LOC120549210



Basic Information


Item Value
gene id LOC120549210
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 399083 ~ 399862 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005637351.1
CCAATGAGACGCGTGAATTGCTGCAGTATATCCGTGCACGTCGTAGCCCTGAGATCTCCACAAGTGATTCTCAGACACCGAGCGGAGCCGAGCCAAGGTCAGAGGACTTTGTAGGCAAATTACAGGAATTGTGTCAGAAGAATAACTGGCCTCTACCGTGGTACACCTACCTGGACGCACAGCCTAACCACATTTGCTGTGGCAATGTGACCGTGGTGAGAGATGATGGGGAAATTCTCATACGTCTGACAGGTTACGGGACCTCTAAGAACGCTGCAAAACGTGAAGCAGCTGAACGGATTCTACAACTCACGCTGTCGATTACACGGCTCGCAGACCTAGAGTCTGTGGATTGAAGAGGACCATGTCTGCGACCATAGACACGAGATACACTAACACCACTTCTAACCATTCAGTTATAGCTAACGGAGACTTGTGCTCATGGAGCATGGCTGTGCTCGTGTTGTTGACTGTTATCTTGTTTGTGTATGGCTTGTATTGCATCAATGTGCTATGTACAAGAAAGAGAAGATATGCGAGTTTGCCTGAGATCACAGTATGAATGTACAATGCATGCAAATGTTTCTTTGCAAATAAACACCCAAAGACTTCAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005637351.1 True 614 lncRNA 0.47 3 399083 399862

Neighbor


gene id symbol gene type direction distance location
LOC120549575 NA coding downstream 22696 375236 ~ 376387 (-)
LOC120549547 NA coding downstream 389048 7265 ~ 10035 (-)
LOC120548861 NA coding upstream 299059 698921 ~ 701906 (-)
LOC120548839 NA coding upstream 761818 1161680 ~ 1173622 (-)
LOC120549623 NA coding upstream 800510 1200372 ~ 1200692 (-)
LOC120550115 NA coding upstream 878344 1278206 ~ 1278324 (-)
LOC120550213 NA coding upstream 891890 1291752 ~ 1291870 (-)
G199183 NA non-coding downstream 6807 391599 ~ 392276 (-)
G199141 NA non-coding downstream 196794 201726 ~ 202289 (-)
G199140 NA non-coding downstream 198362 200501 ~ 200721 (-)
G199210 NA non-coding upstream 46299 446161 ~ 447129 (-)
G199212 NA non-coding upstream 56422 456284 ~ 456775 (-)
G199226 NA non-coding upstream 113565 513427 ~ 516078 (-)
G199227 NA non-coding upstream 114542 514404 ~ 518439 (-)
G199230 NA non-coding upstream 121622 521484 ~ 521803 (-)
G199247 NA other upstream 230774 630636 ~ 631498 (-)
G199305 NA other upstream 554145 954007 ~ 958248 (-)
G199358 LOC795194 other upstream 690105 1089967 ~ 1090979 (-)
gphb5 gphb5,LOC104954562,LOC102297584,LOC108250814 other upstream 1662633 2062495 ~ 2093597 (-)
kcnh5b kcnh5,LOC102299992 other upstream 2299665 2699527 ~ 2964911 (-)

Expression



Co-expression Network