G208931


Basic Information

Item Value
gene id G208931
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1761289 ~ 1762182 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU283113
cacacagagagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacaaagacacacacacacatacacacagaggcacacacacacacacaagagacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacagacacatacacacacacacacacacac

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0015629 actin cytoskeleton cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283113 True 224 lncRNA 0.49 2 1761289 1762182

Neighbor

gene id symbol gene type direction distance location
rpp30 rpp30,LOC102790171 coding upstream 97825 1648435 ~ 1663464 (+)
LOC120550771 LOC103374694 coding upstream 168545 1553857 ~ 1592744 (+)
LOC120551417 NA coding upstream 263622 1490162 ~ 1497667 (+)
LOC120551412 NA coding upstream 296682 1461274 ~ 1464607 (+)
LOC120551410 NA coding upstream 323704 1430472 ~ 1437585 (+)
LOC120551573 NA coding downstream 230795 1992977 ~ 2006545 (+)
LOC120551574 idh3a,LOC103375458,LOC106534100 coding downstream 515718 2277900 ~ 2298804 (+)
LOC120551177 LOC100692392,LOC106609700,LOC107593142,LOC107585968 coding downstream 540109 2302291 ~ 2312449 (+)
LOC120551356 LOC107387424,LOC101064220 coding downstream 764480 2526662 ~ 2533463 (+)
LOC120551583 NA coding downstream 1824897 3587079 ~ 3621179 (+)
G208907 NA non-coding upstream 63141 1678726 ~ 1698148 (+)
G208908 NA non-coding upstream 122831 1620734 ~ 1638458 (+)
G208912 NA non-coding upstream 126809 1576913 ~ 1634480 (+)
G208936 NA non-coding downstream 78444 1840626 ~ 1843454 (+)
G208938 NA non-coding downstream 86921 1849103 ~ 1927193 (+)
G208941 NA non-coding downstream 97315 1859497 ~ 1898988 (+)
G208945 NA non-coding downstream 185128 1947310 ~ 1952151 (+)
G208950 NA non-coding downstream 203293 1965475 ~ 1966728 (+)
noc3l noc3l other upstream 125154 1616722 ~ 1636135 (+)
LOC120550774 NA other upstream 145209 1594481 ~ 1616080 (+)
LOC120550772 NA other upstream 183919 1498447 ~ 1577370 (+)
G208911 NA other upstream 189452 1466018 ~ 1571837 (+)
G208777 NA other upstream 268108 1430509 ~ 1493181 (+)
G209284 LOC108247036,LOC103364826,LOC106530008 other downstream 569996 2332178 ~ 2334285 (+)
LOC120551576 lrch1,LOC106582244 other downstream 582099 2344281 ~ 2362359 (+)
G209344 NA other downstream 909093 2671275 ~ 2833674 (+)
G209514 NA other downstream 1883827 3646009 ~ 3646997 (+)
LOC120550571 NA other downstream 2056671 3818853 ~ 3823251 (+)

Expression


Co-expression Network