rsrp1


Basic Information

Item Value
gene id rsrp1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 24752153 ~ 24755421 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785951.1
CTCGCTGGTTCGCTTTCATTAGCTAGAGTGACGACGACAGAGACGGTTCAACATCCACGACGAGTCAACGGTTGCTTCAAACCAACACAATTGAGCATTTTTGAGTTTTATTCGAAAGCTATCGTCGCGTTTACGTTTTCTGAAGGCGACTTTTCTGATATATTGTATATTTGAAAGTCATCAGGAGGACCAAAGGTTTAAAGTCAACGTTACAGTCGACGCTTTTggcaaaaaaaactaacaaaacaaTGGCCAAGGGAGAAGACTCACACTCTGAAATGGCCGACGTTCGTCAGAGAGATGGTATCAATGTAATCTTTGACCAGAACAGCCCTGCCTCGTCTCGCTCCCGCTCACCAGCCAGAAGCAGCGGTGGTGGCAGACGCTCTGTTGGCTCTCGTCGCCACAGGGGACGTGGCACCCACGGGCGACGTTACAGGTCTTCATCGTCGTCTTCGTCCAGCAGCAGGTCCTCCTCTCACACCAGGTCCCGCTCTCACCCTCGTTGCCACAGACCTTCTTCCCGCTGTCGCTGTGACAAACATCGCAGAAATGGCCGTGAGCGCCGCTCCAGGCCTTCCAGCCGCGGGTACAGGAGGTCTGTGAGTCGGTTTTCCCAATCCCCACCCAGAACCCACAAAAGCGGCTCAAGGTCCGGATCTTCAGAGCATTCTGTCAACTTAAATTTGGATGATAAAGAAGAACTCATCAAAACTGCAAAGGCCAATGCTACGACGATTCTAGGAGTGGAGAAGCTGGAACTTCCCGAGAGGATCCTAGAAGTGGAGAAGCTGGaactttctgaatgtgtgaAACCAATCCTGTCAGAGCAGTCGGAGTTCAAATGGGTGTCGTCAGATACATGGGTGAGACAAGACCCTGAAAAGACTCTGTCACAGAGCATTGAGGGGGAGTCTGATATGTCCAGCCCAACGATGtccccaaaaacaaaaatctcTTTCAGCATTCATAATTCTGTGGTCAAACAAACAGTGGCAGCTTCATCTTGTGCTAAGGTAACTTCCAGGATGGACATCTATGAAAGCAGGAAGCCTTATGGTCACTGGGTTCCAGTCCAATCAGGCAAAACCTCCAAAGCACGCAAACACAGACCTGCCACGTCACACTAGAGTGGCAGAGTACATGGACGTTGTAAATATTTTGTACATATATTTTACCATTTCATGGTCAACATTTTCTTTCAGATGTTAAAAGTTAAGTGGAAAGAAGTGAAGATTTCATCCAGGTGGGattatttttccttttgttgTATAGTGTGCTGGTTATGATTGAATAAAGATTTATTTGATA
>XR_005637356.1
CTACTCGCTGGTTCGCTTTCATTAGCTAGAGTGACGACGACAGAGACGGTTCAACATCCACGACGAGTCAACGGTTGCTTCAAACCAACACAATTGAGCATTTTTGAGTTTTATTCGAAAGCTATCGTCGCGTTTACGTTTTCTGAAGGCGACTTTTCTGATATATTGTATATTTGAAAGTCATCAGGAGGACCAAAGGTTTAAAGTCAACGTTACAGTCGACGCTTTTggcaaaaaaaactaacaaaacaaTGGCCAAGGGAGAAGACTCACACTCTGAAATGGCCGACGTTCGTCAGAGAGATGGTATCAATGTAATCTTTGACCAGAACAGCCCTGCCTCGTCTCGCTCCCGCTCACCAGCCAGAAGCAGCGGTGGTGGCAGACGCTCTGTTGGCTCTCGTCGCCACAGGGGACGTGGCACCCACGGGCGACGTTACAGGTCTTCATCGTCGTCTTCGTCCAGCAGCAGGTCCTCCTCTCACACCAGGTCCCGCTCTCACCCTCGTTGCCACAGACCTTCTTCCCGCTGTCGCTGTGACAAACATCGCAGAAATGGCCGTGAGCGCCGCTCCAGGCCTTCCAGCCGCGGGTACAGGAGGTCTGTGAGTCGGTTTTCCCAATCCCCACCCAGAACCCACAAAAGCGGCTCAAGGTCCGGATCTTCAGAGCATTCTGTCAACTTAAATTTGGATGATAAAGAAGAACTCATCAAAACTGCAAAGGCCAATGCTACGACGATTCTAGGAGTGGAGAAGCTGGAACTTCCCGAGAGGATCCTAGAAGTGGAGAAGCTGGaactttctgaatgtgtgaAACCAATCCTGTCAGAGCAGTCGGAGTTCAAATGGGTGTCGTCAGATACATGGGTGAGACAAGACCCTGAAAAGACTCTGTCACAGAATCCTCCACTCGCTGATGGAGCACAGGCGTGTGGACTGCATTATAGTGACTATCCCTGTCGAGAGCTAAAAACAGACGAAGAACTCCTCTCCATATGCCAAAGATAAGTTGGTTCACCAGCTGAGGGCTGGGAAACCTAGGTCACCATCATTCTGCCACTGTAGACAGAAAAGACAAACCTTTActctttttctttgcattttattctgTTTCAAGGTCTGTCCTTGTAGGATTCATTAAATGGTCGAGCCAGGCCTTTGATGGCAGTGGGACGGGGGTGTTAAGTGTTGAAGCtaacacttaaataattaacaATGCAATagaagttttttatttatttatttatttacaatattaaCAATTGGAACTATAATCCATCCATACGAACATAAACTGTCAAGCTCACCCTACCATCAGTTTTACACACGTGTCTAACTAGGTTTGGTTTTCTTGTCTCTTTCAAACAGAGCATTGAGGGGGAGTCTGATATGTCCAGCCCAACGATGtccccaaaaacaaaaatctcTTTCAGCATTCATAATTCTGTGGTCAAACAAACAGTGGCAGCTTCATCTTGTGCTAAGGTAACTTCCAGGATGGACATCTATGAAAGCAG

Function

NR:

description
arginine/serine-rich protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785951.1 False 1311 mRNA 0.47 5 24752153 24755418
XR_005637356.1 True 1519 transcript 0.47 5 24752416 24755421

Neighbor

gene id symbol gene type direction distance location
fam167b fam167b,LOC105925981 coding downstream 207271 24543000 ~ 24544882 (-)
lck lck coding downstream 211993 24527287 ~ 24540160 (-)
LOC120549589 hdac1,LOC104919311,LOC102207424,LOC103153388,LOC108237416 coding downstream 225521 24519641 ~ 24526632 (-)
zpcx NA coding downstream 237495 24512063 ~ 24514658 (-)
pabpc4 pabpc4 coding downstream 246200 24497837 ~ 24505953 (-)
rhd LOC103370138,LOC104956406,LOC108237237 coding upstream 9703 24765124 ~ 24769680 (-)
LOC120549632 LOC103365837,LOC101071868 coding upstream 324612 25080033 ~ 25085851 (-)
LOC120549779 NA coding upstream 527101 25282522 ~ 25284535 (-)
LOC120549778 NA coding upstream 529170 25284591 ~ 25287060 (-)
tpo NA coding upstream 614096 25369517 ~ 25393817 (-)
G205781 NA non-coding downstream 151601 24598754 ~ 24600552 (-)
G205761 LOC104967137 non-coding downstream 176214 24569386 ~ 24575939 (-)
LOC120549591 NA non-coding downstream 233389 24518012 ~ 24518764 (-)
G205702 zbtb8a non-coding downstream 275260 24475935 ~ 24476893 (-)
G205701 NA non-coding downstream 305757 24443819 ~ 24446396 (-)
G205818 NA non-coding upstream 27956 24783377 ~ 24785779 (-)
G205853 NA non-coding upstream 314041 25069462 ~ 25069677 (-)
G205854 NA non-coding upstream 314594 25070015 ~ 25070336 (-)
G205887 NA non-coding upstream 361363 25116784 ~ 25149106 (-)
G205888 NA non-coding upstream 361674 25117095 ~ 25130980 (-)
runx3 runx3 other downstream 87383 24615918 ~ 24664770 (-)
LOC120548654 LOC106573685,LOC106610772 other downstream 1041292 23707989 ~ 23710861 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other downstream 1517355 23024161 ~ 23234798 (-)
LOC120549684 NA other downstream 1804343 22944937 ~ 22947810 (-)
G205380 NA other downstream 1814296 22910107 ~ 22937857 (-)
fndc5a fndc5,LOC108237574 other upstream 88300 24843721 ~ 24877345 (-)
G205845 bsdc1 other upstream 197785 24953206 ~ 24957041 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other upstream 316934 25072355 ~ 25074124 (-)
gnmt gnmt other upstream 512883 25268304 ~ 25344654 (-)
LOC120549744 NA other upstream 577469 25332890 ~ 25367867 (-)

Expression


Co-expression Network