G208888


Basic Information

Item Value
gene id G208888
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1334982 ~ 1367880 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU283065
gacagactcagattattattctaagagtctgacaacattatggaaaggatccctacagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacagccccgaaatcaccatcaccaaactacaccagactccatgtaagtaatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcctgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaagtaatcaggacttttagtgtgtatagagccagcatatttccaccagactccatgtaaataatcaggatttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283065 True 672 lncRNA 0.41 2 1334982 1367880

Neighbor

gene id symbol gene type direction distance location
LOC120551397 NA coding upstream 31899 1298027 ~ 1303083 (+)
ptenb pten coding upstream 141761 1181045 ~ 1193221 (+)
LOC120551414 NA coding upstream 245822 1043694 ~ 1089160 (+)
LOC120551421 NA coding upstream 285372 1043672 ~ 1049610 (+)
LOC120551430 atad1 coding upstream 316092 1015297 ~ 1018890 (+)
LOC120551407 NA coding downstream 10771 1378651 ~ 1380831 (+)
LOC120551423 NA coding downstream 17483 1385363 ~ 1398958 (+)
LOC120551406 NA coding downstream 45908 1413788 ~ 1427061 (+)
LOC120551410 NA coding downstream 62592 1430472 ~ 1437585 (+)
LOC120551412 NA coding downstream 93394 1461274 ~ 1464607 (+)
G208887 acta2,LOC107594158,LOC105896556,LOC101064889,LOC103374497 non-coding upstream 1432 1332746 ~ 1333550 (+)
G208864 NA non-coding upstream 108297 1209423 ~ 1226685 (+)
LOC120551437 NA non-coding upstream 134809 1198922 ~ 1200173 (+)
G208853 minpp1 non-coding upstream 234134 1099315 ~ 1100848 (+)
LOC120551440 NA non-coding upstream 251548 1071580 ~ 1083434 (+)
G208914 NA non-coding downstream 123810 1491690 ~ 1492031 (+)
LOC120550773 NA non-coding downstream 139461 1507341 ~ 1529819 (+)
G208916 NA non-coding downstream 160431 1528311 ~ 1614871 (+)
G208917 NA non-coding downstream 180893 1548773 ~ 1550127 (+)
G208912 NA non-coding downstream 209033 1576913 ~ 1634480 (+)
stambpl1 NA other upstream 6953 1313201 ~ 1328029 (+)
lipf lipa other upstream 79305 1192295 ~ 1255677 (+)
G208867 NA other upstream 129734 1204590 ~ 1205248 (+)
G208852 minpp1 other upstream 241385 1090547 ~ 1093597 (+)
G208851 minpp1,LOC102795090 other upstream 275542 1058842 ~ 1059440 (+)
G208777 NA other downstream 62629 1430509 ~ 1493181 (+)
G208911 NA other downstream 98138 1466018 ~ 1571837 (+)
LOC120550772 NA other downstream 130567 1498447 ~ 1577370 (+)
LOC120550774 NA other downstream 226601 1594481 ~ 1616080 (+)
noc3l noc3l other downstream 248842 1616722 ~ 1636135 (+)

Expression


Co-expression Network