G207327 (arhgap5)


Basic Information

Item Value
gene id G207327
gene name arhgap5
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 31975818 ~ 31979760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU280713
GGTTCCTTTGGCGTCTTGggcgtcttcttcttcttcatcttcttgtCCTCCTGCTCAGGGTCGGAGGTGATGGCGGGGTTATCTATTCCACCCTTCCAGGGGTCGGCAGGGGACAGCAGCGGGTCCTCCTCGCTGCCCCGGTGGGctcttccctttttctttttctgcgtGGCGGGGCCCGACTCCTCCCCATCGCTGTCGGAGTGGAATCGTCTTTGGTAGGCCTTTGTCTTGCTGAACAGGATTTTGGAACGGTGTTTGTATTTCGACGGCCGCCGTCCGGCCTGGGACTTCCTGTCGAACCCGTTCTCTTCCTCTCCGCCTCCGTGGAGGCCGTGCAACCCGCCGAAGGAGTTTCTGATTTTGACCAAGCGGCTGTGCGCGTCGTCGGGCACGGCGTATATGTCGTCGTTGTGGAAGCCCCTGGACCTTAGCAAGGTGTCCACGGGGTCTGCATAGTTGTCGGACGCCTCCACGTCCTCGCTGTGCGTCGTCGGGCCACGTGGGATCCGACGGTTGCTTCGCATGCCGGCCTCGATGGTTTTGAGCAGGTTGGGGTccagctttttcacattaggttTGGGGAGCACTGGTTTGGGCCGGACGGGTGGAGGCACTTTGTGGTTACGTTCGTGTTCTCCAATTGGCGTGCTGTGGACTGGGTACTCGTTGCCTTCTAGGTCGATGCGGTACTTGGCCCGCTCGCTGGGCGTGGGGAGAAGCTGAACGTCATCACCTATTGGACTGTAGGGTGGAGGGGCCTCGTTATCATCGTCAGATTCTGGGTAATAGGTATTGTAGGCCGGGGAGTGGCTATGGGGCGAGGTGGGGAAGACGTCTTCGCTGGCGCCAGTGGTGCACTCCCGCGACGAGCTGTCAAACAGGAAGGAACTCTCAATGTGCTGCTTTTTCTCCAGCACCTCGTTGAAAAAGGGCGTAAAAACCTCCGTCTGCCGATGGTACTGTGACAGCGAGTAGAGTGCCGTGAACTTGGCAGTAATCTCTGTGGCAATGTGCTCTCCCTCCGTCATCAACTCTTTGATGGCATCGTTCTCAAAGAAATCTGCCTGGCTGTCTGTAATCGCCACCATCTGGACGGGGATCACGTCCTGGACTTCGGCCAAGAACGCCCGCAGGGTCGCCATCGAAGCCTTGCGTTTTGCAGAGTAGACCAAAATGTAGCCGTGCACCATTTCATCTTTGCGGACGCCGATAGCGGTGTGGTAGGACAAGACGGTGACCTGGATCCTCCTCCTGCTGTCCCCGATGATCTTGTCCAGTAGGAGTGTGTTGCTCTGGCCCGGATGCCCTGCACTACAGCAATGCGAGTCTAGGAAAGGCGAGAGGATGAGGTCAACGCTGAAAGGATCCCAGCACATGGCGCACATGACTATCCTAAGGTCCGTCTCAGACATGTCTTTGATAGAGGGCAGTGGGGCCAAGACATCAAAGTTATGCTTCAGCCCTTCCAGCACTGCTCGGAGACCCTGCTTAATTTGGAACTCGGTGAATTTACGTGGAAAGGCCCCAGAGGGGATGTCGACGAAGGTGCACTGCAGCTTGTTTGCCAGCTGTTGGCCCTGGTGCCTTAGGATAGGTATGTTTTTGCAAACATTGTCCCTCTGATTAGCCAGGATCAGAATGAACGGCAGTGGTCGAGCAAACCTATCTCTCCTACTCTGTGCTATCTCCGCTCTGATCCTGCCTATGCAATCTCCGATACAGTTGAGGGACTCTATGGAGTTGAACACACAAAAGCAGCCATGCGGCTTGAACGTGGTGACCCACGAATGGCTAAAGAGCAGCGTGGAATTGACATCCACCGGGAGAAGCTCCAGCTCGTAAATTTTACCATCCAGGGTGTACTCATCATCTGTAGACTGAGCTCTGATCTCATTGGCTAGTTCCTGTGAGAGACCCTCCCTTCCCAGGAGGCAGAGGTTGATCTTATCGATGTTGGCACTGTTATAGTAGAGATTAGAGCGGCCGTGGTCGAGCTGTACCAGCCTGTTTCCTAAAACCTGCTCCACTTTCAGATCCACACAGTTCTGCCCACTCAGGCACGTCTCCTTGGTGGGATGGTAAACAAACCCAATGTGTTTGAGGAGCAGCGACTCTCTATCTGGGGCGAGTTTCTGCAGTGCTCTGTATCTGGGCTCCTCGTTCAGCACACAGTGAATCTCGCTCATCTTGTTGCAGCTGGGGGTGGCATTCAGATCCAAGTCATAGAATAGCTCAGCGTGCTCAAAAAGCATTTCCTGAAAATCCTCTTTGGCCCTTTCAACTATTTCCTGCTGATGTCTACAGTAAACATCCCTCCTATCTGATTCCGTGATGTACTTGTAGGCCTCGTCCTCCATGACAAAGCACATGACTTCCTCCCAAGGCTGCCCAGCGCTGATAAAATGAACCCTCTCCAGCGTCTTCTTAAACCTGTCTTTCATCTCCACCCTTCTCTTCTCAGACAGCAAGTGCTGGACGTGGTTGTGGTAAATTCTCTCACCATCGGGCGTGTCGAGGATGTCAAAGGGTATCCTGCGGTCGCTGATGTCGATGTGGTCCGTCTCGTCCCACGGCGTTTGTTCGAGGACCACAAACCAGTACTGGAAATCGGCCCGGTTCCGGATCACACTCTGAGCCTCGGGCCACGAGAGGTGTTCGACCTCCTCCAGGTTATTGAGGAGGTTGTTAAGGGTTTTCGGTAGCGTTGTCAGatactcttccctcctcctcttgatGTGCTCCTGCTTCAGTTGTGCAATGTGCTTTGTGAACATGTTGCGTGCTTTTCTGGAGCCCTCCAAGGTGATGAACTCTTCATAGTCCGGTTGGCCCTTCAGATTATTCATCACCATCTTCCACGTGGTGTGGTAATCTCTCAACGTGTGCACGATCAATTTCTCAAATCTATCCGTTACTGAGGCAACAAGCTGCCGTTGGATTTTATAGGCCTCCAGGTATGGCACAGTTTTTGGCTTCCCCCTCGTTTTATCCAGCTGCTGGATGAGGGCGTTGAAGCAGAGCTCTGCGTTGACGTTGGAGCGCGCCGACGTCTCTATTAGCAGCAGGTTCTTCTTGCTGGCGACAAAGGCCTGCAGGTCCCTCAGGTGCTGCTCCACAAACTCATCACATTTTGTGGCAGCGACGACAATAGGCTTCTTTGACTTGATGATTTGGGAGTAGAGGCTGTTGACAAACTTCATTTGGTCGTCAAACTTCCTGTTGCAACCCTTGCTAACATCGATGCAGAGCACAAAGCCATCGATGTTCAGCTTCCCGTCGGGCATCTGCTTCTGGTCAAAGTCCTGCTCCAAGCCCAGCTGGTCCGTGCAGATGTACATAAGCTTCTCTGCCGACTGGAGCTTGGTCGATGCTGCCCGTTTGGTGTACGGCTGCAGGTTCGTACTCCGATGCGGAAGAAACGTCTGGTCATCAATGAACTCCGTTTGTTCGATGACTTGTATTTTACAGTCCAACCCATCGTCCCCTCTATGGGACACCTCCCCCCAGTACAGGAAGTGGTCATTGTTGACCACGCGTCCCCCAAAGTCTATTGTGCTCAGCACCGAGGTGTGCTCCGAGTAGTAGTTGTCCGCATTGGGACGAATATATCGGTTGCATAGGCAGGACTTGCCAACGCCACAAtttcccttctctttctccGTTCCCGAGAGGCCAACCACACTGACGGCGAATGATGGGGGGCGCGCATCCTTGTTCTTGGCCATTATATCCCCCCGCTCATCGCTAACTTGGTCACTTCCAGTAAAACAGGTCAAGATATCATTCCAGTTCTGCTTGTTAGACGTACAGAGGCACATTCATCCTGATTTCCCCTCGGTAGTGGTGAATCCCCTCCCAACTCAATCTCTCTCTCGCAGTTTCTATCCTGGGTCTTCTTTAAGCTGGGATAGAACAGCCGGCTTCTCCTTTTATCACCTGC

Function

symbol description
arhgap5 Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within signal transduction. Orthologous to human ARHGAP5 (Rho GTPase activating protein 5).

NR:

description
PREDICTED: rho GTPase-activating protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280713 True 3943 TUCP 0.54 1 31975818 31979760

Neighbor

gene id symbol gene type direction distance location
LOC120549706 NA coding downstream 998860 30971115 ~ 30976958 (-)
LOC120549705 NA coding downstream 1007738 30961020 ~ 30968080 (-)
ankrd6a NA coding downstream 1015525 30944479 ~ 30960293 (-)
LOC120549749 LOC103370732,LOC104968329,LOC104928167 coding downstream 1036415 30931136 ~ 30939403 (-)
LOC120548738 jkamp coding downstream 1187961 30777804 ~ 30787857 (-)
LOC120549825 afg3l2 coding upstream 707970 32687730 ~ 32690913 (-)
LOC120548945 NA coding upstream 981518 32961278 ~ 32964049 (-)
foxg1a foxg1,LOC106934576,LOC103147766,LOC102223528 coding upstream 1323991 33303751 ~ 33305439 (-)
sptbn5 NA coding upstream 1343847 33323607 ~ 33460847 (-)
LOC120549249 LOC103353941,LOC101078900 coding upstream 1528848 33508608 ~ 33524752 (-)
G207326 NA non-coding downstream 9655 31965862 ~ 31966163 (-)
G207318 NA non-coding downstream 16018 31959273 ~ 31959800 (-)
G207313 NA non-coding downstream 50390 31888209 ~ 31925428 (-)
G207311 NA non-coding downstream 127567 31847775 ~ 31848251 (-)
G207298 NA non-coding downstream 235952 31739399 ~ 31739866 (-)
G207328 NA non-coding upstream 2075 31981835 ~ 31982148 (-)
G207329 NA non-coding upstream 6284 31986044 ~ 31986666 (-)
G207330 NA non-coding upstream 28585 32008345 ~ 32008618 (-)
G207331 NA non-coding upstream 30505 32010265 ~ 32010509 (-)
G207333 NA non-coding upstream 40949 32020709 ~ 32020980 (-)
G207202 NA other downstream 792263 31183023 ~ 31183555 (-)
LOC120549387 NA other downstream 1272540 30681927 ~ 30703278 (-)
G206919 ccdc88c other downstream 2041252 29934262 ~ 29934566 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other downstream 3771370 28046205 ~ 28204448 (-)
LOC120549840 NA other downstream 3941066 28012039 ~ 28034752 (-)
G207670 NA other upstream 629775 32609535 ~ 32691885 (-)
LOC120549602 klhl18,LOC102789664 other upstream 694193 32673953 ~ 32681902 (-)
LOC120548944 npas3 other upstream 879799 32859559 ~ 32932010 (-)
prkd1 prkd1,LOC107391660 other upstream 1014598 32994358 ~ 33078319 (-)
G207741 NA other upstream 1090501 33070261 ~ 33070727 (-)

Expression


Co-expression Network