Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120549249 |
| gene name | LOC103353941,LOC101078900 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053131.1 |
| NCBI id | CM020928.1 |
| chromosome length | 36057207 |
| location | 33508608 ~ 33524752 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| PREDICTED: spectrin beta chain, non-erythrocytic 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039785993.1 | True | 568 | mRNA | 0.54 | 4 | 33508608 | 33524752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sptbn5 | NA | coding | downstream | 47761 | 33323607 ~ 33460847 (-) |
| foxg1a | foxg1,LOC106934576,LOC103147766,LOC102223528 | coding | downstream | 203169 | 33303751 ~ 33305439 (-) |
| LOC120548945 | NA | coding | downstream | 544559 | 32961278 ~ 32964049 (-) |
| LOC120549825 | afg3l2 | coding | downstream | 817695 | 32687730 ~ 32690913 (-) |
| LOC120549706 | NA | coding | downstream | 2531650 | 30971115 ~ 30976958 (-) |
| coch | coch,LOC102779905 | coding | upstream | 69316 | 33594068 ~ 33623644 (-) |
| LOC120549318 | LOC104924818,LOC103353924,LOC102795936,LOC101485054 | coding | upstream | 716074 | 34240826 ~ 34256495 (-) |
| LOC120549317 | LOC103353926 | coding | upstream | 737455 | 34262207 ~ 34273793 (-) |
| LOC120549319 | NA | coding | upstream | 845098 | 34369850 ~ 34370808 (-) |
| LOC120549830 | NA | coding | upstream | 867113 | 34391865 ~ 34392773 (-) |
| G207794 | NA | non-coding | downstream | 20188 | 33478983 ~ 33488420 (-) |
| G207776 | NA | non-coding | downstream | 61649 | 33366397 ~ 33446959 (-) |
| G207788 | NA | non-coding | downstream | 72965 | 33435219 ~ 33435643 (-) |
| G207781 | NA | non-coding | downstream | 132414 | 33373384 ~ 33376194 (-) |
| G207778 | NA | non-coding | downstream | 132808 | 33367058 ~ 33375800 (-) |
| G207809 | NA | non-coding | upstream | 25011 | 33549763 ~ 33571433 (-) |
| G207801 | NA | non-coding | upstream | 121949 | 33646701 ~ 33683064 (-) |
| G207817 | NA | non-coding | upstream | 160820 | 33685572 ~ 33686916 (-) |
| G207824 | NA | non-coding | upstream | 180228 | 33704980 ~ 33705588 (-) |
| G207826 | NA | non-coding | upstream | 182417 | 33707169 ~ 33709487 (-) |
| G207802 | NA | other | downstream | 10076 | 33491573 ~ 33498532 (-) |
| G207742 | NA | other | downstream | 359315 | 33094185 ~ 33149293 (-) |
| prkd1 | prkd1,LOC107391660 | other | downstream | 430289 | 32994358 ~ 33078319 (-) |
| G207741 | NA | other | downstream | 437881 | 33070261 ~ 33070727 (-) |
| LOC120548944 | npas3 | other | downstream | 576598 | 32859559 ~ 32932010 (-) |
| ehd4 | LOC107391916,LOC105938093,LOC106527300,LOC102223325,LOC103156172,LOC103382107,LOC101073507 | other | upstream | 7735 | 33532487 ~ 33647324 (-) |
| G207808 | NA | other | upstream | 8725 | 33533477 ~ 33611751 (-) |
| scfd1 | scfd1,LOC105419774,LOC105419155,LOC107719485 | other | upstream | 108227 | 33632979 ~ 33702742 (-) |
| g2e3 | g2e3,LOC102781532 | other | upstream | 185111 | 33709863 ~ 33731941 (-) |
| strn3 | strn3 | other | upstream | 242184 | 33766936 ~ 33884726 (-) |
