGGAAAATCGATTTAAAACATCAAtgattttatctgtttttccAAGACACTGGCTAACTAGATAATCAGGAGGCAAAACAGGGAATCATTTGGAAAATGGTAGGACTTGATTGTATGCTAAAACCCCcgtgaaagaaacaaaaaataaaagtaaaaataaaatcaaatcagCTCACATAAATGATACTCATAGATTGTTTTAAGATCCAGTTTAGATTTCTCACTTAGGTCTGCTTTGGCCTGGTTTAGAGGTCTGAGTTGACTTGGACTTTGTTGGTCTGGACTGGTCTTGACACAGTTTAGGCTGTGATGTGTTGGACTTGCCATCCCTGCCTACATGCCCATGCTGAAGGCGTGCAGCTCGTGGTGGAAGTGATGGGTGGGTTCGGACAAAACCAGGCTGGAATCCAGGCAAGGGTGCCAGACACGGGCGAGGCCCAGAGAAACCTCCTTGACCAGGTTATGGACCGGGTCGCCATCCATGCACACTGCCTGGTCCGGATCAAAGTCGATGCTCTCCTCAGAGACGGTCAGGACGCGAAGGTTGGAGCCACGCAGCCGAGAGATGGCCACCAAATTATGGGCCCAAACGGTGTACCATGTATCACCAGTACAGCCAGCTGAGTACATCTCCATGCCAAGAGGACCAACGGGTCTTCGTTCCGATTGATGCTGAGGTCAGGGAAGTCGGGGTCATCCCTCAGGAGCAGGAAGTGAGTCAGCGTCTTGTTGTACTGCTGGGAAATGAGCTCCAACGTGGCATCAGTCACCAGTGTGCTGTAACTGTCGAGGTGGAGGCGCTCCAGAGGGAGGCTAGGCTTTAGGACCCCGAGGAGCTCTGAGCTGTTGACCTCCAGGGCCATGACGTACACTCGCAGGTTGGCACTAACACGAATCTGG

Function

symbol description
fbxo33 Predicted to act upstream of or within SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be part of SCF ubiquitin ligase complex.

NR:

description
PREDICTED: F-box only protein 33

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279261 True 2134 TUCP 0.46 2 26821688 26825064

Neighbor

gene id symbol gene type direction distance location
lrfn5a lrfn5,LOC103376550,LOC102799810 coding downstream 585009 26107688 ~ 26236679 (-)
LOC120549759 NA coding downstream 971299 25846794 ~ 25850389 (-)
LOC120549112 LOC103354036,LOC102215713,LOC102292014 coding downstream 1037130 25763818 ~ 25784558 (-)
LOC120549285 LOC101487772,LOC100702802,LOC102799341,LOC107392602,LOC105939742,LOC107085779,LOC101078894 coding downstream 1066018 25747994 ~ 25755670 (-)
LOC120549286 LOC100702802,LOC101487772,LOC107392602,LOC102799341,LOC105939742,LOC101078894 coding downstream 1074979 25739705 ~ 25746709 (-)
gemin2 gemin2 coding upstream 17044 26842108 ~ 26847986 (-)
brms1la brms1l coding upstream 45979 26871043 ~ 26876821 (-)
LOC120549126 LOC104961455,LOC102797735,LOC102211125,LOC101469143 coding upstream 131891 26956955 ~ 26959609 (-)
psma6a psma6 coding upstream 155298 26980362 ~ 26985210 (-)
LOC120549239 NA coding upstream 160340 26985404 ~ 26996579 (-)
G206197 fbxo33 non-coding downstream 152 26821279 ~ 26821536 (-)
G206195 fbxo33,LOC104952920,LOC102800092 non-coding downstream 5654 26815493 ~ 26816034 (-)
G206183 NA non-coding downstream 165591 26655887 ~ 26656097 (-)
G206182 NA non-coding downstream 168392 26623076 ~ 26653296 (-)
G206151 NA non-coding downstream 536942 26284375 ~ 26284746 (-)
G206199 NA non-coding upstream 4148 26829212 ~ 26832435 (-)
G206219 ctage5 non-coding upstream 38166 26863230 ~ 26865501 (-)
G206225 NA non-coding upstream 44388 26869452 ~ 26870436 (-)
G206240 ralgapa1 non-coding upstream 94737 26919801 ~ 26922567 (-)
G206251 NA non-coding upstream 144219 26969283 ~ 26969656 (-)
LOC120549744 NA other downstream 1453821 25332890 ~ 25367867 (-)
gnmt gnmt other downstream 1477034 25268304 ~ 25344654 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other downstream 1747564 25072355 ~ 25074124 (-)
G205845 bsdc1 other downstream 1864647 24953206 ~ 24957041 (-)
fndc5a fndc5,LOC108237574 other downstream 1944343 24843721 ~ 24877345 (-)
LOC120549840 NA other upstream 1186975 28012039 ~ 28034752 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other upstream 1221141 28046205 ~ 28204448 (-)
G206919 ccdc88c other upstream 3109198 29934262 ~ 29934566 (-)
LOC120549387 NA other upstream 3856863 30681927 ~ 30703278 (-)
G207202 NA other upstream 4357959 31183023 ~ 31183555 (-)

Expression


Co-expression Network