hhipl1 (hhipl1,LOC104946013,LOC102307847,LOC101469970)



Basic Information


Item Value
gene id hhipl1
gene name hhipl1,LOC104946013,LOC102307847,LOC101469970
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 30098783 ~ 30107706 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039786801.1
CGGGACAGCAGCCTGACGACAGACAGCCCCGGTTGACACAGCGGTCGGGTTCACCACGTCAGAGGGCAACACAACGCGAATGATCGGAGTCAGAGTCAAAGTGCACACAGGAAGTCGCTTCTGGTACAACTTTCTCTTCGATGATCTCCAACGCACGCCATAATGCGGCGGTGTTATGGCAAAGTCCCGGCTCGGCTGTGGCTCTCGCCGACTGGCATTTTGTATGTTTTGGCGTTGTGTGTCGCACCTGTAGCGCTACACCCGCAGTGTTTGGACTTCAAGCCGCCCTTCCGACCGCAGAGGGAGATAGAGTTCTGCGTAATGTACAAGGAGTTTGGCTGCTGTGATTATCAGAAAGACCAGGACCTGATGACAAAGTACTACCAGATTATGGATAACTTTGATTATTATGGATATGCCAACTGTGCTGGCTTCGTCCTGGAGCTGCTCTGCCAGGAATGCTCTCCATATGCAGCTCACCTCTTTGATGCCGAGGACCCGAGCACCCCAATCAGGACCATCCCCGGCCTCTGTCCTGACTACTGCCCCCAGTTTTGGAAGAAGTGCAGCTCCACCATCCCTTTCCTGTCCGACGACCCACACATAGCCAAAGTCAAAGAAGACCAGACACGTCTCTGCCAGTACCTGGAACTAGACGACGTTGACTACTGCTACCCACGCCTTCTCAGCAACCAGAAGCTCACAAGCAATCTGGGCAAGGTTCAGTCGGACTCGGACGGCTGTCTGCAGCTGTGCCTGGAAGAAGTTGCAAATGGGCTGCGGAACCCGCTAGCCATGGTGCACGCCAACGATGGGACACATCGGTTCTTTGTGGCAGAACAGGTGGGCTTGGTTTGGACGTATCTTCCTGACCGGTCCAAACTGGAGAGACCCTTTTTGAACATTACCAAGGCGGTGTTAACGTCATCATGGGAAGGTGATGAGAGAGGCTTTCTGGGACTCACCTTTCACCCCAAGTACAAGTACAATGGGAAGCTGTACGTGTATTACTCAGTGGAGGTGGGTTTTGATGAGAGGATCAGGATCAGTGAGTTCCATGTGTCAGCCAATGACATGAATGTGGTGGATCATGCCTCTGAGCGGGTTATTCTGGAGATCGATGAACCAGCATCCAACCACAATGGAGGGCAActtctttttgcagatgatggcTACTTGTACATTTTCACAGGGGACGGTGGAATGGCAGGAGACCCATTCGGGAAATATGGGAATGCCCAGAACAAGTCAGCTCTGTTGGGTAAAGTTCTCCGCATTGATGTGAATGACAATGAGAGAGGCCCGTTGTACAGAATTCCTCCAGATAACCCCTTCAAGCACGAGCGGGGGGCACGACCGGAGGTATATGCTTACGGTGTCCGCAATATGTGGAGGTGTTCTGTGGACCGGGGCGACCCTCGGACCAAAGAGGGCAAAGGACGTATCTTCTGCGGGGATGTGGGCCAGAACAAGTTTGAAGAGATCGACATCATCGAGAAAGGTCGAAACTACGGCTGGAGAGCCAAAGAGGGCTTCTCCTGCTATGATAAGAAGCTGTGTGCCAACAGCTCCCTAGATGATGTCCTCCCTATTTACGCGTACCCTCATAAGATGGGCAAGTCAGTGACTGGTGGCTATGTTTACCGAGGCTGTGAATACCCCAACATGAACGGCATGTACATATTTGGAGACTTCATGAGTGGGCGTTTGATGAGTCTGCGGGAGGACAGAAACACAGGGAACTGGAACTACAATGAGATCTGTATGGGGATGGGCCTGACCTGTGCCTTCCCTGGACTCATCAACAACTACCACCAGTACATCATCTCCTTTGCAGAGGATGAAGCTGGCGAGCTGTACTTCATGTCGACTGGAATACCGAGCGCTACGTCACCTTCAGGAGTCGTTTATAAAGTGGTGGACCCTTCAAGaCGTGCTCCACCGAGACAATGCCACTATGaccctcttcctgtcagagtgaAAAGTAACCTCATCAAGTTTGTTCCCCAGGAAACATTAATCGGTGTTGAGCCAGCAAACAAAATCCAGCCTGAGCCACAACCCACAGAGTCCTACGACTGGCTCCAGGAGCTCATTGACCGTCTAGGAGGACCAGACCCGACCACTGCTTTGCCAACCACAACCACTACCAAATCATCCAGACATTCGAGGCGGAAAGGCAGACGCAGGAAGGGCAAATCCAGAACGCAGAGTACACCTGAGCTCCAGAACGGAGTGGTGAGGCTGGTTGGGGATGAACAAGGCCGCAGCGACCGCGGACGGGTGGAGATCTACGTTAACGGGGAGTGGGGCACCGTTTGTGACGACCTTTGGACCACCAAGAATGCTGCAGTGGTTTGCCAGCAGCTGGGCTTCAGCTACGCTATTAAGGCAGCCAGGAACTCGGAGTTTGGGGAGGGGAAGGATCTGCAGATTCTTCTGGATGATGTTCAGTGTGAAGGGACCGAGTCCAGCCTGCTGGACTGCACACACGCCGGCGTGGGGACACATAACTGTGCCCATTATGAAGACGCCGGGGTGATCTGTGGCAACTCGGACTCCGTTGTAGAAGTCTAAATGTTTGACTATTATGAAATCAAAGCTAATTATCATTAACTAAATCTGTTCCACCCTAAATTTAACAGCCAATCTACTCATGAAGGAGCACACCAAACATAGAGCACATGACTTTATGTCTTGATATTTTCAGCAGATACAATGGATGGCAGAAATATGCTCTaaaattgttgtattttgttgtcagtccatcacaataaaaaggcaatCTTGTaggacagtggttcccaaagtgaGGTCCGGGGACCCCCAGGGGTCCTTGAGGGGGTTCCAGCATGTCCGGAGCAAAAGGGggaataatttattttcactaaaaTTGCATCCTTAAGCGTGCATTCACACTAACTGCATCGTTCCTCTGATGGTGCAGTGAAAACGCAgatctttccattcatttagaATGGGGGTAAGTGGTTATGCTGCGCGGTGGGGTGCGC

Function


symbol description
hhipl1 Predicted to enable catalytic activity and scavenger receptor activity. Located in cytoplasm. Orthologous to human HHIPL1 (HHIP like 1).

NR:

description
HHIP-like protein 1

GO:

id name namespace
GO:0006898 receptor-mediated endocytosis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005975 carbohydrate metabolic process biological_process
GO:0016020 membrane cellular_component
GO:0048038 quinone binding molecular_function
GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor molecular_function
GO:0005044 scavenger receptor activity molecular_function

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039786801.1 True 3014 mRNA 0.51 9 30098783 30107706

Neighbor


gene id symbol gene type direction distance location
dglucy clg19h14orf159,LOC102307814,LOC101472904,LOC102192187,LOC103371603 coding downstream 68194 30003949 ~ 30030589 (-)
dnal1 dnal1 coding downstream 280179 29812573 ~ 29818604 (-)
tedc1 NA coding downstream 286816 29804770 ~ 29811967 (-)
LOC120549562 LOC102082553,LOC103383726,LOC106521240 coding downstream 342781 29741772 ~ 29756002 (-)
adi1 adi1 coding downstream 369287 29720691 ~ 29729496 (-)
zgc:123321 yipf7,LOC105917875 coding upstream 274033 30381739 ~ 30390072 (-)
dapp1 dapp1 coding upstream 289039 30396745 ~ 30421488 (-)
atp10d atp10d coding upstream 315233 30422939 ~ 30481764 (-)
gabrb1 gabrb1,LOC103364303,LOC108247011,LOC106600539,LOC106926079 coding upstream 392536 30500242 ~ 30571752 (-)
LOC120549895 gnpda2,LOC104934428 coding upstream 582272 30689978 ~ 30697246 (-)
G206958 NA non-coding downstream 48 30097563 ~ 30098735 (-)
G206925 NA non-coding downstream 135467 29962998 ~ 29963316 (-)
G206922 NA non-coding downstream 146243 29942524 ~ 29952540 (-)
G206918 ccdc88c non-coding downstream 170479 29928026 ~ 29928304 (-)
G206896 NA non-coding downstream 185880 29845570 ~ 29912903 (-)
G206966 NA non-coding upstream 85467 30193173 ~ 30193710 (-)
LOC120548652 NA non-coding upstream 224823 30332529 ~ 30345406 (-)
LOC120549085 NA non-coding upstream 377079 30484785 ~ 30487505 (-)
LOC120549477 NA non-coding upstream 389064 30496770 ~ 30498292 (-)
G207104 daam1,LOC103373422 non-coding upstream 724837 30832543 ~ 30833569 (-)
G206919 ccdc88c other downstream 164217 29934262 ~ 29934566 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other downstream 1894335 28046205 ~ 28204448 (-)
LOC120549840 NA other downstream 2064031 28012039 ~ 28034752 (-)
G206198 fbxo33,LOC102800092 other downstream 3273719 26821688 ~ 26825064 (-)
LOC120549744 NA other downstream 4730916 25332890 ~ 25367867 (-)
LOC120549387 NA other upstream 574221 30681927 ~ 30703278 (-)
G207202 NA other upstream 1075317 31183023 ~ 31183555 (-)
G207327 arhgap5 other upstream 1868112 31975818 ~ 31979760 (-)
G207670 NA other upstream 2501829 32609535 ~ 32691885 (-)
LOC120549602 klhl18,LOC102789664 other upstream 2566247 32673953 ~ 32681902 (-)

Expression



Co-expression Network