G208936


Basic Information

Item Value
gene id G208936
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1840626 ~ 1843454 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU283119
ACAGAGTCTGAAGTGACTTGCTGACTTTATTCATCGAGTGCAGCCGACAGTCATCCAACGAGATTTACATTCAAAACAAAACGAGTGGAGCCGACCGGACACGTCAGCTTTGATTGACAGCGCTATAAATTTGTGAAGACATTAACgttcagttttcttttctttttttttggataCAAAACAATGGTTTGTTTTCAGTGTGGCACcaccacatatacacacacacacacacaggtttaatAACAACATGACTCAACATCCATTTATACAAAACAATCTGagatataaatacatatttatcaTCTGTATGTTACAAAAAGAGTTCCCTCGGTGACGTGATCAAACACAGTGACGTATAAATATTCAGCCAAAAATCACAAAACccacagagaaaacacaagggggcggggcttggaTGCATGGGCGGGGCTTAAGTGTTCAGGGCGGGGCttagggaggaggaggaggagctagaataaaaaaagacaacgcTGAACAAGAAGACAGAGAGTAACAGTAGCCTATCAGGATGCAGGATTTGTTTGTACAGtgtgatgatgaaataaaaGACAAGATAAAAGTAAATCAACAAACAGGCAGAGGTGAGAAGTCACTGAAACTGCTCAACCCCCCAAAAGATTCTTGTTAGAAACTCGTTCATCTGCTAAATTCTAGTTTTTACAATACCCTCTGGactgtgattggctgacagcagcagaggtgaactagcctggctctgccctccTACGTACATCCGCTCAAttctttcattttccttcagtacattgtctgggtttgcggtatatttttgggttttctccggtccaatcagcaaacagagggaggggctgagaacgatgactttgaggttgtgcgctagttAGAGTTGTATTTCCGTAATggtggcggagaaagatgcgagcgaagccattccgtctgttgtggcaacgctgccgaatatccacaagttaaagcccgagcaagaacagtctttgctgagttgtgttggtggccatgatgtcgtgGCTCTCCTCCCCACGGCGTTCAGGaaggctaaggctaacgctagcgatgctaaggctaacgctagcgatgctaagcccacgtcacgaccaaatgttagcgattggttcttggagatccagagtggctctgagCAGATCCAAtaattttaaacttcaacagagtacccgccttcaagttaacacttgtcaatggagagtggccagactctctggaccactgaaatggaccagagtctggtaggaccaggctaatggaccagagtctggtaggaccaggctagtgtaccagagtctggtaggaccaggctaatggaccagagtctggtaggaccaggctagtgtaccagagtctggaagGACCAGGCTACtctggaccagagtctggtaggaccaggctgatgtaccagagtctggtaggaccaggctactcTGGGCCAGAgactggtaggaccaggcttatgtaccagagtctggtaggaccaggctgacgtaccagagtctggtaggaccaggctactcTGGGCCAGAgactggtaggaccaggctgatgtaccagagtctggtaggaccaggctagtgcaccagagtctggtagaCTAGgttaatgtaccagagtctggtgggaccaggctaatggaccagagtctggtaggaccagactgatgtaccagagtctggtaggaccagGCTACtctggaccagagtctggtaggaccaggctgatgtaccagagtctggtgggaccaggctaatggaccaaagtatggtaGGACTAGGCTACTCtcgaccagagtctggtaggaccaggctagtgtaccagaatCTGTGGTGTCAGACAGAACGGAAGAACTAATTTCCGAGTTGGGAAATGCGTATGGATGCCTGCTGAAGTTGGAACAACACATCAGAAACTCAGGAAAGATTTGGGTGCTAACTTGCTGACTTGAAGTCATTTGTGTCATTAAcgctaaaaatgtttttatcaattcatatattttataactttttgCTTGGATATTATGTTTAATACGGTGTTACCGTCAGCTCtacctccacagctctgtggaggagggtctgactagtcctcacagcattcctggattggagaacaacgtgctctggtttattggcatttctttgaaccaatcacaatcgtcgtgggcggggctaagctccggacggagccacggtgcctctgctaaatagtctcaggaaggaacatgttttggtggaacatgtggacgctcaaaagtagttttagtcgtgcaacagaagcATATTGTCTCAGAGTTCAGTATTCACCTCTTTTGCAGCGGACCAATTAGCTGTGAGAATAGATTCTGTCAAAACAAAGGCGGATTTAAATGTGACCATAAAAATAATCAGTGTGACGTTAATGAGGAACAACAGGGGACCAAACACTGAGCCCTGAGGAACTCCACTTTCAACACACGGTTGTTTAACGTCCTCAATTTTCAGCTCACGTTTGGATAAGTTCCCCAAAATTACATCACAAGTAGAGGAAATGATGTCACAGTTTGTACACAGAGTTAAACATGAGAACATTTACAGAAAagtccttttttaaattattttctttgttaGAAACCGGAGCCTTCGTCCAGTGAGTTTATTTCGTTTCTTTTTTACTGTGACGGAGACGCTCGATACTCCGTCCTGACTGGTCAGCTGCTGCCTGAGGCCCCGCCCCCTCTGAGGTGATTGGTGCTCGTGGCTGAGGGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283119 True 2771 lncRNA 0.47 2 1840626 1843454

Neighbor

gene id symbol gene type direction distance location
rpp30 rpp30,LOC102790171 coding upstream 177162 1648435 ~ 1663464 (+)
LOC120550771 LOC103374694 coding upstream 247882 1553857 ~ 1592744 (+)
LOC120551417 NA coding upstream 342959 1490162 ~ 1497667 (+)
LOC120551412 NA coding upstream 376019 1461274 ~ 1464607 (+)
LOC120551410 NA coding upstream 403041 1430472 ~ 1437585 (+)
LOC120551573 NA coding downstream 149523 1992977 ~ 2006545 (+)
LOC120551574 idh3a,LOC103375458,LOC106534100 coding downstream 434446 2277900 ~ 2298804 (+)
LOC120551177 LOC100692392,LOC106609700,LOC107593142,LOC107585968 coding downstream 458837 2302291 ~ 2312449 (+)
LOC120551356 LOC107387424,LOC101064220 coding downstream 683208 2526662 ~ 2533463 (+)
LOC120551583 NA coding downstream 1743625 3587079 ~ 3621179 (+)
G208930 NA non-coding upstream 75838 1757680 ~ 1764788 (+)
G208931 NA non-coding upstream 78444 1761289 ~ 1762182 (+)
G208907 NA non-coding upstream 142478 1678726 ~ 1698148 (+)
G208908 NA non-coding upstream 202168 1620734 ~ 1638458 (+)
G208912 NA non-coding upstream 206146 1576913 ~ 1634480 (+)
G208938 NA non-coding downstream 5649 1849103 ~ 1927193 (+)
G208941 NA non-coding downstream 16043 1859497 ~ 1898988 (+)
G208945 NA non-coding downstream 103856 1947310 ~ 1952151 (+)
G208950 NA non-coding downstream 122021 1965475 ~ 1966728 (+)
G208960 NA non-coding downstream 143116 1986570 ~ 1986913 (+)
noc3l noc3l other upstream 204491 1616722 ~ 1636135 (+)
LOC120550774 NA other upstream 224546 1594481 ~ 1616080 (+)
LOC120550772 NA other upstream 263256 1498447 ~ 1577370 (+)
G208911 NA other upstream 268789 1466018 ~ 1571837 (+)
G208777 NA other upstream 347445 1430509 ~ 1493181 (+)
G209284 LOC108247036,LOC103364826,LOC106530008 other downstream 488724 2332178 ~ 2334285 (+)
LOC120551576 lrch1,LOC106582244 other downstream 500827 2344281 ~ 2362359 (+)
G209344 NA other downstream 827821 2671275 ~ 2833674 (+)
G209514 NA other downstream 1802555 3646009 ~ 3646997 (+)
LOC120550571 NA other downstream 1975399 3818853 ~ 3823251 (+)

Expression


Co-expression Network