LOC120548652


Basic Information

Item Value
gene id LOC120548652
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 30332529 ~ 30345406 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637232.1
TCCACCCACTGGAATTTCAACTCCCAATTCCCTACGACCTCCTGGTATTTCCAGCTGCTCAGCCATGGAGGACAGTGTAACGAGTGAGGCAGCTCAGTTGCAACACTTTTCAGGCTAAAAAAGCCTTGTTCTTCAGCCAAGACAGCAACACCGAGCGTTGAGcaccggagcaatcccagaagtgaaacatcgtggatatagattaCAGCTGTCTGTGACTTAAACTGCTCACAGCCTCCAATGGGTAAAAGTCAAAGATCATGGACCATGAGGTAACAGGGGGCTGATGTTGGCTGAGAAGCAGGGTACACCTGGACAGCTCTGCCTCAAGTtgttggacagacagacagacagacagacagacggatagatggatggatcaGTGGACCAACATCGCCACCTCTGGGCCCTGCAGTGATCATTTTATCACACAACTGATCAGTGCTCCTGCTTTCTAGAAAATAATATGTTTTTATCACATTAAACTGGAAAGAATGTGTGTACAGACTAGATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637232.1 True 515 lncRNA 0.48 4 30332529 30345406

Neighbor

gene id symbol gene type direction distance location
hhipl1 hhipl1,LOC104946013,LOC102307847,LOC101469970 coding downstream 224823 30098783 ~ 30107706 (-)
dglucy clg19h14orf159,LOC102307814,LOC101472904,LOC102192187,LOC103371603 coding downstream 301940 30003949 ~ 30030589 (-)
dnal1 dnal1 coding downstream 513925 29812573 ~ 29818604 (-)
tedc1 NA coding downstream 520562 29804770 ~ 29811967 (-)
LOC120549562 LOC102082553,LOC103383726,LOC106521240 coding downstream 576527 29741772 ~ 29756002 (-)
zgc:123321 yipf7,LOC105917875 coding upstream 36333 30381739 ~ 30390072 (-)
dapp1 dapp1 coding upstream 51339 30396745 ~ 30421488 (-)
atp10d atp10d coding upstream 77533 30422939 ~ 30481764 (-)
gabrb1 gabrb1,LOC103364303,LOC108247011,LOC106600539,LOC106926079 coding upstream 154836 30500242 ~ 30571752 (-)
LOC120549895 gnpda2,LOC104934428 coding upstream 344572 30689978 ~ 30697246 (-)
G206966 NA non-coding downstream 138819 30193173 ~ 30193710 (-)
G206958 NA non-coding downstream 233794 30097563 ~ 30098735 (-)
G206925 NA non-coding downstream 369213 29962998 ~ 29963316 (-)
G206922 NA non-coding downstream 379989 29942524 ~ 29952540 (-)
G206918 ccdc88c non-coding downstream 404225 29928026 ~ 29928304 (-)
LOC120549085 NA non-coding upstream 139379 30484785 ~ 30487505 (-)
LOC120549477 NA non-coding upstream 151364 30496770 ~ 30498292 (-)
G207104 daam1,LOC103373422 non-coding upstream 487137 30832543 ~ 30833569 (-)
G207145 NA non-coding upstream 523238 30868644 ~ 30942703 (-)
G207175 NA non-coding upstream 689390 31034796 ~ 31035354 (-)
G206919 ccdc88c other downstream 397963 29934262 ~ 29934566 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other downstream 2128081 28046205 ~ 28204448 (-)
LOC120549840 NA other downstream 2297777 28012039 ~ 28034752 (-)
G206198 fbxo33,LOC102800092 other downstream 3507465 26821688 ~ 26825064 (-)
LOC120549744 NA other downstream 4964662 25332890 ~ 25367867 (-)
LOC120549387 NA other upstream 336521 30681927 ~ 30703278 (-)
G207202 NA other upstream 837617 31183023 ~ 31183555 (-)
G207327 arhgap5 other upstream 1630412 31975818 ~ 31979760 (-)
G207670 NA other upstream 2264129 32609535 ~ 32691885 (-)
LOC120549602 klhl18,LOC102789664 other upstream 2328547 32673953 ~ 32681902 (-)

Expression


Co-expression Network