ppie (ppie)


Basic Information

Item Value
gene id ppie
gene name ppie
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 24491625 ~ 24495581 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785640.1
GCCAGAGGAAATGTGGTCGGGAGGCGGGCTTCAGCCTCATTGCACCAATGACAAGCTGAGGGGGTCAAAGTTGAAGGGTTAAATCCAATATGGCGGCTAACAAACGAGTGTTGTATGTTGGTGGCCTGGCAGAGGAGGTGGACGAGAAGGTGTTACATGCAGCTTTTATTCCGTTTGGAGACATCACTGACATCCAGATACCATTAGACTATGAAACAGAAAAGCACAGAGGATTTGCGTTCATTGAGTTTGAACTGGGAGAGGATGCTGCAGCAGCTATTGATAACATGAATGAGTCTGAGCTTTTTGGACGGACAATCAGGGTCAACACCGCCAAGCCCATGAGAATCAAGGAAGGTTCTTCTCGACCAGTGTGGTCGGACGATGACTGGCTGAAGAAGTTCTCAGGAAAGACCACAGAGGAGGCTGAGGGGGAAGCAGCAGCTGGAGAGACAACCAACACAGCAACagaggagGCTGAGCCCCCGGCTAAAAAGGGAAGAGTTAACCCTCAGGTCTACATGGACATCAAGATTGGAAACAAGGCAGCAGGGAGACTACGCTTCCTCCTTCGGGCTGACATCGTTCCCAtgacagcagAGAATTTCCGCTGCCTGTGCACACATGAGAAAGGATTTGGCTTTAAGGGCAGCAGCTTTCATCGCATCATCCCTCAGTTTATGTGCCAAGGAGGTGACTTCACCAACCACAACGGCACCGGTGGTAAATCTATCTACGGCCGAAAGTTTGATGATGAAAACTTTGTCCTCAAGCACACCGCGCCAGGGCAGCTCTCCATGGCCAACTCCGGGCCAAACACTAATGGCTCTCAGTTCTTCATCACCAATGACAAAACAGACTGGCTGGATGGCAAACATGTGGTGTTTGGAGATCTGGTGGAGGGTATGGATGTGCTCCGTGCAATGGAGgCTCAGGGAAATAAAGACGGCAAGACGAAGCAGAAAGTCATCATCTCTGACTGTGGAGAATATGTGTGAACGAAAAAGAATTGTgcttgtatgtgtatgtaccaTATGTGTCTATGGAGGCAGTGAATGTCGGAGAGTGTGTTCATGGTCTTTTGTACTTTGAGCCCATGTCATCTGCCATGTAAATATTTCAAtaaacttgtttttgttttataaagaaA

Function

symbol description
ppie Predicted to enable cyclosporin A binding activity and peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Orthologous to human PPIE (peptidylprolyl isomerase E).

NR:

description
peptidyl-prolyl cis-trans isomerase E

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785640.1 True 1150 mRNA 0.48 10 24491625 24495581

Neighbor

gene id symbol gene type direction distance location
gjb10 LOC103359028,LOC104919306,LOC104946722,LOC101068359 coding downstream 519 24488895 ~ 24491106 (-)
gjb3 LOC104946721 coding downstream 5770 24482913 ~ 24485855 (-)
insm1b insm1,LOC103359023,LOC100710315 coding downstream 40348 24448440 ~ 24451277 (-)
kiz kiz coding downstream 229100 24237019 ~ 24262525 (-)
pax1a pax1,LOC103359018,LOC101466677,LOC102791619,LOC100700371 coding downstream 359844 24127131 ~ 24131781 (-)
pabpc4 pabpc4 coding upstream 2256 24497837 ~ 24505953 (-)
zpcx NA coding upstream 16482 24512063 ~ 24514658 (-)
LOC120549589 hdac1,LOC104919311,LOC102207424,LOC103153388,LOC108237416 coding upstream 24060 24519641 ~ 24526632 (-)
lck lck coding upstream 31706 24527287 ~ 24540160 (-)
fam167b fam167b,LOC105925981 coding upstream 47419 24543000 ~ 24544882 (-)
G205702 zbtb8a non-coding downstream 14732 24475935 ~ 24476893 (-)
G205701 NA non-coding downstream 45229 24443819 ~ 24446396 (-)
LOC120549041 NA non-coding downstream 57792 24429974 ~ 24433833 (-)
G205643 NA non-coding downstream 258516 24232642 ~ 24233109 (-)
LOC120548836 NA non-coding downstream 294241 24186796 ~ 24197384 (-)
LOC120549591 NA non-coding upstream 22431 24518012 ~ 24518764 (-)
G205761 LOC104967137 non-coding upstream 73805 24569386 ~ 24575939 (-)
G205781 NA non-coding upstream 103173 24598754 ~ 24600552 (-)
G205818 NA non-coding upstream 287796 24783377 ~ 24785779 (-)
G205853 NA non-coding upstream 573881 25069462 ~ 25069677 (-)
LOC120548654 LOC106573685,LOC106610772 other downstream 780764 23707989 ~ 23710861 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other downstream 1256827 23024161 ~ 23234798 (-)
LOC120549684 NA other downstream 1543815 22944937 ~ 22947810 (-)
G205380 NA other downstream 1553768 22910107 ~ 22937857 (-)
LOC120549283 khdrbs1 other downstream 1708153 22778005 ~ 22783472 (-)
runx3 runx3 other upstream 120337 24615918 ~ 24664770 (-)
rsrp1 NA other upstream 256572 24752153 ~ 24755421 (-)
fndc5a fndc5,LOC108237574 other upstream 348140 24843721 ~ 24877345 (-)
G205845 bsdc1 other upstream 457625 24953206 ~ 24957041 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other upstream 576774 25072355 ~ 25074124 (-)

Expression


Co-expression Network