LOC120549085


Basic Information

Item Value
gene id LOC120549085
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 30484785 ~ 30487505 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637326.1
gccggaaacaacaagagctacgaatGCCATATTATAACACTACTCGAACTCGCAAGACAACATGGGAGCCACTGTCTTGTCCTTGTCTGGAGCACGGTGTGATGCTGAGGAAAGAACAGGCGCTCCTTGACTGAGtctcaGCGGTGATCCAAAATGAAATCCTGCGGTATTTAGCGGACCGTTTTACTGCTTGGTTGGAGGTGGAGAGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637326.1 True 210 lncRNA 0.50 3 30484785 30487505

Neighbor

gene id symbol gene type direction distance location
atp10d atp10d coding downstream 3021 30422939 ~ 30481764 (-)
dapp1 dapp1 coding downstream 63297 30396745 ~ 30421488 (-)
zgc:123321 yipf7,LOC105917875 coding downstream 94713 30381739 ~ 30390072 (-)
hhipl1 hhipl1,LOC104946013,LOC102307847,LOC101469970 coding downstream 377079 30098783 ~ 30107706 (-)
dglucy clg19h14orf159,LOC102307814,LOC101472904,LOC102192187,LOC103371603 coding downstream 454196 30003949 ~ 30030589 (-)
gabrb1 gabrb1,LOC103364303,LOC108247011,LOC106600539,LOC106926079 coding upstream 12737 30500242 ~ 30571752 (-)
LOC120549895 gnpda2,LOC104934428 coding upstream 202473 30689978 ~ 30697246 (-)
LOC120549389 enpep coding upstream 227298 30714803 ~ 30743702 (-)
lrit3b lrit3,LOC102193314,LOC102307793,LOC101466384,LOC105919025 coding upstream 262726 30750231 ~ 30760842 (-)
LOC120548738 jkamp coding upstream 290299 30777804 ~ 30787857 (-)
LOC120548652 NA non-coding downstream 139379 30332529 ~ 30345406 (-)
G206966 NA non-coding downstream 291075 30193173 ~ 30193710 (-)
G206958 NA non-coding downstream 386050 30097563 ~ 30098735 (-)
G206925 NA non-coding downstream 521469 29962998 ~ 29963316 (-)
G206922 NA non-coding downstream 532245 29942524 ~ 29952540 (-)
LOC120549477 NA non-coding upstream 9265 30496770 ~ 30498292 (-)
G207104 daam1,LOC103373422 non-coding upstream 345038 30832543 ~ 30833569 (-)
G207145 NA non-coding upstream 381139 30868644 ~ 30942703 (-)
G207175 NA non-coding upstream 547291 31034796 ~ 31035354 (-)
G207203 NA non-coding upstream 687807 31175312 ~ 31177564 (-)
G206919 ccdc88c other downstream 550219 29934262 ~ 29934566 (-)
LOC120549715 lrfn2,LOC103357516,LOC102785515 other downstream 2280337 28046205 ~ 28204448 (-)
LOC120549840 NA other downstream 2450033 28012039 ~ 28034752 (-)
G206198 fbxo33,LOC102800092 other downstream 3659721 26821688 ~ 26825064 (-)
LOC120549744 NA other downstream 5116918 25332890 ~ 25367867 (-)
LOC120549387 NA other upstream 194422 30681927 ~ 30703278 (-)
G207202 NA other upstream 695518 31183023 ~ 31183555 (-)
G207327 arhgap5 other upstream 1488313 31975818 ~ 31979760 (-)
G207670 NA other upstream 2122030 32609535 ~ 32691885 (-)
LOC120549602 klhl18,LOC102789664 other upstream 2186448 32673953 ~ 32681902 (-)

Expression


Co-expression Network