G208850


Basic Information

Item Value
gene id G208850
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1056886 ~ 1058428 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU282996
CAGGAAAGGGGCGCGGTGGAGAACAATCACCGAAGCGGTCACTTTGCACATAGCCAAAGACATGGTACCCATATATACCGTGGAGAAGACAGGGTTTATAAATTTGATTAAAACCTTAGACGAGAACTGTCAGCGTTTGGTTATTCCTCAGATTTGAATGTATGGTTAATGATTTAGAAAATGGTGCTACTCTCAAGGTGAGTGTTTGTCTCCTTTTAGTCTACTACAAAGTGGGACTTAAAACACAGCTAGGACTTTGATTCCAAGAGggtgttcatttatttattattcatcCCAGAAATGGGGGTTACATTTGTCTGGCTTTTGATTAATTAAAAGCAAAATTTGTTTTAAGTTGTCTACCATTTGTACTTATTTCTTTCCTTAATAAGTAGGGGGGAaaatccccccccaaaaaaatcggaaatcgaattaaaaaaaataaaatcggagattttatttttaggccaatatcgcccagccctagatggaactgagccaccgttaaggttatcaatgtcagctgtgcttctcctactTCCAACGATTGTGTCGCCAGGAGCTGAGGGGAGGAGCGGCAGGAAATTAAAGACTCAAAGACCGAGAGATTTCAGGAGAAACGGGAGCAACGACTGAAGAGGCATTAGCACGACAACTTGCTAAAGAAGCCCAAtggggaccaactacaatcattggatatgaaaaaagtaatttaattacatttaatcGGCTTAGGTGGTGCCCACCACGTCTTGGGTGCTgtgcttaaaggtgcagtaattGATAAAGTGTAAAGCCCGTAATGCCCATTGGTTAATCCGACTAAATCTCGGACCAATGAGCGagcagctgtgttgtgtttaaacccaaTTGTGGCATTCTgtagaaaggagaaagagagcaaaaagaagagagaaagagaacaagCGAAAGactgagtgaaagagagagcaagcagagagaaagagagaccagGAGTAGCACTGTGAGCAGCTATTCCTCCGTCTCCCTGTAGAGTCGGGGAGGACAGTCCCTCCCGTAAAACAGAGATGGCGGCTGAACGAGCAGGAGAACCCAAAATATTAAGGAGAGAAAGCAGCAGTGGGGCCTGTTCCAAGAAGAGTGGGTGCAGCTAAAGGAGAGCTGTCTCCATTGAGGAGGCACACCACGCTGGTTAGGTTGGCCTAGGTTTGCTTTTTGCTGAGTTTACACTTTGCAACAGCAACGTGACGGGGAGGACAGTCCCTCCCGTAAACAGAGATGGAGGCAGAACCAAcaggagaaaaaggagagaaagcagCAGTGGTGCCTGCTAGAAGAACAGCAGGTGCAGCTGAAGGAAAACCAACGATTGGGTCTCCAGGACtggttttccaagatggcgcctacCTGTAAACATGAacagtactgtctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282996 True 1414 lncRNA 0.45 2 1056886 1058428

Neighbor

gene id symbol gene type direction distance location
LOC120551421 NA coding upstream 7276 1043672 ~ 1049610 (+)
LOC120551430 atad1 coding upstream 37996 1015297 ~ 1018890 (+)
LOC120551425 NA coding upstream 74148 977736 ~ 982738 (+)
LOC120551418 NA coding upstream 99253 953123 ~ 957633 (+)
LOC120551416 NA coding upstream 145544 901360 ~ 911342 (+)
ptenb pten coding downstream 122617 1181045 ~ 1193221 (+)
LOC120551397 NA coding downstream 239599 1298027 ~ 1303083 (+)
LOC120551407 NA coding downstream 320223 1378651 ~ 1380831 (+)
LOC120551423 NA coding downstream 326935 1385363 ~ 1398958 (+)
LOC120551406 NA coding downstream 355360 1413788 ~ 1427061 (+)
G208784 NA non-coding upstream 7258 1039125 ~ 1049628 (+)
G208840 NA non-coding upstream 41150 950663 ~ 1015736 (+)
G208835 NA non-coding upstream 206659 847867 ~ 850227 (+)
G208785 NA non-coding upstream 249783 788508 ~ 807103 (+)
LOC120551438 NA non-coding upstream 250036 804042 ~ 806850 (+)
LOC120551440 NA non-coding downstream 13152 1071580 ~ 1083434 (+)
G208853 minpp1 non-coding downstream 40887 1099315 ~ 1100848 (+)
LOC120551437 NA non-coding downstream 140494 1198922 ~ 1200173 (+)
G208864 NA non-coding downstream 150995 1209423 ~ 1226685 (+)
G208885 NA non-coding downstream 253628 1312056 ~ 1335340 (+)
LOC120551422 NA other upstream 17517 1027301 ~ 1039369 (+)
G208768 NA other upstream 401666 654899 ~ 655220 (+)
LOC120551434 LOC101484734,LOC101161619,LOC103361136 other upstream 409664 584120 ~ 647222 (+)
LOC120551420 NA other upstream 435117 614865 ~ 621769 (+)
LOC120551395 LOC100696016,LOC101071475 other upstream 499393 325913 ~ 557493 (+)
G208851 minpp1,LOC102795090 other downstream 414 1058842 ~ 1059440 (+)
G208852 minpp1 other downstream 32119 1090547 ~ 1093597 (+)
lipf lipa other downstream 133867 1192295 ~ 1255677 (+)
G208867 NA other downstream 146162 1204590 ~ 1205248 (+)
stambpl1 NA other downstream 254773 1313201 ~ 1328029 (+)

Expression


Co-expression Network