LOC120548738 (jkamp)


Basic Information

Item Value
gene id LOC120548738
gene name jkamp
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 30777804 ~ 30787857 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785175.1
CTCATTTTCGTCCACATCCGGTTTGCTTAACAGCTGACTGACAAGTGAAAATACTGTAGGACTGAGGCGAGAAACCttgttttaaaacattattGGGCACAGAATGGCTGTGGCCATGAGTTTAACGTGCCCAGGCACATACTGTGGCAGGATGATGGTCAATGGATCAGTGGAGGGAGAGTGTGGCGTTTGTCCTCGAGGAGAGCGGGCCAACCACCAGAATGTGTGCCAACGCTGCACTGAATCCCCCGAGCTCTACGACTGGCTCTATCTGGGCTTCATGGCCATGTTGCCCTTAGTGCTGCACTGGTTCTTCATCGAGTGGTACTCTGGAAAGAAGAGTTCCAGCGCTCTGCTGCAGCACATCACAGCCATGTCGGAGTGCAGCGTGTCGGCCGTGGTCACCTTGCTGGTCACGGAGCCGGTGGGGGAGCTCAGCATCCATTCCTGCCGAGTCCAGATGCTGTCAGACTGGTACACCATGCTCTACAACCCCAGCCCGGACTACGTCAACACGCTACACTGCACGCAGGAGGCCGTCTACCCGCTCTACACCATCGTGTTAATCTACTACGCCTTCTGCCTGGTGCTGATGATGCTGCTGCGTCCTCTGCTGGTGAAGAAGATAGCGTGCGGCCTGGGCAAGTCGGATCGCTTCAAGAGCATCTACGCTGCCCTGTACTTCTTCCCCATCCTCACGGTGCTGCAGGCGGTGGGCGGAGGACTGCTCTactATGCGTTTCCCTACATCATACTGGTCCTGTCTCTGGTCACACTGGCTGTTTACATGTCTGCCTCGGAGATACAGTCCTTTAAGAACCTTGTCACTAAGAAGAAGCGTCTGGTGGTCCTGTTCAGCCATTGGCTGCTCCACGCGTACGGCATCATCTCTATCTCCCGATTGGACAAGCTGGAGCAGGACCTGCCGCTGTTGGCCCTCGTGCCCGGTCCCGCCCTCTTCTACATCGCCACCGCCCGGTTCACTGAGCCCAGTCGCATCCTGTCGGAGGGCGGCAACGGACACTGACATTGTTGACCGACCAATCAAACATCGCTAAAGTTTTTACAAACGTCTCCGGTGCCAACCTTCAGCTCCTCCCACCGAGAGGTGGGGCTTCAGTGTCGGGGTTAATGCCATCAAACGTGCTCaatggtcataaagggatgacATCACGAAGTGCAATATTTAACATTGGGGAAACAACTTCATCATCTGCTCCAAATGGTGTGCAAGTATATAAGTGGGGCTGCGACTCACGATTATTTTCATCggcgattaatctgtcgattatttttttcGATTCATCTATTAGTTGTTgctctgtaaaatgtcagaaaatggtttaAAACATGTGGACCAGTGTTTCCCAGAAGCCCAAGGTaaaacgtcctcaaatgtctcgttttgtccacaactcaaaagacattcagtttactgtctaGAAACTAAAACTAgaacatgttcacatttaacaagctggaatcagtttgacttttatttcttcgtaaaaaaaaatgacgcttaatcgattatcaaaatagctggCGATTAATAGTTGACAACGAAGTATATTAATAGTTATATTAAAAGTTGGACAATAGGTGATAAACTACTCCAGGTTTGGTCCAGTCAGGATTTCTGAACAGGACTGATGGTCTGGGATCTGTTCCCAGATCAGTCGAGTCCGCTGAAGGCCGACTTCATGAAGTCATTTAACACTACATCTTCCTGTTGGAGTAGGACTCCGTGCTAACGTTCAGAGTGCTCGTACAACTCttcacatttcatttcattcatggTTTCAACTCCTGATTCTAGTAGACCAATcagggttcaacaataaggCCCGGGGCAAGTTAAACGCCACTTTGGGCCAGTAAAGTAACAACCCACTCATCGTATCATAAATCATTTGATTTGAATCTGCCATTGGCCAATCAGGAATTGAGTTGGCACTTGatgctttttacatttttttttttttaaattttttcaacGTTTGTTACACTTTTGATGTAACGcttttgacatttatttttgaccattttttttatttattttttttgtccacattttttataaagatttagt

Function

symbol description
jkamp Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in ubiquitin-dependent ERAD pathway. Predicted to act upstream of or within response to unfolded protein. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human JKAMP (JNK1/MAPK8 associated membrane protein).

NR:

description
PREDICTED: JNK1/MAPK8-associated membrane protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785175.1 True 2092 mRNA 0.47 7 30777804 30787857

Neighbor

gene id symbol gene type direction distance location
lrit3b lrit3,LOC102193314,LOC102307793,LOC101466384,LOC105919025 coding downstream 16962 30750231 ~ 30760842 (-)
LOC120549389 enpep coding downstream 34102 30714803 ~ 30743702 (-)
LOC120549895 gnpda2,LOC104934428 coding downstream 80558 30689978 ~ 30697246 (-)
gabrb1 gabrb1,LOC103364303,LOC108247011,LOC106600539,LOC106926079 coding downstream 206052 30500242 ~ 30571752 (-)
atp10d atp10d coding downstream 296040 30422939 ~ 30481764 (-)
LOC120549749 LOC103370732,LOC104968329,LOC104928167 coding upstream 143279 30931136 ~ 30939403 (-)
ankrd6a NA coding upstream 156622 30944479 ~ 30960293 (-)
LOC120549705 NA coding upstream 173163 30961020 ~ 30968080 (-)
LOC120549706 NA coding upstream 183258 30971115 ~ 30976958 (-)
LOC120549825 afg3l2 coding upstream 1899873 32687730 ~ 32690913 (-)
LOC120549477 NA non-coding downstream 279512 30496770 ~ 30498292 (-)
LOC120549085 NA non-coding downstream 290299 30484785 ~ 30487505 (-)
LOC120548652 NA non-coding downstream 432398 30332529 ~ 30345406 (-)
G206966 NA non-coding downstream 584094 30193173 ~ 30193710 (-)
G206958 NA non-coding downstream 679069 30097563 ~ 30098735 (-)
G207104 daam1,LOC103373422 non-coding upstream 44686 30832543 ~ 30833569 (-)
G207145 NA non-coding upstream 80787 30868644 ~ 30942703 (-)
G207175 NA non-coding upstream 246939 31034796 ~ 31035354 (-)
G207203 NA non-coding upstream 387455 31175312 ~ 31177564 (-)
G207204 NA non-coding upstream 399518 31187375 ~ 31187646 (-)
LOC120549387 NA other downstream 74526 30681927 ~ 30703278 (-)
G206919 ccdc88c other downstream 843238 29934262 ~ 29934566 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other downstream 2573356 28046205 ~ 28204448 (-)
LOC120549840 NA other downstream 2743052 28012039 ~ 28034752 (-)
G206198 fbxo33,LOC102800092 other downstream 3952740 26821688 ~ 26825064 (-)
G207202 NA other upstream 395166 31183023 ~ 31183555 (-)
G207327 arhgap5 other upstream 1187961 31975818 ~ 31979760 (-)
G207670 NA other upstream 1821678 32609535 ~ 32691885 (-)
LOC120549602 klhl18,LOC102789664 other upstream 1886096 32673953 ~ 32681902 (-)
LOC120548944 npas3 other upstream 2071702 32859559 ~ 32932010 (-)

Expression


Co-expression Network