LOC120549632 (LOC103365837,LOC101071868)


Basic Information

Item Value
gene id LOC120549632
gene name LOC103365837,LOC101071868
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 25080033 ~ 25085851 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039786670.1
GTTTGGCAGGATTTCTGAGGGAAGGCGAgagagcagagacagacagagaggaaaaagcATCAGAATAGTTTAGTTTTTACTTCACTGTATTTAACTTGTCCTGTTAATCTTCTCCTGCTGGTGTCGACATATTGGGTTTTGGTATTTGAGTCCGGTTTCAGCACTAGGGTGTACTTGTTTCTATCACCCAGGCCAGCGTAGCAGCAGTGATGAACTGGTCGGGACTGGAGAGTCTGTTAAGTGGAGTCAATAAATACTCCACTGCATTCGGGAGGATCTGGCTGTCCATGGTGTTTGTCTTCCGTGTGCTGGTGTTTGTGGTGGCAGCGCAGAAGGTTTGGGGCGACGAGAGCAAAGACTTTGAGTGTAATACTCGACAGCCTGGCTGTACCAACATCTGCTATGACCACATCTTCCCCATCTCCCATATCCGTCTGTGGGCACTGCAGCTGATTTTTGTCACCTGCCCGTCTCTGATGGTGATGGCTCATGTTAAATACCGCGAAGGAAAGGACATGAAACATGTGCAGCTGCACCCCGGCTCTCACCTGTACGCCAACCCTGGCAAGAAAAGAGGGGGGCTGTGGTGGACCTATCTGCTGAGTTTGGTCTTCAAAGCTGGATTTGACACATCATTTCTTTACATTCTGTATCGGATATACCACGGATATGACTTGCCCAGgTTATCCAAGTGTTCACTGGACCCATGCCCTAACACCGTGGATTGCTTCATTAGTCGTCCAACAGAGAAAAAGATCTTCATGTTGTTCATGGTTGTATCCAGCGCGCTGTGCATCTTCATGTGCATCTGCGAGATGGTTTACCTCATCGGCACGCGCATTGCCAAATTGTTAAGGATCCGCCGAGACAACGAGAGGTTCCTATTTGCTGAGCAGCATGAGCTCACCGACATGGCCCCACGTAGGTCTCAGTATCGTAGGACTGATCCCACATTGACAGACAGCCAGCTCAGTTTAAACAAGAAGGAGAAGATCAGAGAAGGTGGTAAAAGTACGGCCCTGTAAGGAGGTTTGTCTCTAACGGGTGGCTACACAACAGGACCAAAAGTTACCTGATGAAGTTGTTGAACTAAAAGACTAATAAAAGGACCGATCCTGTGTATCGTGACCCAGCTGAACATGAGACATTCATCACTCTCCTTTGAAAGGATCTCCAACCCTGGCTGGTTGTATGTTGCAGGACACTTTAAAGAAGAGGAGTACTAtagtatttcaatcaggagtgaCAAGTGAATGAAGTAAAGATGAATGTTTATTATAACAGGTGATATGTGATATTTAAGTTTTGCTAGAAAGTCTTTGGTGCTTGGACTCTACAGGGAGATTTGTAACTGAGGGGCATACCCTGAGCAGCAAGCCAGATAGCCAGCCAGATTTTGATCACAAATCAACGTCAATATGTCATTTTAATTACATGTAACACCTTAGAGTAAGTATtgtaaataacaacaacactgttAATAGCTTTACTAATTGTGCAACTTAGAAAAAGATTGCATCCGGGTCTCTTTGCGTTCATATTTCTTCCACTAAAGGGACCAACATGCTGCTGGGAATTTAATGCGCTGATGCCCCACACGAAGTGTTGGGTTGTCAATGTGAGTTGTTTAACTCATTGCAAAATTGAACCATTGCACTAAATCTAGATTTGGATATTTTTTCAGAGGATGTTAGCTGGCAGagtgatgaaaaaaacactttttctgggatttggggtgtttgggtgttattttgtgtctctggtgcttccacacacatacaaactttgga

Function

NR:

description
PREDICTED: gap junction beta-4 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039786670.1 True 1790 mRNA 0.45 4 25080033 25085851

Neighbor

gene id symbol gene type direction distance location
rhd LOC103370138,LOC104956406,LOC108237237 coding downstream 310353 24765124 ~ 24769680 (-)
fam167b fam167b,LOC105925981 coding downstream 535151 24543000 ~ 24544882 (-)
lck lck coding downstream 539873 24527287 ~ 24540160 (-)
LOC120549589 hdac1,LOC104919311,LOC102207424,LOC103153388,LOC108237416 coding downstream 553401 24519641 ~ 24526632 (-)
zpcx NA coding downstream 565375 24512063 ~ 24514658 (-)
LOC120549779 NA coding upstream 196671 25282522 ~ 25284535 (-)
LOC120549778 NA coding upstream 198740 25284591 ~ 25287060 (-)
tpo NA coding upstream 283666 25369517 ~ 25393817 (-)
sntg2 sntg2 coding upstream 316661 25402512 ~ 25482994 (-)
kiaa1109 kiaa1109 coding upstream 409374 25495225 ~ 25587817 (-)
G205854 NA non-coding downstream 9697 25070015 ~ 25070336 (-)
G205853 NA non-coding downstream 10356 25069462 ~ 25069677 (-)
G205818 NA non-coding downstream 294254 24783377 ~ 24785779 (-)
G205781 NA non-coding downstream 479481 24598754 ~ 24600552 (-)
G205761 LOC104967137 non-coding downstream 504094 24569386 ~ 24575939 (-)
G205887 NA non-coding upstream 30933 25116784 ~ 25149106 (-)
G205888 NA non-coding upstream 31244 25117095 ~ 25130980 (-)
G205937 NA non-coding upstream 148445 25234296 ~ 25235721 (-)
G205941 NA non-coding upstream 180980 25266831 ~ 25267035 (-)
G205978 NA non-coding upstream 303300 25389151 ~ 25389389 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other downstream 5909 25072355 ~ 25074124 (-)
G205845 bsdc1 other downstream 122992 24953206 ~ 24957041 (-)
fndc5a fndc5,LOC108237574 other downstream 202688 24843721 ~ 24877345 (-)
rsrp1 NA other downstream 324612 24752153 ~ 24755421 (-)
runx3 runx3 other downstream 415263 24615918 ~ 24664770 (-)
gnmt gnmt other upstream 182453 25268304 ~ 25344654 (-)
LOC120549744 NA other upstream 247039 25332890 ~ 25367867 (-)
G206198 fbxo33,LOC102800092 other upstream 1735837 26821688 ~ 26825064 (-)
LOC120549840 NA other upstream 2926188 28012039 ~ 28034752 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other upstream 2960354 28046205 ~ 28204448 (-)

Expression


Co-expression Network