G207728


Basic Information

Item Value
gene id G207728
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 32958695 ~ 33038026 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU281270
acacagagacagacagagacacacacacacacacacacacacacagagacagcgcacacacacacacacagagacacacacacagacagacacacacacacacagacagacagacagacagacacacacacacacacagagacagacacacacacacagagacagacacacacacacacacacagacagagagacagacacacacacacagagacagacagacacacgcagacacacacacacacacacacagagacagacagacacacgcacacacacacacacacacacagagacagacagacacacatacacacacacacacagacacacacacacacacacagagagacagacagacggacacacacacagacaccgactcacacacagacagacagacagacagagacatacacacacacacacacacacacagacggacacagacatacatacatagagagACGCAAACACAGAAACGATACCTCCATACCActggttctcaagcttttttcaacaatgttccccctttgaacagttgtttttaagccatgtagCCCCGTAACCAGCGCTaataatttttggtagaaaagaaaagtctctataaagaggaagattacagcgatgtcagcgatgGATTTACTAAACgacagccttggacctggaacacatttacatgatgatggagaaaggagagaaaaactTGGGAAAAGacggaagtaaggcaagaataggtcgaaaatagaaacaaaaactctgaaaaaaacacagaagaaagaaggaaggcagcactagggcgacaaaagtgacaacaaatttaaataagcgacaaacttagaaaaaaaactttgaaaaaagctgaaaaaaacatgagacaaaaaaaaagttgaaaaaagtaatgaaaggCAAGAATAAgtcaaaacaaacgacaaaaccttccaaaaaaaaggtgacaaacttcaaaaacttaaaaaaaaaagcgacaaacttggagaaaataaagacagtagaagtaactacagccttggaactgaaaaccattttgcaaaaaatgtcacgtaccccctgcagtcctacagagtacccctagggggacagggaccccctgcagtcctacagagtacccctagggggacagggaccccctgcagtcctacagagtacccctagggggacatatACCCCctgcagtcctacagagtacccctagggggacatataccccctgcagtcctacagagtacccctagggggacagggaccccctgcagtcctcaaagtacccctagggggacatgtacccccatttgagaaccaGTGGGTTAGAGGGTCAGGAACAAACACCTCATATCGTGGAATGGTTTGGAGGCCTCGTTGCAAGatgaaaggtttaaaaaaaaaatctaatttaggactggaggggctgtcctgtgTGAGGAAGGTCCCAGGTGTACTCCTGGTGTGTAAAACGTGTCGGATGAACAGTCTTCTGTGCGTTTTGAGCTCCGTATTAGCGGAGGAGTGGCTCCTCTGACTGACTGTGTTACTCTCCCGGTGTCCGTGTTTCTGATTGGTCGACTGATTCTTCTCTGGCTTCACTCCTCTGGCTTGTGTCTGTGCCTCAAGTGCTCACAAAGTGTTCGCTACCTGcagaaaatctttaaaaaaaatgtatttttttctggatcatgtttaaataaagatattttaaAGTCAA
>TU281283
gagaaggtgtgtccaaacttttggcctgtactgtagatagTTCAGATATGGCCTAAATACAAGTTATAGAATGATCAAATAGAATAGGATGATAATATACTTcagtaggaaggcattcggaaatgtgaACAGATGAGCTCATCAGCGCACAGGTTAACACAGGCgagcacctacataataagcttttttaaattaaaaaatgttcttATCGCGCTGATGCCAACCGAGCCCGACCAGAACCTgaacataatttctaaatatgtgTCTGAACTCGGCCCGGCCGAAGTctgggtatccatcctctatccTCTAACCAAattccctacgcggattttcaaTCCTtccatactactcgctacagcgTCAATTCATACGCTaccgcaaggtaatgtaagtgaATGGAGGCATAACAgagttgataaacacgctaaaaagcgagtatgcgtcttgataacacgccaattaTGGCGTGCGAATTGGCGTGtcgtacatacgccacttcatgagctCAGTCTGGCAGATGACTGGAAGTTAAAGAGCTCTCAATGCCTCTTTTAACAGAAAGTTAAGCGACTGACTGTCTTGATACTGAAttgagctaacgctagcttgtgtcaggtaaagtattttttattatagtcGTTAGTTACATAGCCGAAAGATGCCGAAAATGTTTGTGATGTGTGCGGGCTGAACTTAGCATCCTGGAGTGCGGCTGCTTGAGGCGGTGTGAAAAATGTAAACTTCAAAGCgtaattaaaaatgtttacagcctggtatCAACAAAGGGTTTTTCTGTCTATGTACAGGACAAGTCTTTcaaccagtcctccaaaccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacagacacacacacacacacacacacacacacagagacagacacacacacacacacacacagacacacacacacacacagagacagacacacacacacagagacagacacacacacacacacacagacagagagacagacacacacacacagagacagacagacacacgcagacacacacaaacacacacacagagacagacagacagacacaaacacacacacagagacagacacacacacacacagagacagacacacacacacacacacacacagagacagacacacacacagacacacaaacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281270 True 1720 lncRNA 0.45 5 32979877 33038026
TU281283 False 1235 lncRNA 0.45 3 32958695 32982724

Neighbor

gene id symbol gene type direction distance location
LOC120549825 afg3l2 coding downstream 267782 32687730 ~ 32690913 (-)
LOC120549706 NA coding downstream 1981737 30971115 ~ 30976958 (-)
LOC120549705 NA coding downstream 1990615 30961020 ~ 30968080 (-)
ankrd6a NA coding downstream 1998402 30944479 ~ 30960293 (-)
LOC120549749 LOC103370732,LOC104968329,LOC104928167 coding downstream 2019292 30931136 ~ 30939403 (-)
foxg1a foxg1,LOC106934576,LOC103147766,LOC102223528 coding upstream 265725 33303751 ~ 33305439 (-)
sptbn5 NA coding upstream 285581 33323607 ~ 33460847 (-)
LOC120549249 LOC103353941,LOC101078900 coding upstream 470582 33508608 ~ 33524752 (-)
coch coch,LOC102779905 coding upstream 556042 33594068 ~ 33623644 (-)
LOC120549318 LOC104924818,LOC103353924,LOC102795936,LOC101485054 coding upstream 1202800 34240826 ~ 34256495 (-)
G207726 NA non-coding downstream 36043 32920745 ~ 32922652 (-)
G207685 NA non-coding downstream 110783 32845885 ~ 32847912 (-)
G207687 NA non-coding downstream 137414 32758197 ~ 32821281 (-)
G207684 NA non-coding downstream 141302 32790869 ~ 32817393 (-)
G207698 NA non-coding downstream 155871 32749130 ~ 32802824 (-)
G207739 NA non-coding upstream 23953 33061979 ~ 33542901 (-)
G207740 NA non-coding upstream 26644 33064670 ~ 33080983 (-)
G207747 NA non-coding upstream 112255 33150281 ~ 33254663 (-)
G207749 NA non-coding upstream 134104 33172130 ~ 33172563 (-)
G207750 NA non-coding upstream 139369 33177395 ~ 33177727 (-)
LOC120548944 npas3 other downstream 26685 32859559 ~ 32932010 (-)
G207670 NA other downstream 266810 32609535 ~ 32691885 (-)
LOC120549602 klhl18,LOC102789664 other downstream 276793 32673953 ~ 32681902 (-)
G207327 arhgap5 other downstream 978935 31975818 ~ 31979760 (-)
G207202 NA other downstream 1775140 31183023 ~ 31183555 (-)
G207741 NA other upstream 32235 33070261 ~ 33070727 (-)
G207742 NA other upstream 56159 33094185 ~ 33149293 (-)
G207802 NA other upstream 453547 33491573 ~ 33498532 (-)
ehd4 LOC107391916,LOC105938093,LOC106527300,LOC102223325,LOC103156172,LOC103382107,LOC101073507 other upstream 494461 33532487 ~ 33647324 (-)
G207808 NA other upstream 495451 33533477 ~ 33611751 (-)

Expression


Co-expression Network