LOC120549245


Basic Information

Item Value
gene id LOC120549245
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 22681322 ~ 22698232 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785981.1
aataggggGGGAGAGGACAAGCGGATGGGTGCTGTGAAATCCGTCAACAGGGGAGCTCTGCATTTGTTAGACGTCTTGGCTGCTTGCCCAACTTGGCTCATTGTAATCGAGGCATGATCGTCGACTCCAGGCAGCCCTCTCTGCTGCCTCGCGCCTGGACCAAGCCCAGCTCTCACCGCTGACATGGAAAGACCTACCTCCAGTGACATGATGCCCAAGAGGGATAATGAAAGGGACCTGGAGCTGGACAAGAAGATCGAGGCTCTCCGCAGGAAGAATGAAGCTCTAATGAAGAGGCACAAGgaggtggaggaggacagGAAAAGGGCAGAAGAGGAAGGAATGGCGCTGCAGAGCCGCAAGGGCAAAGCTGAGGATCTTACCATCACAATCTGCAAGTCTACCAGTGACAGTCGCGTAGTGGTGACGAAGCCATTCAGCAGTGGTTCACCAGCTGGGAAAGGACAGCAGGATTCCGGGCCCGATATGGAGGGAGAAGGCCCTCCACATAGTTCTGGCCAAGGCCACAGGAAGCAGCTAATGGTCACCATGGCTGGCAAAAAGGGTAAGAGGGTGGTGAGTGAGAGGCCAGAGAAGAGGCCAGGCCCTGCGGACATCAAGAGCCCTACAGATGACAGACGGGTGAGGCGTGCGGAGTCAGTGGGGAGGGGCAAGCAGCCACTTCACATGACCAAGAGAGACACAGCACCACAGgatgAGGTTAAACAAGGGCAGAAGCACGCTGAGGAGCATCACAGGCTTTCAGAGCAATGCCAGGAGCCTGAGAGCCTGCAGGGCAGCACAGACCTCAACATCCCCACGTCAaaagaggagcaggaggagtaTGTGCGGTGGAAGAAAGAGCGCGAGCAGATTGACAAGGAAAGAGTGGCACGCCACAAAAACGCCAAGGGTCAGTGGAGGCGGGCATGGGACATGGACAAAACTGAGAACATGTTTTCAGACAAATCCCTCCCTGAAAGAGACTGGGGCCCTTCCAGCAGAGGTGGACGAAATGCTCGTAGAGGACAGTCCAGGGCAGGTCACGAGAAGCGAGCAAAAGACAAGGGAGCCAAAAACGTGCTTGTGATGAGCAGTAAAGCAAAAGGCATCGATCGTCTGACTGGGAGAGCCAGGAGATGGCAGGCAAATGAAGACAGAGAGAACCTACAGTCCTCTGACACGACATTAGAGGAATTCTTGGAGGAACTCGATGCCCTCACAGACACTGAGGTAGAAGATCAGAAAGAAGAGGGCTCAAAAATGAAGCTGTCGCTCAATACATCTGAGAAGGTAAGTACATCCACAGCTACCCCGAGAGCGGACGCCCCCACCCAGGAGAAGGATGAGGCCTCGCCCGCTCGGGTTTCGGAGAAGAAGGTACGCTTCTCAGAAGAACTCAACCTGGAGGCTCACACAAGGTACACCACAGGCTCTCAGGACTCTGCCAGCTCAGAATCAATAAGTGCAAGCTCCTTTAAAGCTTCCTCACGtaataaacaacaacacaaagtgCAGGAGCCACAGCAGCCTCTTGAAAATGCCAAGCAGAACGATGTTAGTCCTCAGGATCAGGGAGGTGGTCCGTCTGCTCCTTCTGTTGCCCAGCAGCAGGCTTCTGAAACGGATTGTACTAAAAAAGACAACACCCTCTCCACAGCTCGGAGCTCCCCCTCTGTTGAAAAAGCCTGTACCTCTCTGCCGGAGAGCTCTGTCAAGCCTGTAGAGCTTGCCAAGTGCAACAtcagcaacacaaacacagAGGAACTAATAGACTCCGGCCTGTCTGTCCTGAGCCTGGAGTCAGGGgaaacacacccaacacactccACCAGCAATGACAAGGTCAGTGTGCGAGACAGGAAGAGGGATGGGAGAATCTATAGATGTGTAAATGGACTGATGGAGGGATGTGCAAATGGATGATGAGTTAAATGGATAAGGAGGAAGAGACAGTCCCTAAATCTGCAGTGCAGCTGTGTGATATCCAATTTCGGTACAGTACATTCCCCAGCTCTGAGGCCTGTTGAAGTGCAGCAGAAATAGTCTCATGAGAGAATGCCTTTATCTCATCTACCACTGAAACAGCTAATATATAACCACCTGCTTGAATCATTGAATTATGGAAAATAAATTAGCTTTAACTAATA
>XM_039785982.1
gttccccctcttcctcttctgctCTGTCGCAGATTTAGCTGTGGCTACATGCAGCGTTTTAGTTATGTCTCTggctctttctctcccctgttGTATCTCCCGTAGGTGGCAGGAACGCTGGGTGGGGAGGAAGCCTTGGTAGCTTTTTCTCTGCAGGGCCCCCACCACCCCTCCCCTTCGCCTGCCTGTCCAGGCATGGGTGCTGTCCGCTGGCAGACCCACAacatctctgtgtgttttgtggtggTTTGTGTATGGGTGCACGTTAGTCTAGCTGCTGCACAATCACAGAACTGGCCGGCCGAACCCAGAGGGGTACCGTCCCCACACAGTGTCCCCCGCTTTGGTTTGTGGAGGCCGGTGTTTACTTCAGTCTCCGCCATTGGCCTCGCTGAGATTCAGATTCGGCTCTCCCTTGTGACTATTCTTGGTGGTATGTCCTcatgctctgttttgtttggataCCCTGACAACTAGAAGCTGTGAGGTGACCACTTTCAAGCCGGCTACTTCTCTGAACCTCCAGTGACATGATGCCCAAGAGGGATAATGAAAGGGACCTGGAGCTGGACAAGAAGATCGAGGCTCTCCGCAGGAAGAATGAAGCTCTAATGAAGAGGCACAAGgaggtggaggaggacagGAAAAGGGCAGAAGAGGAAGGAATGGCGCTGCAGAGCCGCAAGGGCAAAGCTGAGGATCTTACCATCACAATCTGCAAGTCTACCAGTGACAGTCGCGTAGTGGTGACGAAGCCATTCAGCAGTGGTTCACCAGCTGGGAAAGGACAGCAGGATTCCGGGCCCGATATGGAGGGAGAAGGCCCTCCACATAGTTCTGGCCAAGGCCACAGGAAGCAGCTAATGGTCACCATGGCTGGCAAAAAGGGTAAGAGGGTGGTGAGTGAGAGGCCAGAGAAGAGGCCAGGCCCTGCGGACATCAAGAGCCCTACAGATGACAGACGGGTGAGGCGTGCGGAGTCAGTGGGGAGGGGCAAGCAGCCACTTCACATGACCAAGAGAGACACAGCACCACAGgatgAGGTTAAACAAGGGCAGAAGCACGCTGAGGAGCATCACAGGCTTTCAGAGCAATGCCAGGAGCCTGAGAGCCTGCAGGGCAGCACAGACCTCAACATCCCCACGTCAaaagaggagcaggaggagtaTGTGCGGTGGAAGAAAGAGCGCGAGCAGATTGACAAGGAAAGAGTGGCACGCCACAAAAACGCCAAGGGTCAGTGGAGGCGGGCATGGGACATGGACAAAACTGAGAACATGTTTTCAGACAAATCCCTCCCTGAAAGAGACTGGGGCCCTTCCAGCAGAGGTGGACGAAATGCTCGTAGAGGACAGTCCAGGGCAGGTCACGAGAAGCGAGCAAAAGACAAGGGAGCCAAAAACGTGCTTGTGATGAGCAGTAAAGCAAAAGGCATCGATCGTCTGACTGGGAGAGCCAGGAGATGGCAGGCAAATGAAGACAGAGAGAACCTACAGTCCTCTGACACGACATTAGAGGAATTCTTGGAGGAACTCGATGCCCTCACAGACACTGAGGTAGAAGATCAGAAAGAAGAGGGCTCAAAAATGAAGCTGTCGCTCAATACATCTGAGAAGGTAAGTACATCCACAGCTACCCCGAGAGCGGACGCCCCCACCCAGGAGAAGGATGAGGCCTCGCCCGCTCGGGTTTCGGAGAAGAAGGTACGCTTCTCAGAAGAACTCAACCTGGAGGCTCACACAAGGTACACCACAGGCTCTCAGGACTCTGCCAGCTCAGAATCAATAAGTGCAAGCTCCTTTAAAGCTTCCTCACGtaataaacaacaacacaaagtgCAGGAGCCACAGCAGCCTCTTGAAAATGCCAAGCAGAACGATGTTAGTCCTCAGGATCAGGGAGGTGGTCCGTCTGCTCCTTCTGTTGCCCAGCAGCAGGCTTCTGAAACGGATTGTACTAAAAAAGACAACACCCTCTCCACAGCTCGGAGCTCCCCCTCTGTTGAAAAAGCCTGTACCTCTCTGCCGGAGAGCTCTGTCAAGCCTGTAGAGCTTGCCAAGTGCAACAtcagcaacacaaacacagAGGAACTAATAGACTCCGGCCTGTCTGTCCTGAGCCTGGAGTCAGGGgaaacacacccaacacactccACCAGCAATGACAAGGTCAGTGTGCGAGACAGGAAGAGGGATGGGAGAATCTATAGATGTGTAAATGGACTGATGGAGGGATGTGCAAATGGATGATGAGTTAAATGGATAAGGAGGAAGAGACAGTCCCTAAATCTGCAGTGCAGCTGTGTGATATCCAATTTCGGTACAGTACATTCCCCAGCTCTGAGGCCTGTTGAAGTGCAGCAGAAATAGTCTCATGAGAGAATGCCTTTATCTCATCTACCACTGAAACAGCTAATATATAACCACCTGCTTGAATCATTGAATTATGGAAAATAAATTAGCTTTAACTAATA
>XM_039785983.1
ATGGAAAGACCTACCTCCAGTGACATGATGCCCAAGAGGGATAATGAAAGGGACCTGGAGCTGGACAAGAAGATCGAGGCTCTCCGCAGGAAGAATGAAGCTCTAATGAAGAGGCACAAGgaggtggaggaggacagGAAAAGGGCAGAAGAGGAAGGAATGGCGCTGCAGAGCCGCAAGGGCAAAGCTGAGGATCTTACCATCACAATCTGCAAGTCTACCAGTGACAGTCGCGTAGTGGTGACGAAGCCATTCAGCAGTGGTTCACCAGCTGGGAAAGGACAGCAGGATTCCGGGCCCGATATGGAGGGAGAAGGCCCTCCACATAGTTCTGGCCAAGGCCACAGGAAGCAGCTAATGGTCACCATGGCTGGCAAAAAGGGTAAGAGGGTGGTGAGTGAGAGGCCAGAGAAGAGGCCAGGCCCTGCGGACATCAAGAGCCCTACAGATGACAGACGGGTGAGGCGTGCGGAGTCAGTGGGGAGGGGCAAGCAGCCACTTCACATGACCAAGAGAGACACAGCACCACAGgatgAGGTTAAACAAGGGCAGAAGCACGCTGAGGAGCATCACAGGCTTTCAGAGCAATGCCAGGAGCCTGAGAGCCTGCAGGGCAGCACAGACCTCAACATCCCCACGTCAaaagaggagcaggaggagtaTGTGCGGTGGAAGAAAGAGCGCGAGCAGATTGACAAGGAAAGAGTGGCACGCCACAAAAACGCCAAGGGTCAGTGGAGGCGGGCATGGGACATGGACAAAACTGAGAACATGTTTTCAGACAAATCCCTCCCTGAAAGAGACTGGGGCCCTTCCAGCAGAGGTGGACGAAATGCTCGTAGAGGACAGTCCAGGGCAGGTCACGAGAAGCGAGCAAAAGACAAGGGAGCCAAAAACGTGCTTGTGATGAGCAGTAAAGCAAAAGGCATCGATCGTCTGACTGGGAGAGCCAGGAGATGGCAGGCAAATGAAGACAGAGAGAACCTACAGTCCTCTGACACGACATTAGAGGAATTCTTGGAGGAACTCGATGCCCTCACAGACACTGAGGTAGAAGATCAGAAAGAAGAGGGCTCAAAAATGAAGCTGTCGCTCAATACATCTGAGAAGGTAAGTACATCCACAGCTACCCCGAGAGCGGACGCCCCCACCCAGGAGAAGGATGAGGCCTCGCCCGCTCGGGTTTCGGAGAAGAAGGTACGCTTCTCAGAAGAACTCAACCTGGAGGCTCACACAAGGTACACCACAGGCTCTCAGGACTCTGCCAGCTCAGAATCAATAAGTGCAAGCTCCTTTAAAGCTTCCTCACGtaataaacaacaacacaaagtgCAGGAGCCACAGCAGCCTCTTGAAAATGCCAAGCAGAACGATGTTAGTCCTCAGGATCAGGGAGGTGGTCCGTCTGCTCCTTCTGTTGCCCAGCAGCAGGCTTCTGAAACGGATTGTACTAAAAAAGACAACACCCTCTCCACAGCTCGGAGCTCCCCCTCTGTTGAAAAAGCCTGTACCTCTCTGCCGGAGAGCTCTGTCAAGCCTGTAGAGCTTGCCAAGTGCAACAtcagcaacacaaacacagAGGAACTAATAGACTCCGGCCTGTCTGTCCTGAGCCTGGAGTCAGGGgaaacacacccaacacactccACCAGCAATGACAAGGCAAGAGAGCATGGGAAGATTGTTTGACGTTTTCAGGATGTAAATACTGAAACCAAATCACAGCGACACAGAGCCTTGCCTCTTTGTATTTGCATTTTGCTTCAGGTAGCTCATTTGAGATACCCTGTTTATGGCTTATACACAAAACAATGGTTTACTTTTTGCTGTGGCGTGTCCCACCTGTGGAAGTTTTCAAATTGTCAACAAATTTGATGAAGGAATGGTGAACGTCTTTCCTgctcaaatattttttacatcCAAGCACTTTATGAGTATAAAAGTATGCATACTGACACATTATTCAGCATGTTAGTACGCTGCTTGAGTGCAATATCATTGAATGTTTACATTTGTATGAAAATTTCAAGGTACATATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785981.1 False 2150 mRNA 0.52 13 22681731 22698232
XM_039785982.1 True 2473 mRNA 0.53 13 22681731 22697938
XM_039785983.1 False 2041 mRNA 0.51 14 22681322 22698049

Neighbor

gene id symbol gene type direction distance location
plcb2 plcb2 coding downstream 14608 22648288 ~ 22666714 (-)
LOC120548817 ankrd63 coding downstream 50967 22628336 ~ 22630355 (-)
zfyve19 zfyve19 coding downstream 81067 22589199 ~ 22600255 (-)
spint1a NA coding downstream 96392 22576769 ~ 22584930 (-)
LOC120549361 plekhg3,LOC103357032 coding downstream 106832 22538189 ~ 22574490 (-)
mthfd1b mthfd1 coding upstream 24548 22722780 ~ 22735027 (-)
LOC120549277 klhl28,LOC102787432 coding upstream 39605 22737837 ~ 22747538 (-)
ccdc28b ccdc28b,LOC103357048,LOC102303603,LOC100707625,LOC104924809 coding upstream 66613 22764845 ~ 22772062 (-)
tmem39b tmem39b coding upstream 74656 22772888 ~ 22776944 (-)
zbtb8os zbtb8os coding upstream 87253 22785485 ~ 22788583 (-)
G205242 NA non-coding downstream 45860 22635201 ~ 22635462 (-)
G205219 NA non-coding downstream 154236 22524966 ~ 22527086 (-)
G205212 cep170b non-coding downstream 169917 22508455 ~ 22511405 (-)
G205205 NA non-coding downstream 187687 22493283 ~ 22493635 (-)
G205189 NA non-coding downstream 244745 22427890 ~ 22436577 (-)
G205297 NA non-coding upstream 7485 22705717 ~ 22719412 (-)
LOC120548708 NA non-coding upstream 190412 22888644 ~ 22895642 (-)
LOC120549686 NA non-coding upstream 211740 22909972 ~ 22920458 (-)
LOC120549687 NA non-coding upstream 251995 22950227 ~ 22951060 (-)
LOC120548728 NA non-coding upstream 437353 23135585 ~ 23150231 (-)
zbtb42 zbtb42,LOC102793331 other downstream 233379 22440729 ~ 22447943 (-)
chrm5a LOC103374637,LOC108232519,LOC106520150 other downstream 750056 21920885 ~ 21931266 (-)
LOC120549141 max,LOC103363129,LOC100701192,LOC101485218,LOC108232653,LOC102777802 other downstream 923727 21752386 ~ 21757595 (-)
LOC120549379 LOC100705232,LOC102305635,LOC102778868,LOC104921326,LOC101482755 other downstream 977552 21656220 ~ 21703770 (-)
LOC120548683 NA other downstream 1688634 20990937 ~ 20992688 (-)
LOC120549283 khdrbs1 other upstream 79773 22778005 ~ 22783472 (-)
G205380 NA other upstream 211875 22910107 ~ 22937857 (-)
LOC120549684 NA other upstream 246705 22944937 ~ 22947810 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other upstream 325929 23024161 ~ 23234798 (-)
LOC120548654 LOC106573685,LOC106610772 other upstream 1009757 23707989 ~ 23710861 (-)

Expression


Co-expression Network