G209715 (cep131,LOC103374585,LOC102786975)


Basic Information

Item Value
gene id G209715
gene name cep131,LOC103374585,LOC102786975
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 4454338 ~ 4455300 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU284227
CTGTGTGATGTCTTCAGTCTCCTGTTCTTTCTGTCGGATCAGGGCCTGGAGTCTAATcagctctccctccatctccatCTGCTGCTTCCTCGACTCCTGTTGTTTCTCCACAGCCGTCCTCTCGGAGCGCTCCAGCTCCCTCAGCTCCGTCTCGTATTTTTCCCTCACACGCTCCTCTTTGTCCTTGCTGGTCTCCTCCTCCAGCGTCCAGATGGCGAGCTCGATCTCTTTGTCGCGTTCTCGCCGCAGCTCTTCTTTCAGTTCACGCTCGCGGCTCAGCATCCAC

Function

symbol description
cep131 Involved in several processes, including Kupffer's vesicle development; intraciliary retrograde transport; and melanosome transport. Acts upstream of or within cilium assembly and epithelial cilium movement involved in determination of left/right asymmetry. Predicted to be located in several cellular components, including acrosomal vesicle; chromosome, centromeric region; and cytoskeleton. Predicted to be active in centriolar satellite. Used to study Bardet-Biedl syndrome. Orthologous to human CEP131 (centrosomal protein 131).

NR:

description
PREDICTED: centrosomal protein of 131 kDa isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284227 True 286 lncRNA 0.57 2 4454338 4455300

Neighbor

gene id symbol gene type direction distance location
LOC120551740 NA coding upstream 42565 4408832 ~ 4411773 (+)
baiap2b baiap2,LOC101465701,LOC102783223 coding upstream 146891 4195773 ~ 4307447 (+)
chmp6b chmp6,LOC103374447,LOC100705156,LOC101486168 coding upstream 271221 4171678 ~ 4183117 (+)
abca5 LOC103361128 coding upstream 294040 4118852 ~ 4160298 (+)
asb3 LOC103361130,LOC104944901 coding upstream 335567 4107220 ~ 4118771 (+)
LOC120551185 LOC104948324,LOC106922417,LOC103150698 coding downstream 201017 4656317 ~ 4670517 (+)
LOC120551365 LOC104929210,LOC103367387 coding downstream 433786 4889086 ~ 4891504 (+)
LOC120550670 NA coding downstream 461649 4916949 ~ 4919967 (+)
plaub NA coding downstream 469383 4924683 ~ 4939821 (+)
hid1b hid1 coding downstream 491670 4946970 ~ 4981418 (+)
G209714 NA non-coding upstream 940 4453164 ~ 4453398 (+)
G209706 NA non-coding upstream 31294 4422061 ~ 4423044 (+)
G209686 NA non-coding upstream 262170 4191914 ~ 4192168 (+)
G209685 NA non-coding upstream 265856 4188093 ~ 4188482 (+)
G209684 NA non-coding upstream 267618 4183573 ~ 4186720 (+)
G209716 NA non-coding downstream 3922 4459222 ~ 4459427 (+)
G209717 NA non-coding downstream 7069 4462369 ~ 4462612 (+)
G209718 NA non-coding downstream 8939 4464239 ~ 4464464 (+)
G209719 NA non-coding downstream 16702 4472002 ~ 4472320 (+)
G209820 NA non-coding downstream 99628 4554928 ~ 4563717 (+)
LOC120551345 plekha1,LOC106957628 other upstream 426056 3998373 ~ 4028282 (+)
LOC120550571 NA other upstream 631087 3818853 ~ 3823251 (+)
G209514 NA other upstream 807341 3646009 ~ 3646997 (+)
G209344 NA other upstream 1620664 2671275 ~ 2833674 (+)
LOC120551576 lrch1,LOC106582244 other upstream 2091979 2344281 ~ 2362359 (+)
map2k6 LOC103367941,LOC105926483,LOC102221885,LOC100697345,LOC103150707 other downstream 218937 4674237 ~ 4716583 (+)
LOC120550763 LOC100696279,LOC101467831,LOC107093968 other downstream 1136035 5591335 ~ 5687896 (+)
LOC120551158 NA other downstream 1359936 5815236 ~ 6259659 (+)
kctd2 kctd2,LOC102796578,LOC107089511,LOC103371831,LOC103398851,LOC106521991 other downstream 1627802 6083102 ~ 6092738 (+)
LOC120551157 NA other downstream 1764569 6219869 ~ 6270445 (+)

Expression


Co-expression Network