LOC120549682


Basic Information

Item Value
gene id LOC120549682
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 22924877 ~ 22935375 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039786763.1
GCTGTTTATAAAACTCAGCCCAGTTCGTGACTCGTCAAAACAGAGAACGACATGGACCCTTGGACAGTTGCCACCGTGGTAGGAGGTGCAGTAGGTGCTGTGGTCGCAGCTCCTGTTGTTCTGGGAGCCGTAGGTTTCACCTCAGCTGGAATAGCAGCAGGCTCCTATGCTGCTGGCATGATGTCGGCTGCTGCAGTCGCTAACGGAGGAGCAGTGGCAGCAGGAGGGATAGTGGCTGCTTTGCAGTCAGCAGTAGGTGCTGCGGTCGCAACTCCTGTTGTTCTGGGAGTAGTAGGAGCCATAGGTTTCACCTCAGCTGGAATAGCAGCAGGCTCCTATGCTGCCGGCATGATGTCGGCTGCTGCAGTCGCTAACGGAGGAGGAGCGGCAGAGAAGTACAGTGGCTGCTTTGCAGGCAGAGCAGCTGGTCTGTCAGGAGCTGCCACTGCAGCTATGACTGGAGCTGGAGCAGCAGCTGGCGCAGCAGTGGGATGGCTGGCTGCCATAATTATCTAAAAAATCAAGACTGAACAAGATGAAGATTTTTACTTTTGCCAAGTGAAGGAGGCAACTGCAAATTAGGCTATATTAGTTCACCTAACAGAACTTTTGCGTTGTGCAATAAATCGGTTTTGTTTGTAATAAATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039786763.1 True 649 mRNA 0.52 5 22924877 22935375

Neighbor

gene id symbol gene type direction distance location
LOC120549695 LOC104963679,LOC104924644,LOC108232949,LOC106952285 coding downstream 62243 22848784 ~ 22862634 (-)
si:ch211-67f13.7 LOC102776559 coding downstream 78484 22842589 ~ 22846393 (-)
LOC120548820 LOC102776559 coding downstream 89377 22832802 ~ 22835500 (-)
LOC120548822 NA coding downstream 124884 22794601 ~ 22799993 (-)
zbtb8os zbtb8os coding downstream 136294 22785485 ~ 22788583 (-)
LOC120549679 zdhhc14,LOC104924637 coding upstream 21123 22956498 ~ 23019246 (-)
LOC120549624 kbtbd11 coding upstream 336710 23272085 ~ 23277308 (-)
arhgef10 arhgef10 coding upstream 344091 23279466 ~ 23337117 (-)
trnai-aau_28 NA coding upstream 363412 23298787 ~ 23298860 (-)
trnai-aau_29 NA coding upstream 393794 23329169 ~ 23329242 (-)
LOC120549686 NA non-coding downstream 4419 22909972 ~ 22920458 (-)
LOC120548708 NA non-coding downstream 29235 22888644 ~ 22895642 (-)
G205297 NA non-coding downstream 205465 22705717 ~ 22719412 (-)
G205242 NA non-coding downstream 289415 22635201 ~ 22635462 (-)
G205219 NA non-coding downstream 397791 22524966 ~ 22527086 (-)
LOC120549687 NA non-coding upstream 14852 22950227 ~ 22951060 (-)
LOC120548728 NA non-coding upstream 200210 23135585 ~ 23150231 (-)
LOC120548729 NA non-coding upstream 320503 23255878 ~ 23266654 (-)
G205489 NA non-coding upstream 583528 23518903 ~ 23524314 (-)
G205492 NA non-coding upstream 592848 23528223 ~ 23560192 (-)
LOC120549283 khdrbs1 other downstream 141405 22778005 ~ 22783472 (-)
zbtb42 zbtb42,LOC102793331 other downstream 476934 22440729 ~ 22447943 (-)
chrm5a LOC103374637,LOC108232519,LOC106520150 other downstream 993611 21920885 ~ 21931266 (-)
LOC120549141 max,LOC103363129,LOC100701192,LOC101485218,LOC108232653,LOC102777802 other downstream 1167282 21752386 ~ 21757595 (-)
LOC120549379 LOC100705232,LOC102305635,LOC102778868,LOC104921326,LOC101482755 other downstream 1221107 21656220 ~ 21703770 (-)
LOC120549684 NA other upstream 9562 22944937 ~ 22947810 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other upstream 88786 23024161 ~ 23234798 (-)
LOC120548654 LOC106573685,LOC106610772 other upstream 772614 23707989 ~ 23710861 (-)
runx3 runx3 other upstream 1680543 24615918 ~ 24664770 (-)
rsrp1 NA other upstream 1816778 24752153 ~ 24755421 (-)

Expression


Co-expression Network