LOC120548959


Basic Information

Item Value
gene id LOC120548959
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 34723951 ~ 34759573 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785462.1
ATGACTGTTCATTTGTTTGGTGCAATATCATCGCCCAGCTGTGCCAGTTTTGCCTTAAGAAAGACTGCTGACGACAACAGAGAAGAATTCCCAGCACATGTGATCAACACCATCAAGCAGAACTTTTATGTAGATGACTGCTTGAAATCCATGCCTTCAGAGGCAGAATCCATTGCATTGGTGGGAAACCTGACAGCTGTATGCCAGTCGGGAGGGTTTCAGTTGTTAAAATGGGTCAGCAACAGTCGATCAGTGTTGGAGTCCATTGATGTAGAGAAAAGAGCCAAAGAAATGAAAGGACTGGATTTCGACAGGGACAATCTCCCTGTGGAGAGAACATTGGGACTGCAATGGGTAGCGTCACACAGAGAACCCAACGGCCGGGATAGAGCTGAGGGCGCGTGTGCTCCAGCTTGCCTGAGTGCGAGCTGCCGGCTGGGctgtgtgtgttcctctctGGCCCAGGCGTCCCGGGACGGCCAGGCGTCCCGGGGGGGCCACTGCGGGCGCCCCCCCTGCATGTTCGGCTGCAGCTGCCTCAAACAGAAGGTGGTGCTGCTGAAGAACCTGGACGGGTCGGACTCCAGCCCCGGGCACACCGGGCCCggcaggaagaggaagaggaagaggaggatgaagatggcCTACGtCCTGAAGGAGGCGGACAGCGTTTCCCAGCCTGCCGAGCGGGTCCGCACCCTGTGGACGAGAGGAGACCCCGACCCAGACCCGATCCACGCTCCCAGACCTGCAGCCTCGCCCCACCGCGCCaggagagagcgcAGCTGTGCCAGAGTCCGAGCGTtcaaagagaggaagaagaagaagaggaaacaGATTCTCCAGGAAACCCCAACGGAGACGCCTGAACACGTGAAGCATCCTGAAGTCGTCCGGCTGAGATCTCTGAAGCAAAGAGACCTGACGCTGAAGGACTCAAAGCCCACACCCTCCACTCCTCtatcagCAGTCGGTCCGGTTCCCTCAGTTCCTCCGGTTCCTCCGGTTCCCTCGGTTCCTCCGGTTCCTCCGGTTCCCCCGGTTCCTCCGGTTCCTCCGGTTCCCCTGGCCGATCCGGCCCCGAAGCCGTCCAAGCGCCTGGTGATCGTGGCGGACTGTAAGTGGGTGAGCGATGGCGACCGTAACCACGTGTTGAAGCAGCTGTGCGAGGCGATGGCTCGCGACCGTCTGGACCAGGCCTTCTGGATCGGAGACTACTTGATCAGCCCGCTGGCCCAGACCGTGGAGCAGAGCGGCGCCGAGCGGTGCATCCACTACCGGATGCACATCTCCAGACCCAAACTGGAGCGGGAGAAACCTGCCAGGCCGGTGAGGGCGCCGCCGGCGAGGAAACAGGAGGACACGGAACAACAGAAGGTGGACATGGAGGCGGAGCCTCTGGAGGACTGGCAACGGGAGGTGGAAGAAgacgaagaggaagaggaaggggcggAGCCTCTGGAAGACTGGCAGCGAGAAGTGGAGGAAGACGActtggaggaggaagaggaggcggaGCCAACAGGGCCCCAGGTGCATGAtgggagagagagcagcaggacGGAGATGGCGAGGATGGGTCTGCCGTTCCTCACCGGAGTCTCCCCCACTGGCTTCCTCTCGGCCAATAGGAAGCAGCCAGGCGGAACAGACCACCTGGTCCAGgtgaatgGGAAGCTGTATCCGCTGGCGAAGATCCAGTTGGGGAGGATGGGGGCACTCCATCCGGCCAATCGGCTGGCAGCGTACCTGACGGGCCGGGTGGGCTCCAACAGGAAGCAGCCGACCCCCCCGGCCCCCCCACCCAAACCTCCACCGTCTGTCACCGTGCTCACCCTCCCAACCTCCCCCAcagtgCTCCCGCCTGCAGCTGTGAAGGTCGACCAATCAGCTGCGAGCTCTGAGCGGTCTGCAGGCGAAGGCCCTGAGGGGGCGGGGCCCCGCATGGTCACAGTGAGGCTGTACCCATCTCTGATGGGGGGGAGGAGTCAGATCAGGGTGGTACCCGCCAGTCCTGCTGGCTCCGCCCACCTTACAGACTCTCCTCCGGTGCCTGCGCCCCCTAAAAGCTCTCAGCTGTTGATGCTGCAGGTCCAGGGTGCCCCCGCCAAGCCTGCGCCCCCCCCAGCCCAGACCATGGTGCTGCAGCCCGTGCAGACGGCGTCCGGCGCCCAGTTCTACCGCAGACCGGACGGGAAGCTGGTCCAGCTGATCCCCATCAACCAGCTGAGACCAGTCAACACCGAGCCGTCCAATCACAGAGTCGTCCCCGGTTCCCTTCAGGCTCCAGTCGACCAAACGCCCCCGACCCCCGTCGCCACGGTAACCAAGGTAACCACGGTAACGCCCGCCTCCCTGTCCGGCTTGTCCGCCTTCTCCGTGTCCCCCCTGGCCGCCCCGCTGCACCCCCCGTCTGGCTTCCTGTCTCAGAAGGGCACGTGCACCTTTAAAATCCTTCCCTCGGACTCCAGCcgggaaccaatcacagtcacctGTCCCAGAGTTCCCGCCAAGACGCCGATACTGCCGCAGCCGCGAGCCCCCACCGTCATCCGCGtgccccccaccaccacctgcCGCCGCCACGCCGCTGAACCTCATCTCCCTCAAACCCTCAGCAGGCCGGGGGGCGGAGCTCGGAGTCAAAACGGTGGCTGTGGCTCCGCCCACTACTGCTGTGGCTCCACCCCCTACTGTTGTGGCTCCACCCCCTACTGCTGTGGCTCCACCCCCTACTGCTGTGGCTCCACCCCCTACTGTTGTGGCTCCACCCCCTACTGTTGTGGCTCCACCCCCTACTGCTGTGGCTCCACCCCCTACTGCTGTGGCTCCACCCCCTACTGCTGTGGCTCCACCCCCTACTgctgtggctgtggctcagtccCCTGCTGTGGCTGTGGCTCCGCCCCGTGCTGCTGTGGCTCCGCCCCTCCCGAAGGCCGAGCCTGCGTGCGCCCTGGTGGACCTGGACATCGTCTGCGTGGACGATGAGATGGAGCTGGTTGCCGCGGAGACGGCGGGCGTGGTGGACGTGCACGGGTCGAGCAGCGAGACGGAGAACTCGTCGGACTTCGGAGACGAGCTGGACGAAGACGAAGAGAAAGACAACCAAcgttaCCTTCACAACGTGCTGGAGAGGCAGAGGCGGGGGGAGATACGGAAGCTGTTGGATGCTCTGAGGAGAGAAGTCGGGCTGAGGGAGGAGAAGACCACGAAGATCTGCACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785462.1 True 3226 mRNA 0.63 12 34723951 34759573

Neighbor

gene id symbol gene type direction distance location
LOC120549861 NA coding downstream 11244 34704701 ~ 34712707 (-)
LOC120549830 NA coding downstream 331178 34391865 ~ 34392773 (-)
LOC120549319 NA coding downstream 353143 34369850 ~ 34370808 (-)
LOC120549317 LOC103353926 coding downstream 450158 34262207 ~ 34273793 (-)
LOC120549318 LOC104924818,LOC103353924,LOC102795936,LOC101485054 coding downstream 467456 34240826 ~ 34256495 (-)
LOC120548962 NA coding upstream 125448 34885021 ~ 34890823 (-)
jmjd7 jmjd7 coding upstream 316431 35076004 ~ 35084121 (-)
kiaa0586 NA coding upstream 334895 35094468 ~ 35142201 (-)
irf2bpl NA coding upstream 365641 35125214 ~ 35127556 (-)
LOC120549006 arid4a coding upstream 390091 35149664 ~ 35166022 (-)
G208272 NA non-coding downstream 1361 34721557 ~ 34722590 (-)
G208185 NA non-coding downstream 5188 34718110 ~ 34718763 (-)
G208190 NA non-coding downstream 5940 34686341 ~ 34718011 (-)
G208174 NA non-coding downstream 7295 34713415 ~ 34716656 (-)
G208178 NA non-coding downstream 36917 34528424 ~ 34687034 (-)
G208263 NA non-coding upstream 53216 34812789 ~ 34881659 (-)
G208266 NA non-coding upstream 72884 34832457 ~ 34869986 (-)
G208246 NA non-coding upstream 78130 34837703 ~ 34838605 (-)
G208285 NA non-coding upstream 83476 34843049 ~ 34850747 (-)
G208286 NA non-coding upstream 90623 34850196 ~ 34892103 (-)
mapkbp1 NA other downstream 21248 34612767 ~ 34702703 (-)
haus2 NA other downstream 261658 34455022 ~ 34462293 (-)
G207861 NA other downstream 614957 33973787 ~ 34108994 (-)
LOC120548953 NA other downstream 617834 33937398 ~ 34106117 (-)
G208221 NA other upstream 43370 34802943 ~ 34887617 (-)
LOC120548961 heatr5a other upstream 86364 34845937 ~ 34883690 (-)
G208252 NA other upstream 258941 35018514 ~ 35041631 (-)
LOC120549800 NA other upstream 447518 35207091 ~ 35281096 (-)
LOC120548685 LOC108250349 other upstream 525959 35285532 ~ 35303585 (-)

Expression


Co-expression Network