LOC120549835 (LOC103353749)


Basic Information

Item Value
gene id LOC120549835
gene name LOC103353749
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 23717891 ~ 23742976 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787010.1
GAactgaaaggagagagagagagagagagagagagagagagagagagcagagcttGTGATGGCTCTTGGCACAACTCAGTAGCCAGCAAAAGTGGACACTACAAGCGGGCCACACAGGCCAGAGGATAATTAGTGGATACGTCACTGCTTTAGTGCCTTTCCTCTAGGATTACCTTTGGTGTGACTACTGATTGCTCAAACCTGGAGACAACACAACAGCAGTGCAGGTAGAAGATGAGGACCAAAAGCAGCGGGGTGGAGAGCCCGGCCAATGGGGTGCGTGGTGTTCCACAGGGTGACCATGACATCAGCCAAGAACAGGAAGTGGGTCTGCCCGTGAAGAGCCTAAAGTCCAAAGTTCAGCAGAAGGAGGATAAGGATAATTTGGAGGTCGAGGTGATctctgaaaaaaagaagatattaTTTGACTCCCCTGAGGCTGGAGAACAAAGAGGAAACATCATGGATCTGTCCAAAGAGGATCTATTGAAACTGCTGGGGATAATGGAAGGAGAGGTTCAGGCCAGAGAAGATGTTATCTGCATGCTAAAGTCCAAACAGACTGTCCCAGAGGACCTTGAATCACGTTATGGATCTACAGCCCCTGGTTCGGCTCTCACGGCCCTGCAGAGGGATGGCTTCATCACTGGCAGCAAGCCGGACGACCACAGTGTATACCAGAAGCCTATGGTTGAGCTGGAGCGTCTGCAGGAGAAGCACAAGGAGACGTATCGGAGGATGCTGGGTCAGTTGCTGCTAGCTGAAAAGTGCCACCGACGCACTGTCCACGAGCTGGACACtgagaaacacaaacacgcagACTACATGAACAAGAGCGATGACTTCACCAACCTTCTGgagcaggagagagaaagACTGAAGAGGTTGCTTGAGAACGAGAAGGCCTACCAGGTGAGAAAGGAGAGCGAGCACTCTAAACGTCTGGCCAAGGTGCAAGAGGAGCTGGTTAAGCTGAAGTCCTTTGCCCTGATGTTAGTCAATGAGCGACAGCAACACCTGGAGCAAATGGATCAACAGAGCCAGCGGGCCCAGGAACTCAGCCAGCAGCACCAGCAGTGGGAGCAGGCACTGAGTGAAGCCAGGGAACGTGCTCAGGAGGATGGCCACAGGGTGCTGAGCCTGGAGGCTGAACTTAAAGAGAAATCTGCCAAGCTTACCCAACAACACGAGGAGATGAGTGCCAAGCTGGCCAGTCAGGAGATCCACAATCGTCAACTAAATGCCAATCTTTTAGGGCTCACGCATAAAGTGGAGGAGCTAGAGGAGAGCAACAGGGCTCTGAGGAAATCTGAGGAGGAGCTACAGGAGCTGAGGGAGAAGATCAGTAAAGGGGAGTCTGGCAACTTCAACTTGATTACTGAGTTGGAAAACTTACGGAAGCGGGTGCTGGAGATGGAGGGAAAGGATGAGGAGATTACCAAGACTGAAAATCAGTGTAAGGAGCTCAGAAAGAGGCTACAAGAGGAGGATAGTAGGAGCAAAGACCTCAGGCTGGAAGTGGAGACGCTCCAGAAAAGAATGATAGAGTTAGAGAAACTTGAGGGTGCCTTCAGCATAAGCAAGGCTGAGTGTGCACAGTTGCACACTGCTCTAGAGACAGAGAAGGACCTCACCAAAGAGCTCTCAGATGAAGTAGTAGCTCTCAAGATCCGTATGAAAGAGGTAGAGTCTTCTGAACTCAAATTAGAAAAGTGTGAGCTGAGCCTTAAGGACGACTTGAGTAAGCTGAAATCATTGACTGTTGCTTTGATGGAAGAACGAAAGACCCTAATGGAAAGAATGAAGTCAGACGAGAAGAAAAAGGACGATTTGAGTAAGATGGTCACAGTTGAGCAGGGAAAAGTTATGGAGGTGACTGAGAAATTGATAGAGGAAAGCAAAAAGCTATTGAAGTTGAAATCAGAGATGGAAACCAAAGTAGAGACTCTATCCATAGAAAAAGGGGATCTTAGCACAAAGCTAGCCTACGAAATCGATAAAACTAAGGATCTTAGTTCTAAGGTCAGTCAGATGAAAAAGAGGTTAGATGGGTTCGAACAAGCAGAAAAGCTATCAGTAAATAATTCAGTGAAATGTGAACTAGGCAGAATGTCTGACCCCCTCAAAAGAGAAGACAACAAAGTTAAGGAGctgacatttgaaattgaacgCCTGAAAAATCGTCTCAAACAACTTGAAGTAGTTGAGGGAGATTTGATCAAGACAGAGGATCAGTACGACATGTTGGAGAAAAGGTTCATGACCGAACAAGACAAAGCCAACATTCTTTCCCAACAGGTGGAGGAAATGAGGGGCCAGATAGCACGGAACAAAGCAATtgagaaaggagaggaggaatgCCAGGAAGTAGACCTCCGACAGCAATGTAAAAGAGAGGAGGCCAAAACCAGGGAACTGCAAGCGGACATCGTAGCCCTCAAGGAGAAGATCCATGAACTGATGCACAAGGAAGACCAACTTTCTCAGCTCCAAGTGGATTACTCTGTCCTGCAGCAGAGGTTCttggaagaggaagagagagccAAGAACATGGGCACTGAAGTTTTCCATCTCACCAAAGAATTGGAGATAGCAAAACGTCATAGTCGAGCACTGAGGCCCAGTTTGAATGGGAGGAGGATGGTGGACGTTGCTGTGACATCCACTGGAGTACAGACAGAAGCATCATCCACTGGGCCAGCAGAGGAGGATACCCCAGCTGTGTTTATCAGGAAGTCTGTTCAAGAAGAGAATCACATTATGAACAACCTCAGACAGAAGTGCCTGAAAAAGCCAACAGATAAAAGTGGTGTTGAGCGTTGCCCTTCATCTAGCAGCGACCTGGGTGTAAAGAAATCCTGGATTCCCTGGATGAGGAAAAAGGACAACACACTTCAGGAGTCTACCTTGGGGAAGCATATGCACATTAATGGAGATAATTTGCCTTCTGAACTGACCATGTCCCAAAAGCAAGGGCAGCCTTTACACATCCGCGTAACACCAGACCACCAAAACAACACGGCCACTCTTGAGATCAGCAGCCCCACTACTGAGGATGCTTTCTCTAGCTCAGCTCCCCTCAGCCCCAATCCATCTCAACCTAAATCCAGAATCACAATCATTCCCACCTACTCTGCTCCAACCCACAAAAGAAAGTCAACCACTGGACCTCATGGCCCTGAAAGAGCCAAGTCTCCAGTCACCATCACAACAATGTCCAGAGCCAAGTCTCCAGAAAGCAGCCGAGCCCCCTCCTCTGCCTCAGGAAGACCCTTGTCCCCTGTCTCTATTATGACAGTGAGCACTACTATAGTGCCTGAAGCATCTGCCTCCCCTGAACCCCAAGAGATGACCATGGGCCGAGCTGTGTATAAGGTTACCCCTGAGAAGCAGATGGTCCCAATGCCTATAAGGAAGGGTCACAGCAACACTAgcatcatcaccaccactgaTGATAACAAGATCCATATTCATCTAGGCAACAGCATGACCTCAAAGATGGTAGTCAGGCCGGTGCCTGCTGCAACAGAGAGCAAGGAAATGACCTTATCAACTGGGACAGTTTTACGCTCCCCCCGCCAAATCACCACCACCGCTGCCAGGACCACACAGAGCAAAGTGATGAGCACTATCACAATTTCCCCTGTTACATCCACTACTTCCAGACAAAGCATGACTGGGCACGATGCCCAGCCACCTCGCACAGGACTGACCCGCATCCCAATGTCCAAGAGCCTGAAGACGGGGAAGGCTGTGCTGGGATCCCTGGGGATCTCGGGTGGAGTGAAGCTGGAGTCACGAGCTGAGAGTCAGATGAGGATAGAAGTTAAAAAATCCACTGTGAATAGCCATACTTTacaaaatggaggaaaagcttGATTACTACATAATAGTACCAACAAAATACTTAAACATATCTATGGTGCTTCAGAGAGATTTAAACAACAGAAAAGGCACAGaggcatttgttttttaataaacaaGCCATTTCTAATTTTTGTAAAGTCTTTTGTACTTGTATGTTTCATATTCATTTCTGCCATTTATATTGAAACATATTCTCTGtatttacagtgtgtattgtgATAGACATTTGGGTTAAATATTATATCAGGCTGTGTTGCTACTACCTGATTCTTGCTTTGAGTGGATGTCTCACATATAAGGAGGTTGTTGATAATATTTTATAAGGACACATTATAGGTCAAAACACTTGTTTTCatgtaaattatgttttttttttctgtaaaggatttttactgaaatgtattttaaataaatgtgattGCAAAGGGTAGTGTGACATGCTTATATATGAAGGCAAATAAGAAAATGCAGTAAAGACAGAGAATTAATTGTGAACAACTTTGCAAAACAGGCCAGATATATT

Function

NR:

description
PREDICTED: filamin-A-interacting protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787010.1 True 4390 mRNA 0.47 6 23717891 23742976

Neighbor

gene id symbol gene type direction distance location
tmem30aa LOC103353750,LOC104952165 coding downstream 502 23711892 ~ 23717389 (-)
col12a1a col12a1 coding downstream 10522 23650668 ~ 23707369 (-)
dlgap2a dlgap2 coding downstream 199896 23348792 ~ 23517995 (-)
cln8 cln8 coding downstream 376100 23337958 ~ 23341791 (-)
trnai-aau_29 NA coding downstream 388649 23329169 ~ 23329242 (-)
LOC120549330 cldn20,LOC102228876 coding upstream 19358 23762334 ~ 23767849 (-)
LOC120549331 tiam2,scaf8 coding upstream 40004 23782980 ~ 23904648 (-)
ipcef1 cnksr3 coding upstream 161827 23904803 ~ 23914310 (-)
LOC120549247 cnksr3 coding upstream 177215 23920191 ~ 23955284 (-)
LOC120549070 qpct,LOC100700099 coding upstream 214799 23957775 ~ 23965760 (-)
G205493 NA non-coding downstream 143879 23536946 ~ 23574012 (-)
G205492 NA non-coding downstream 157699 23528223 ~ 23560192 (-)
G205494 LOC102076813 non-coding downstream 182328 23529490 ~ 23535563 (-)
G205489 NA non-coding downstream 193577 23518903 ~ 23524314 (-)
LOC120548729 NA non-coding downstream 451237 23255878 ~ 23266654 (-)
LOC120548836 NA non-coding upstream 443820 24186796 ~ 24197384 (-)
G205643 NA non-coding upstream 489666 24232642 ~ 24233109 (-)
LOC120549041 NA non-coding upstream 686998 24429974 ~ 24433833 (-)
G205701 NA non-coding upstream 700843 24443819 ~ 24446396 (-)
G205702 zbtb8a non-coding upstream 732959 24475935 ~ 24476893 (-)
LOC120548654 LOC106573685,LOC106610772 other downstream 7030 23707989 ~ 23710861 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other downstream 483093 23024161 ~ 23234798 (-)
LOC120549684 NA other downstream 770081 22944937 ~ 22947810 (-)
G205380 NA other downstream 780034 22910107 ~ 22937857 (-)
LOC120549283 khdrbs1 other downstream 934419 22778005 ~ 22783472 (-)
runx3 runx3 other upstream 872942 24615918 ~ 24664770 (-)
rsrp1 NA other upstream 1009177 24752153 ~ 24755421 (-)
fndc5a fndc5,LOC108237574 other upstream 1100745 24843721 ~ 24877345 (-)
G205845 bsdc1 other upstream 1210230 24953206 ~ 24957041 (-)
G205866 marcksl1,LOC102222432,LOC104961040,LOC106610887,LOC105925978,LOC102786723 other upstream 1329379 25072355 ~ 25074124 (-)

Expression


Co-expression Network