LOC120549602 (klhl18,LOC102789664)


Basic Information

Item Value
gene id LOC120549602
gene name klhl18,LOC102789664
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 32673953 ~ 32681902 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU281218
GCCGCCGCTGACGATGGGAGACGTTCTCTGCGAAGAGCTCGAGGATCTGGTCCACTTCTCGGTGCCCGACCTGCCGGCGCGAGGCTACGTCGTGATGGAGGAGATCCGCCGCCAGGGGAAGCTCTGCGACGTCACACTCAAGgttGGGGATCATAAGTTCAGCGCCCACCGGATCGTGCTGGCGGCGTCCATCCCCTACTTCCACGCCATGTTCACCAACGACATGGTGGAGTGTAAACAGGACGAGATCCTGATGCAGGGCATGGACCCCA
>XM_039786621.1
ATGTGTCCGTGTAGTACGGCGGCCCGCAGGGATCAGTCCGCTCCGCCGCCGCCGCTGACGATGGGAGACGTTCTCTGCGAAGAGCTCGAGGATCTGGTCCACTTCTCGGTGCCCGACCTGCCGGCGCGAGGCTACGTCGTGATGGAGGAGATCCGCCGCCAGGGGAAGCTCTGCGACGTCACACTCAAGgttGGGGATCATAAGTTCAGCGCCCACCGGATCGTGCTGGCGGCGTCCATCCCCTACTTCCACGCCATGTTCACCAACGACATGGTGGAGTGTAAACAGGACGAGATCCTGATGCAGGGCATGGACCCCAG

Function

symbol description
klhl18 Orthologous to human KLHL18 (kelch like family member 18).

NR:

description
PREDICTED: kelch-like protein 18 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281218 False 272 TUCP 0.62 2 32673954 32681855
XM_039786621.1 True 320 mRNA 0.63 2 32673953 32681902

Neighbor

gene id symbol gene type direction distance location
LOC120549706 NA coding downstream 1696995 30971115 ~ 30976958 (-)
LOC120549705 NA coding downstream 1705873 30961020 ~ 30968080 (-)
ankrd6a NA coding downstream 1713660 30944479 ~ 30960293 (-)
LOC120549749 LOC103370732,LOC104968329,LOC104928167 coding downstream 1734550 30931136 ~ 30939403 (-)
LOC120548738 jkamp coding downstream 1886096 30777804 ~ 30787857 (-)
LOC120549825 afg3l2 coding upstream 5828 32687730 ~ 32690913 (-)
LOC120548945 NA coding upstream 279376 32961278 ~ 32964049 (-)
foxg1a foxg1,LOC106934576,LOC103147766,LOC102223528 coding upstream 621849 33303751 ~ 33305439 (-)
sptbn5 NA coding upstream 641705 33323607 ~ 33460847 (-)
LOC120549249 LOC103353941,LOC101078900 coding upstream 826706 33508608 ~ 33524752 (-)
G207682 NA non-coding downstream 24313 32646697 ~ 32649640 (-)
G207680 NA non-coding downstream 42540 32622841 ~ 32631413 (-)
G207675 NA non-coding downstream 45585 32565757 ~ 32628368 (-)
G207677 NA non-coding downstream 64662 32590907 ~ 32609291 (-)
G207679 NA non-coding downstream 71941 32601227 ~ 32602012 (-)
G207688 NA non-coding upstream 25027 32706929 ~ 32707623 (-)
G207698 NA non-coding upstream 67228 32749130 ~ 32802824 (-)
G207691 NA non-coding upstream 70937 32752839 ~ 32753257 (-)
G207687 NA non-coding upstream 76295 32758197 ~ 32821281 (-)
G207684 NA non-coding upstream 108967 32790869 ~ 32817393 (-)
G207327 arhgap5 other downstream 694193 31975818 ~ 31979760 (-)
G207202 NA other downstream 1490398 31183023 ~ 31183555 (-)
LOC120549387 NA other downstream 1970675 30681927 ~ 30703278 (-)
G206919 ccdc88c other downstream 2739387 29934262 ~ 29934566 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other downstream 4469505 28046205 ~ 28204448 (-)
LOC120548944 npas3 other upstream 177657 32859559 ~ 32932010 (-)
prkd1 prkd1,LOC107391660 other upstream 312456 32994358 ~ 33078319 (-)
G207741 NA other upstream 388359 33070261 ~ 33070727 (-)
G207742 NA other upstream 412283 33094185 ~ 33149293 (-)
G207802 NA other upstream 809671 33491573 ~ 33498532 (-)

Expression


Co-expression Network