LOC120551422


Basic Information

Item Value
gene id LOC120551422
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1027301 ~ 1039369 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU282992
TGTGACAGAGTGAAGGAGAAGGTGCAACTTGTTTTCCTCTGGAGCTCAAAATCTCTTCAGTTCAACCTGCCGCTCATCAGAGATCCAGACAGACTGACATCAGGATTTTTAAAGCCTCATTCCAGCAGAACTTCGACAATGAAGCTGGTTTCAGTCGTCGTCCTGCTCCTGGCTCCAATGTTGACCAGCTGCTACCCTCCTGTTCTGCCCAAGGACTGCAGTGACATCAATAATAATCCAGACACCCAAACCAGTGGAGTGTACACCATCTATCCCATCAGATCCACG
>XM_039788855.1
AGAGTGAAGGAGAAGGTGCAACTTGTTTTCCTCTGGAGCTCAAAATCTCTTCAGTTCAACCTGCCGCTCATCAGAGATCCAGACAGACTGACATCAGGATTTTTAAAGCCTCATTCCAGCAGAACTTCGACAATGAAGCTGGTTTCAGTCGTCGTCCTGCTCCTGGCTCCAATGTTGACCAGCTGCTACCCTCCTGTTCTGCCCAAGGACTGCAGTGACATCAATAATAATCCAGACACCCAAACCAGTGGAGTGTACACCATCTATCCCATCAGATCCACGTATGCCATCCAGgtgtacTGCGACATGAACTCAGAAGGAGGACGCTGGACGGTGTTCCAGACGAGGATGGACGGCACAGTGAACTTCTACAGGGGCTGGGATCAATACAAGACCGGCTTTGGTAACCCTGCTGGAGAGTACTGGCTGGGTCTTGAGAACATCTACCAAttgacacgcaatcgcaagtCCGAGCTGCTGGTCCAAATGGAGGACTTTGAAGGAAACAAAGCGTTCGCTCGTTACTCCTCATTCTTTATCGATGCTGAGTGTGATGGATACAAACTGACTGTTTCTGGATTCTTCAACGGAGGAGCAGGAGACTCCATGAGTTATTTCAACGGAATGAAGTTCTCCACCTTTGACAGAGACCAGGACTCCTCTGGAGGGAACTGTGCCAGATCATTCCTGGGGGCGTTCTGGTACAACAACTGTCAAACTACAAATCCAAACGGTGTTTATCTTTGGGGGGCTGACAGCACTATCCCTAATCCTGGAGTGGATTGGTCCTCCTGGAAAGGTTATAACTACTCCCTGAAGATCATCAGCATGATGATCCGTCCTCTGGTGTAGTTCTCCAGGACCAACGTCCAGCAGAATATCAGCTCATCTCTTgtgatttctttctctttctctcattaaTCATTTAATCTCACAACAGGTTTTATTTTCCTGAAACTGGGCACCAACACAAGAAAACCAACTGATGTCTGTAAATCTTGTTAGAGTCTGTGATGGTTTAAATCAGTCGCAGCTCGCTGCAACGTGGAAGAAAAGTCAGATGTGTCTCCAGTTGGGCGGCTGCAGCAGGAAAGTAGGGCCCATAATCTTTAAATGGAAACACATATATAGTCTGATCAGGTGTTAATCACTGCATGAACTGATAACATGAGtctaaaa

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
TU282992 False 288 lncRNA 0.49 3 1027301 1031575
XM_039788855.1 True 1179 mRNA 0.47 7 1027307 1039369

Neighbor

gene id symbol gene type direction distance location
LOC120551430 atad1 coding upstream 8411 1015297 ~ 1018890 (+)
LOC120551425 NA coding upstream 44563 977736 ~ 982738 (+)
LOC120551418 NA coding upstream 69668 953123 ~ 957633 (+)
LOC120551416 NA coding upstream 115959 901360 ~ 911342 (+)
LOC120551413 NA coding upstream 130081 888988 ~ 897220 (+)
LOC120551421 NA coding downstream 4303 1043672 ~ 1049610 (+)
LOC120551414 NA coding downstream 4325 1043694 ~ 1089160 (+)
ptenb pten coding downstream 141676 1181045 ~ 1193221 (+)
LOC120551397 NA coding downstream 258658 1298027 ~ 1303083 (+)
LOC120551407 NA coding downstream 339282 1378651 ~ 1380831 (+)
G208840 NA non-coding upstream 11565 950663 ~ 1015736 (+)
G208835 NA non-coding upstream 177074 847867 ~ 850227 (+)
G208780 NA non-coding upstream 187941 693994 ~ 839360 (+)
G208785 NA non-coding upstream 220198 788508 ~ 807103 (+)
LOC120551438 NA non-coding upstream 220451 804042 ~ 806850 (+)
G208850 NA non-coding downstream 17517 1056886 ~ 1058428 (+)
LOC120551440 NA non-coding downstream 32211 1071580 ~ 1083434 (+)
G208853 minpp1 non-coding downstream 59946 1099315 ~ 1100848 (+)
LOC120551437 NA non-coding downstream 159553 1198922 ~ 1200173 (+)
G208864 NA non-coding downstream 170054 1209423 ~ 1226685 (+)
G208768 NA other upstream 372081 654899 ~ 655220 (+)
LOC120551434 LOC101484734,LOC101161619,LOC103361136 other upstream 380079 584120 ~ 647222 (+)
LOC120551420 NA other upstream 405532 614865 ~ 621769 (+)
LOC120551395 LOC100696016,LOC101071475 other upstream 469808 325913 ~ 557493 (+)
G208758 LOC104938904 other upstream 477224 536938 ~ 550077 (+)
G208851 minpp1,LOC102795090 other downstream 19473 1058842 ~ 1059440 (+)
G208852 minpp1 other downstream 51178 1090547 ~ 1093597 (+)
lipf lipa other downstream 152926 1192295 ~ 1255677 (+)
G208867 NA other downstream 165221 1204590 ~ 1205248 (+)
stambpl1 NA other downstream 273832 1313201 ~ 1328029 (+)

Expression


Co-expression Network