LOC120549070 (qpct,LOC100700099)


Basic Information

Item Value
gene id LOC120549070
gene name qpct,LOC100700099
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 23957775 ~ 23965760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785696.1
CATGATCTGTAAGCTTTTACAGAGGAGTGACAGGAATGTGGAGAGGAGCGACAACAACGATGGCTGAGCGAAGCCACAGTACCTCCAAAATGCGTTTATTTTACACTGTGGTCATCTGGGTGACATTCATTCACTGCACCGATGGAATTCCCTGGACACAAGAAAAACTCCATCACCGAGCTCTCACTCTAACACAAGATGAGATCAGTGCCGCCCTGTCTCACACTGACCTGGAGCAGATGTGGCTGAGGGACCTGAGGCCGCTGCTGGTTACCAGGTacccaggctctgcaggcagccAGGCCGTGCAGCAGcATATCAAAACAACCCTTGGTTCCCTCGGAGCAGGCTGGGAGGTGACAGAGGATAAGTTTGCGTCAGAAACACCCTACGGCACTCTGCCCTTCACTAACCTAGTTGCCACCCTCAACTCGTCAGCCAATCGCCGCCTTGTCCTGGCCTGTCACTACGACTCCAAGTACTACCCACCACAATGGCACGGGAGGGAGTTCCAAGGTGCCACTGATTCTGCTGTTCCCTGTGCCATGATGTTGGAGCTGGCACGAGCCCTGGATGAAGAACTGAAGGCTCAGAAGaGCTCCAATCCCGACCTGACTCTGCAGTTGCTCTTCTTTGATGGAGAGGAGGCTCTTTTCCAGTGGACGGGCACAGACTCCCTTTATGGCTCTCGCCACCTTGCCCAGAAGATGGAGAGCACCCCACACCCCGCCGGAGCCACAGACACCAACCAGCTACACGGCATAGATCTGTTTGTGTTGATGGACCTGATCGGGGCTCCTAGCCCACGCTTCGGCAACCAGTTCCCCAGCACAACACCCTGGCTCTCCAGGCTGCAGAGCATTGAAAGGCGTTTACACTCCATGAACCAGCTTGTGGATCATAACAACGTGCAATATTTCTGGCCCAATCAACCCGTTGGCCATGTACAAGATGATCATATACCATTCCTAAACAGAGGTGTGCGCATCCTCCACCtcatcccctcccccttcccgtCCGTGTGGCACACGTTTGATGACAACGAGCAGAACCTGGATCGCTCCACTATTCAGAACCTCAACAAGATCCTGCAGATTTTTGTTCTGGAGTACCTCAACGCCAGACCCGCCATCCCTGCAAACCCACATAATGCCCCATAAAAAAATCCCAGCATACCAATTTGACAACTTTCTTTTAATGTTTCACTGTAGTAAAGATCTTCAGCTGTTATTTTATAGACTGGAGGAATACACTGTATTTAATGCTGTTTAAACACCAACAATATGTATTCATTGACCTTTAAATTGTGAGGTTGAGACTCAACATTTTAcgtaaagaatatgtttagagaTGCTTGATGTCGTCTACatccacatttttttattttgcaatctttttctaaacaaatTTGGGCTTTGGTACGTGAAATGTACTTTGTTCCCAAATGGGTTCATAAGATTCTGAAGCTTCATCTTGCCTTTAGGTCTTAAGTCCCCAGCACACAGGATCCCCTGTGTGTTTTTTACTACACTGCTCTCTTTATATCGGCTTCAAACCCTCCTTTACACTGTGATGAGGCATCAATGCTCATGTCTCGGATATGGTGCCTCAAAGAGAAGGAAAAAGCACAGCGCAgaggttaaagaaaataattgtaaGCAGTTAAAATGCTATGACACCCTTTATTTTTCCACCTTCATTTCCCTGGCAAcattgaaataaatgaatgcattGCAAGTCCAAAGTTGGTGATAATTTCATTATGAATTGCTATGGGGACCGCTGTAGCCTGCTTATAGTCATGTAATAACATCCAGAATCTCTGACCTGTCATGTGtgatacatatatacaatatgGCCACCCACATGATGCTACCAAAAGAGCAGAGTATAAGGCAACACACATGACATGTGTTTTAGCTACAGCCTAGGCTACGTGATATATCCTCTCCTACGAAAATGTGTTCAGAGCAAACCTGTCAGGGGCAGGAAGTGGGTTTATGTGTATTCTTTAGCCTTTCATATCCTGTCATCTTAGATAGTGAAGTGGATAACTTCCTGTGCTGATGTTTTGCCTGCTTTTGTTGAAATCACATCAGTAGCCCGATCTTAATGTAGATCCCAGAATAATATACAGTGCCAAAACTGGACTTCCTATATTTTGAAGctgaaataaatgttgattcaGAATACAAGCGAGACCATGCAGAGTTTGCTTATCTTTATGGGTCTTTGTTTTACTGTTAAATACTGTGAATAAAGAAGTCGCTCTGACGCTCA

Function

symbol description
qpct Predicted to enable glutaminyl-peptide cyclotransferase activity and zinc ion binding activity. Predicted to be involved in peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase. Orthologous to human QPCT (glutaminyl-peptide cyclotransferase).

NR:

description
PREDICTED: glutaminyl-peptide cyclotransferase

GO: NA

KEGG:

id description
K00683 QPCT; glutaminyl-peptide cyclotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785696.1 True 2280 mRNA 0.46 7 23957775 23965760

Neighbor

gene id symbol gene type direction distance location
LOC120549247 cnksr3 coding downstream 2491 23920191 ~ 23955284 (-)
ipcef1 cnksr3 coding downstream 43465 23904803 ~ 23914310 (-)
LOC120549331 tiam2,scaf8 coding downstream 53127 23782980 ~ 23904648 (-)
LOC120549330 cldn20,LOC102228876 coding downstream 189926 23762334 ~ 23767849 (-)
LOC120549835 LOC103353749 coding downstream 214799 23717891 ~ 23742976 (-)
pax1a pax1,LOC103359018,LOC101466677,LOC102791619,LOC100700371 coding upstream 161371 24127131 ~ 24131781 (-)
kiz kiz coding upstream 271259 24237019 ~ 24262525 (-)
insm1b insm1,LOC103359023,LOC100710315 coding upstream 482680 24448440 ~ 24451277 (-)
gjb3 LOC104946721 coding upstream 517153 24482913 ~ 24485855 (-)
gjb10 LOC103359028,LOC104919306,LOC104946722,LOC101068359 coding upstream 523135 24488895 ~ 24491106 (-)
G205493 NA non-coding downstream 383763 23536946 ~ 23574012 (-)
G205492 NA non-coding downstream 397583 23528223 ~ 23560192 (-)
G205494 LOC102076813 non-coding downstream 422212 23529490 ~ 23535563 (-)
G205489 NA non-coding downstream 433461 23518903 ~ 23524314 (-)
LOC120548729 NA non-coding downstream 691121 23255878 ~ 23266654 (-)
LOC120548836 NA non-coding upstream 221036 24186796 ~ 24197384 (-)
G205643 NA non-coding upstream 266882 24232642 ~ 24233109 (-)
LOC120549041 NA non-coding upstream 464214 24429974 ~ 24433833 (-)
G205701 NA non-coding upstream 478059 24443819 ~ 24446396 (-)
G205702 zbtb8a non-coding upstream 510175 24475935 ~ 24476893 (-)
LOC120548654 LOC106573685,LOC106610772 other downstream 246914 23707989 ~ 23710861 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other downstream 722977 23024161 ~ 23234798 (-)
LOC120549684 NA other downstream 1009965 22944937 ~ 22947810 (-)
G205380 NA other downstream 1019918 22910107 ~ 22937857 (-)
LOC120549283 khdrbs1 other downstream 1174303 22778005 ~ 22783472 (-)
runx3 runx3 other upstream 650158 24615918 ~ 24664770 (-)
rsrp1 NA other upstream 786393 24752153 ~ 24755421 (-)
fndc5a fndc5,LOC108237574 other upstream 877961 24843721 ~ 24877345 (-)
G205845 bsdc1 other upstream 987446 24953206 ~ 24957041 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other upstream 1106595 25072355 ~ 25074124 (-)

Expression


Co-expression Network