ehd4 (LOC107391916,LOC105938093,LOC106527300,LOC102223325,LOC103156172,LOC103382107,LOC101073507)


Basic Information

Item Value
gene id ehd4
gene name LOC107391916,LOC105938093,LOC106527300,LOC102223325,LOC103156172,LOC103382107,LOC101073507
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 33532487 ~ 33647324 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU281419
cattacacacacacacacacacacacacagaggaggCAGTGTGTTCAGAGCAGGAGAGACTCCCAGGTGtcaaacacgcacacgcacgctcGCTCAGTGTGAAGGACGAACTGCGCGAGAAGGAGACGAAAACAACCGGAACATTTGGAAATATCGAAACAGGGAAGTTGGAATCGAGCGTGTCGGTGTCAGCGGTGGAGAAGTGCCGTCGGCAGCATGTTCAGCTGGGTCAAACAGGAGCAAGGTGGACGCAACAAGGAAGGAGAGATGTACCAGACGGTGACGGAGGGTCTCCAGAGCCTCTACCTCAAGAAGCTGCTGCCGCTGGAGGAGACCTACCTCTTCCATGACTTCCACTCCCCGGCCCTGGAGGCGGCCGACTTCCAGAGCAAGCCCATGGTGCTGCTGGTCGGCCAGTACTCCACCGGGAAAACCACCTTCATCAGGTAGCT
>XM_039785994.1
caaaaaaaacacacagaggaggCAGTGTGTTCAGAGCAGGAGAGACTCCCAGGTGtcaaacacgcacacgcacgctcGCTCAGTGTGAAGGACGAACTGCGCGAGAAGGAGACGAAAACAACCGGAACATTTGGAAATATCGAAACAGGGAAGTTGGAATCGAGCGTGTCGGTGTCAGCGGTGGAGAAGTGCCGTCGGCAGCATGTTCAGCTGGGTCAAACAGGAGCAAGGTGGACGCAACAAGGAAGGAGAGATGTACCAGACGGTGACGGAGGGTCTCCAGAGCCTCTACCTCAAGAAGCTGCTGCCGCTGGAGGAGACCTACCTCTTCCATGACTTCCACTCCCCGGCCCTGGAGGCGGCCGACTTCCAGAGCAAGCCCATGGTGCTGCTGGTCGGCCAGTACTCCACCGGGAAAACCACCTTCATCAGgtttaTCTGCTCTCAGATGCCCAATCAGGTTCTTCAGAGCATCAGCATCATCGACACGCCCGGTATCCTGTCAGGAGAGAAGCAACGGATCAGCAGagGCTACGACTTTGCGGAGGTCCTGCGTTGGTTCGGCGAGCGGGTGGATCGGATCATTCTGCTGTTCGACGCTCACAAACTGGACATCTCAGACGAGTTCTCCGAAGCCATCCGAGCCTTCAAAGGCCAAGATGACAAGATCAGAGTGGTGCTCAACAAGGCCGACCAGGTGGACACGCAGCAGCTGATGCGGGTGTACGGCGCCCTCATGTGGTCGCTGGGGAAAGTGATCAACACGCCCGAGGTGGTGAGAGTTTATCTGGGCTCCTTCTGGGCCAAACCCCTGCAGAACTCCGAGAACAGGCGTCTGTTTGAGGCGGAGTCTCAGGACCTGTTCAAGGACATCCAGAGTCTCCCGAGAAACGCAGCGCTGCGTAAACTCAACGACCTCATCAAGAGAGCGAGGCTGGCCAAGGTGCAGGCGTACATCATCAGCTACCTGAAGAAGGAGATGCCGTCTCTGTTCGGgcgggagaagaagaaggaggagctGATCATGAGGCTGCCGGAGATCTACACCATCCTGCAGAGAGAGCACCACATCAGCCCCGGAGACTTCCCCAGCGTCACCAAGATGCAGGACATGTTGCAGCACTACGACTTCAGCAAGTTCCCGTCTCTGAAGGTGAAGCTGGTCGAGTCGGTGGACAAGATGTTGGCCACGAAGATCGCCGGTCTGATGTCGATGATCCGCGACGAAGAGTCCAAGCTGCCGCCGCCGATGGTGTCCGGCGGCGCCTTCGAGGGCTCCCAGGACGGGCCCTTCGGCCACGGCTACGGCGAGGGCATCAGCGCCGGCGCCGACGCCGAGGATTGGATAATCGGCCGCGAGAAGCACCGCTACGACGAGATCTTCTACATGCTGATGCCCATCAACGGCAAGATCACCGGGGTCAACGCCAAGAAGGAGATGATGAACTCGCGGCTGCCCAACACCGTGCTCGGCAAGATCTGGAAGCTGGCCGACTGCGACAAGGACGGCATGCTGGACGACGAGGAGTTCGCCCTGGCGCAGCATCTCATCAAGATCAAACTGGAGGGATACGAGCTGCCGGCCGAGCTGCCCGAGCACCTGGTGCCCCCGTCCCACCGCAAAAACCCCACCGCCGACGCCATGTACAACCACAGCGAGGACTAGGGGGGGGCGGCAGCCGCCAAAGTTGGCGCCGTTTACcggccaaatgctggtgaaatgtGCAGGTGGCTGGTAGGGTTGGTAGGGGTGTAAATCACAAGTTTTATCACGATACCATCAGTCGATTCTATGGACAACGATACCATATTTGAGGATATATTTAAAGCCCATttaaatcagacacacacacacacacacatgcagacacacacacacacacacatgcagacacacacacacacacacacacacatgcagacacacacacacacacatgca

Function

NR:

description
EH domain-containing protein 4-like

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005509 calcium ion binding molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281419 False 452 TUCP 0.57 2 33581024 33647324
XM_039785994.1 True 1942 mRNA 0.57 7 33532487 33581461

Neighbor

gene id symbol gene type direction distance location
LOC120549249 LOC103353941,LOC101078900 coding downstream 7735 33508608 ~ 33524752 (-)
sptbn5 NA coding downstream 71640 33323607 ~ 33460847 (-)
foxg1a foxg1,LOC106934576,LOC103147766,LOC102223528 coding downstream 227048 33303751 ~ 33305439 (-)
LOC120548945 NA coding downstream 568438 32961278 ~ 32964049 (-)
LOC120549825 afg3l2 coding downstream 841574 32687730 ~ 32690913 (-)
LOC120549318 LOC104924818,LOC103353924,LOC102795936,LOC101485054 coding upstream 593502 34240826 ~ 34256495 (-)
LOC120549317 LOC103353926 coding upstream 614883 34262207 ~ 34273793 (-)
LOC120549319 NA coding upstream 722526 34369850 ~ 34370808 (-)
LOC120549830 NA coding upstream 744541 34391865 ~ 34392773 (-)
LOC120549861 NA coding upstream 1057377 34704701 ~ 34712707 (-)
G207794 NA non-coding downstream 44067 33478983 ~ 33488420 (-)
G207776 NA non-coding downstream 85528 33366397 ~ 33446959 (-)
G207788 NA non-coding downstream 96844 33435219 ~ 33435643 (-)
G207781 NA non-coding downstream 156293 33373384 ~ 33376194 (-)
G207778 NA non-coding downstream 156687 33367058 ~ 33375800 (-)
G207817 NA non-coding upstream 38248 33685572 ~ 33686916 (-)
G207824 NA non-coding upstream 57656 33704980 ~ 33705588 (-)
G207826 NA non-coding upstream 59845 33707169 ~ 33709487 (-)
G207828 NA non-coding upstream 63668 33710992 ~ 33711616 (-)
G207841 NA non-coding upstream 126615 33773939 ~ 33821877 (-)
G207802 NA other downstream 33955 33491573 ~ 33498532 (-)
G207742 NA other downstream 383194 33094185 ~ 33149293 (-)
prkd1 prkd1,LOC107391660 other downstream 454168 32994358 ~ 33078319 (-)
G207741 NA other downstream 461760 33070261 ~ 33070727 (-)
LOC120548944 npas3 other downstream 600477 32859559 ~ 32932010 (-)
g2e3 g2e3,LOC102781532 other upstream 62539 33709863 ~ 33731941 (-)
strn3 strn3 other upstream 119612 33766936 ~ 33884726 (-)
G207842 NA other upstream 176310 33823634 ~ 33826433 (-)
hectd1 hectd1,LOC102302438 other upstream 183863 33831187 ~ 33904023 (-)
LOC120549293 NA other upstream 273522 33920846 ~ 33924493 (-)

Expression


Co-expression Network