G208963


Basic Information

Item Value
gene id G208963
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 2007295 ~ 2009130 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU283153
CTGGCGGTGAAAGCGTTGCTATGGTTTCGGATGGGTCTCACCGATCCTCTGACGTGAGTTTTGTTGTAGCTGTTTATCTCGGGAGAGGTCAGCGGCTTGAACAACCGGCCTGGGGAGGAACACACTAACTCTTCATCAGGAATCACAGCTGGCTGCTGTACAACACTAAGACTTCATCAGGAATCACAGCTGGCTGCTTTACAACGCTGACTTCAAACTTCAAGAAAACGAACTGTCTGCTACAGTGTTTCTCCATCAATGGGCAATTtagattttggctcccaacgatcacaaaaacagagcagTCGAGAACAACTGTTATTCTGCACATTACGTTTAAAGTAaagtcttattttgtcttgggTTCTGAATGAAAAGTCTGACGGTAAATatatactcagcaaaaaaagaaacgtcctctcactttcaactgcttttattttcagccaacattaaaaaatttaactactaagaactaaacaatgtttcacagacatgtgactaacagaaatgtaaaaatgcatccctgaacaaaggatggtcaaaatcaaaagttacagtcagtatctggtgtggccAGGAATCCTGTTCAATAATCCTTATTTCAACACTGACGTAAACTATCATGATGATAATTTTCTCCATAACCGAGCAGCTCTACATTAAAGTGAAATACAAACTCTTGAAAGCATCAGACGGGAGAAAACCAGAATCCACCGCGTCCCTCTTCCTTACAGACGACGTGTCTGGATGCTTTCACTTTTTATCGATGAAACTGGATGGTAGCATCGTAGATCGATGTTTGCTTACAGCCCTGATGAACACGCCATTAACCCAGGGAGAAAACTTGCTGGATTGGATCATTAAAGTGAAAAGCAGAAGATGAACATCATCACAACCtagatgtgtgtatgtctaaAGTCTAAGTAATGATGTGTAAGTAACTCTAAAAGTGGCGTGGGGAAGCTTTGGCAGTTACTTTTTTACAGTAACTTTTTGCAGGATGCTTTGACTACCGAGAAAACCGACTGCAGCTGATCAGACCCAGGGGAAAACTCAGTTTCATCGTTACCAAACCCACCACGTCCTGTTACTAACCGATAATATAtatgatgttaaaccctaatgGTCCCTAATGGTCCCTAATGCGTCCTGTTCCCAACAGATAATATGTATGGATATTAAACCCTAATGTTCCCTAATGGTCCCTAATGCGTGCTGTTCCTAACAGATAATATGTATGGATATTAAACCCTAATGTTCCCTAATGGTCCCTAATGCGTGCTGTTCCTAACAGATAATATGTATGGATATTAAACCCTAATGTTCCCTAATGGTCCCTAATGCGTCCTGTTCCTAACAGTTAATATGTATGGATAATAAACCCTGACCCACCGCATCCCTGGTCCTGGCTGCTGCATGGCGCCGTGTTGGAGGACGAGATGTGGTCTGTGTGGACGGAGAGGACGCGTCTCCAGAAAGCTTGAGGGAGGGACAACAAGCGGCAGATCACCTGGAGACAAAAAGACACAATGAACCGGACAGGGATTCATCTTGTTCAGTGTAGTCCAGAACCCCTAAACCAAGACCAAGATATTACAAAGACCAGAATCCCCAAAACCAAGACCAAGATATCACCAAGACCAGAACGTATCGACAGTTCACATGTTTATCCTCCCAAAGATAGTCAGTAATTATAACGTCTACATATAATGTCAAGtcaagttactttatttgtcCCCCAGTGGGGGCAATTTGTTATGTAGCAGGTAGTATAATAAaatcacacacaatacagagattgCCTACCTTTCAg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283153 True 1816 lncRNA 0.42 2 2007295 2009130

Neighbor

gene id symbol gene type direction distance location
LOC120551573 NA coding upstream 750 1992977 ~ 2006545 (+)
rpp30 rpp30,LOC102790171 coding upstream 343831 1648435 ~ 1663464 (+)
LOC120550771 LOC103374694 coding upstream 414551 1553857 ~ 1592744 (+)
LOC120551417 NA coding upstream 509628 1490162 ~ 1497667 (+)
LOC120551412 NA coding upstream 542688 1461274 ~ 1464607 (+)
LOC120551574 idh3a,LOC103375458,LOC106534100 coding downstream 268770 2277900 ~ 2298804 (+)
LOC120551177 LOC100692392,LOC106609700,LOC107593142,LOC107585968 coding downstream 293161 2302291 ~ 2312449 (+)
LOC120551356 LOC107387424,LOC101064220 coding downstream 517532 2526662 ~ 2533463 (+)
LOC120551583 NA coding downstream 1577949 3587079 ~ 3621179 (+)
LOC120551587 NA coding downstream 1661460 3670590 ~ 3687777 (+)
G208962 NA non-coding upstream 4773 2001413 ~ 2002522 (+)
G208960 NA non-coding upstream 20382 1986570 ~ 1986913 (+)
G208950 NA non-coding upstream 40567 1965475 ~ 1966728 (+)
G208945 NA non-coding upstream 55144 1947310 ~ 1952151 (+)
G208938 NA non-coding upstream 80102 1849103 ~ 1927193 (+)
G208970 NA non-coding downstream 22211 2031341 ~ 2031716 (+)
G209234 NA non-coding downstream 38731 2047861 ~ 2094718 (+)
G209237 NA non-coding downstream 67135 2076265 ~ 2077481 (+)
G209275 NA non-coding downstream 242560 2251690 ~ 2269428 (+)
G209281 NA non-coding downstream 291312 2300442 ~ 2301400 (+)
noc3l noc3l other upstream 371160 1616722 ~ 1636135 (+)
LOC120550774 NA other upstream 391215 1594481 ~ 1616080 (+)
LOC120550772 NA other upstream 429925 1498447 ~ 1577370 (+)
G208911 NA other upstream 435458 1466018 ~ 1571837 (+)
G208777 NA other upstream 514114 1430509 ~ 1493181 (+)
G209284 LOC108247036,LOC103364826,LOC106530008 other downstream 323048 2332178 ~ 2334285 (+)
LOC120551576 lrch1,LOC106582244 other downstream 335151 2344281 ~ 2362359 (+)
G209344 NA other downstream 662145 2671275 ~ 2833674 (+)
G209514 NA other downstream 1636879 3646009 ~ 3646997 (+)
LOC120550571 NA other downstream 1809723 3818853 ~ 3823251 (+)

Expression


Co-expression Network