LOC120549779


Basic Information

Item Value
gene id LOC120549779
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 25282522 ~ 25284535 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039786908.1
ATGTTGGAAAAATCCAGTAGTGTAACGTTATCTCATTTCCTTCCTGTCTTTACCGTTGTTATTGTCCTGAGGGGTGTTGCTTCCGGAGTAGGTAGGCTCTAAATTCTCCGAACTGTAGTCCGCCCGACTTGATAGGATGATCTACTGCACGACATCATGGCCTGCTTGCAACTGACTGTTTTTGTGCCGATGAAGGTAATGACAATGACTATTTTAATGTCAGTGATTTTGTTCTTTTCTATAACGACAGGATTTGGCATGGAACAGACTGGTGTCTGTAGGCCTTTTTGTACTGGGAGTGACTGCATAACAGTTGATCAAGACAGAGTGGATTTTCAAACAGCTGAGGAAGCATGCCGTGACAGGAACGGGGAACTAATGACATTTTCGTCTGAGACAGATGAGAGCACCATAAACAGTTTGAGACAAGAATTGTATGGAAACTTCTGGATTGGACTGCGTTTACCAGCTTCTGCCTGCAGCAACCTTTCAGTTCCACTGAGAGGCTATAAGTGGACCTCTGATAATGTGCACAGTAGCTTTATTCCATCCTTTAGCACATGGAAAGACAGTGTTAAAGTCTGCTCTCCACGCTGTGTGTCACTTTCAAATGGTCAAAAGTGGACAGAGAGGCTTTGCTCAGACAAAACGGATGGGTTTCTGTGCAAAACGAAGCACAAAGATGCATGCCAGGCACAAGAATTATCCGATCCTAATGTTATCAAAAGCTCTAAAGGCTGTAAAGGTGGTCCTTGTGAACATACATGCACAGATGTAAAAGGAGGTTATATATGCTCTTGTTACAGTGGCTATATCCCAGACAGCAAGAACCCCGAGGAGTGCAAATTACACTGTCCACAACATAAATGCCCAGCGAAATGTCAGGGAAAAACAAGCGAATGCTACTGTCCTGATGGCTTTCTATTAAGTGATACATTTTGTGAGGACATTGATGAATGTTTGAATGGTGGATGTGATCAAGAGTGTAAAAACACTTTTGGAAGTTTTGTGTGCTCCTGCAGAAAAGGATTTGTACTAAAAAATGAAGTCAAATGCGTCAAAGCAAAGGGCAGCGAAAGTTTTGCTGTCACAACTCCTATCGTCATAGCTTTTGTTAAACCAGCCACCAATAATCATACACTGAAGGGTTCTTCTGCGCCTGCTGGTGGGTTTCTCTGGATatggatttttgttgttgtggctgTGGTAGTGTTTATATTTGTGATAAGGTTTTATGTTGTAAAGCagcagaagcgcagagaacaAAACTCCAATCAGCCGTCAACTGCTCCTGTGGAGAATATTGAGTGTTAATTCCATTCCAAACGATGATCACCAACTCCACTGGTCCCTTTGGCATTTCAAGTTTGGGAGACTCCATTACATTTATCAGATGGCTGCAGTCTGTAACTTCTCAGAATAAACTTTTTTGAGTAACAGGTTTTTTTGTCAAGGTAATgcattataaaataataataataataatatgaattaatatgaattcattttaaataaaggGGGACTGTTTCAGAAGTGGATGAACTGGGATACTTAGTTCCTCATATGCATAATTAAAAGCAAGTCATTTAAAAGTTTAACTTGGATAAAATAGCCTATACGCATACTACATATTATGCAATTGCAGCGTATAAGACATATTTTCATGAGAGGTAATTTTATATGTGGTAGTCAGAAAATCCTAATTATTCTCATTTTATGAGTTAAGCATATGTTTCATAAGTAAAATGCTAATCTGAAAATGGAATTTCTCAGGGATAGTGCTAGCTCCTTAAAGTGTCAATGTGAATGTACTGTGTTCTTTCCAACACTGAATTTTTCTTTAAACATTATTATCTGtgcatatagcctacatttaactGTTTGTAAAATATGAGTTTTGAAGTACATGAGTGAAATGGTCTATAATATGGGACTCTAGAGGGTgatttcatgtcattttctgttcCTTTGTGTATCATGACATGAAATTAAAATTTGAAGTCATTCATAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039786908.1 True 2014 mRNA 0.39 1 25282522 25284535

Neighbor

gene id symbol gene type direction distance location
LOC120549632 LOC103365837,LOC101071868 coding downstream 196671 25080033 ~ 25085851 (-)
rhd LOC103370138,LOC104956406,LOC108237237 coding downstream 512842 24765124 ~ 24769680 (-)
fam167b fam167b,LOC105925981 coding downstream 737640 24543000 ~ 24544882 (-)
lck lck coding downstream 742362 24527287 ~ 24540160 (-)
LOC120549589 hdac1,LOC104919311,LOC102207424,LOC103153388,LOC108237416 coding downstream 755890 24519641 ~ 24526632 (-)
LOC120549778 NA coding upstream 56 25284591 ~ 25287060 (-)
tpo NA coding upstream 84982 25369517 ~ 25393817 (-)
sntg2 sntg2 coding upstream 117977 25402512 ~ 25482994 (-)
kiaa1109 kiaa1109 coding upstream 210690 25495225 ~ 25587817 (-)
c9orf72 LOC103354026,LOC101465392 coding upstream 307126 25591661 ~ 25607134 (-)
G205941 NA non-coding downstream 15487 25266831 ~ 25267035 (-)
G205937 NA non-coding downstream 46801 25234296 ~ 25235721 (-)
G205887 NA non-coding downstream 133416 25116784 ~ 25149106 (-)
G205888 NA non-coding downstream 151542 25117095 ~ 25130980 (-)
G205854 NA non-coding downstream 212186 25070015 ~ 25070336 (-)
G205978 NA non-coding upstream 104616 25389151 ~ 25389389 (-)
LOC120549113 LOC103354038 non-coding upstream 507022 25791557 ~ 25795395 (-)
G206111 NA non-coding upstream 612281 25896816 ~ 25897191 (-)
G206151 NA non-coding upstream 999840 26284375 ~ 26284746 (-)
G206182 NA non-coding upstream 1338541 26623076 ~ 26653296 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other downstream 208398 25072355 ~ 25074124 (-)
G205845 bsdc1 other downstream 325481 24953206 ~ 24957041 (-)
fndc5a fndc5,LOC108237574 other downstream 405177 24843721 ~ 24877345 (-)
rsrp1 NA other downstream 527101 24752153 ~ 24755421 (-)
runx3 runx3 other downstream 617752 24615918 ~ 24664770 (-)
LOC120549744 NA other upstream 48355 25332890 ~ 25367867 (-)
G206198 fbxo33,LOC102800092 other upstream 1537153 26821688 ~ 26825064 (-)
LOC120549840 NA other upstream 2727504 28012039 ~ 28034752 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other upstream 2761670 28046205 ~ 28204448 (-)
G206919 ccdc88c other upstream 4649727 29934262 ~ 29934566 (-)

Expression


Co-expression Network