G209820


Basic Information

Item Value
gene id G209820
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 4554928 ~ 4563717 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU284356
ggagggggggggggggggggggggggggggggcagtgggTCAAGGGAAAGGGGCCTTACCCAAAAGTGCTTTACCTTAACGAGCCCTGCCACTCAGAGCTGCTGTGAGTCGggatacaaaaaaaatcaaataaaacagtctgggtttattgttatttactCATTGAACTGGATGTAAACGAGTACATCCCTTTCACTGGAGACGGCAGCCTGGGAGATGGGAAGGACAGAGGCTTCAAAGTGAGgcaaaatagtgaaaaaagaaaaaaaaagggcatcCAAATCTCGCAGCGGGTCCTGGTGCAGCGATGTTATTGGCCAGTTAAGAGGAGGGCTCGGCGGGATGAGATCAGGACAGAGCAGggcatggagggagggagggaggtggttgttgttttttaaccgCGGGGCAAGCTGCACATTTCACAGTGCTCTGTGCCGGGCTGGTTCATGAAGGTGCAGTGGAGGCAGGACCACATGGCAGAGGAGGAGGCAGGGGCCGAGGGGCCGCCCATGGCCCCGTAACCCTGAGAGCTGGAAGGCTGCCCGCCCACAGTACCT
>TU284357
AACAAGACAAACtcccaataagtcagcgtgttcctttaaagtgtAAGTTCACTGAAATTattcacaacaaaaacaaaacatttccccACTCAACACCAGTGGCATCTATACATAGGAGTTTGAATTGGTTGCTCTCTGGAGATTTCGGCCTCCTCTTTTCAACTTCCTGTCtataaaaacacatctcaatgCTCTTAGCACCACAAATAAGATTTCATTTACCTCCAGGGAGGTGAAGGCCGAATCTCAGGGACGTGTTAACTGTTAGCGTGGCTAAATAAAACTACAGCTAAGTGAGAAAATGGTTGTTTTCGTTGCACCTTGAACGTGAACTAACCCTTTAAGtggcctgttttttttaatctttagtTTAGCCTTTTTAGTGCCGTTGAGGAGAAGGCATGGGCCCGTTACCAGTTTCAAGGTACAccgcggtttgaaaaagtcacggtttcaaaaccactaacCTTGTCTGTCATTCCGTTCCTAAGGTATGAGCGGTTTTTGTAAGAGTCTTTgaggacagaaagtgcagtttagaaatccctctccctgccagtgtgcagtgagtttctttttttacccagacatttcaaaaacaaaacatttatagCTGTAATTGCGATACCGTGATactgtgatatttttgctgaaggttatcatactgtcagaatctcataccggcccatgcctattAAGGAGCATTAAatgcttttcattgttttcagccCCTTCCACACTTCTGACACCTGTAGCTCTACCAAGTGATCATCATACATGCCTCCTGCTGGAAGAAGCtcaggtgtttgtttttttttatctgcggAAGCAAACACAGACGATGCTCACTTAAAACACGTATCGCCATCATCCTGCTTGCAGATGCACAGCGCAGACATCACCCGTGGTGACACTGTGACCCTTTGCACTCCGAGCAGCAAAGTCTTCGAAGGCTGAGTGacggaaagaaaagaaaagaaaaaaaaccagaGAGGGGGGGCCAATCAGCGGAGGAAGATTGGTTATGGTCTTATTACTTATCGACCGGCGCCAATGCGCGAaatcaaaaagaagaagaaccaCCACAGGTACGGAGCGACAGAGAGGGAAGTGGCGAGCACCAGTTGTTTCTAGAAGCACCTCACGGCCAGTACAGTAATAATTATAAAGAAGGACGATGGATGGAGTCCTGGGGAGTTTTATCAGAGACAGAACATACAGCTGATAAAATAAGCTACATAGAATGCCTGTTCAAGTTCAAAACCACCAAATCGAAAAGCTACAATTCCAACAAAACCAGTGAAAGATCTTAAGAAACCACTTTAAGTTGGTGGGACCATCAGTCTAAACGGTAATAAGCACCAACAGCACACGTTACTTCTGCACTCAGTGGAGGATGATTAAGGGGTggagggggtgggagggggtATGCCTTTTCAACTCTGGGACTTATTTAGGTAATTTAATATTGAAAATATAAACTCTCTACTGAAGCAGAATTACTCTGGAGCTCTTTTAGAGTTTTCAGGTGCGAGCTTTGACCGATGATTGTACTTCAAGGGGCTTGTCAAAGACACCTATAAAAACCTGACTGAGTGGAGTCCACGCTGAAGATTCAAAATGTTAAGGTATCGCTACAAtctgatacaaaaaaaaaagaagcgtAATTAAATAACAGTATCATTCctcaaatgtatttatacacAGCAAGATTTCCCAGAAGACGttgtgagagtgagaggggcACTGATGTGAGAGATCGTCCAAACACTCGAGTCTCTGCTGTTGTCTTGAGTCACAGCGGGCATTTATTTGAGGGGCTGATAATTCAGAGGCGgttgggggcgggggggggggcagtgggTCAAGGGAAAGGGGCCTTACCCAAAAGTGCTTTACCTTAACGAGCCCTGCCACTCAGAGCTGCTGTGAGTCGggatacaaaaaaaatcaaataaaacagtctgggtttattgttatttactCATTGAACTGGATGTAAACGAGTACATCCCTTTCACTGGAGACGGCAGCCTGGGAGATGGGAAGGACAGAGGCTTCAAAGTGAGgcaaaatagtgaaaaaagaaaaaaaaagggcatcCAAATCTCGCAGCGGGTCCTGGTGCAGCGATGTTATTGGCCAGTTAAGAGGAGGGCTCGGCGGGATGAGATCAGGACAGAGCAGggcatggagggagggagggaggtggttgttgttttttaaccgCGGGGCAAGCTGCACATTTCACAGTGCTCTGTGCCGGGCTGGTTCATGAAGGTGCAGTGGAGGCAGGACCACATGGCAGAGGAGGAGGCAGGGGCCGAGGGGCCGCCCATGGCCCCGTAACCCTGAGAGCTGGAAGGCTGCCCGCCCACAGTACCT

Function

GO: NA

KEGG:

id description
ko03050 Proteasome
ko05169 Epstein-Barr virus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU284356 False 560 lncRNA 0.56 3 4554928 4563717
TU284357 True 2385 lncRNA 0.46 3 4556772 4563717

Neighbor

gene id symbol gene type direction distance location
LOC120551740 NA coding upstream 143155 4408832 ~ 4411773 (+)
baiap2b baiap2,LOC101465701,LOC102783223 coding upstream 247481 4195773 ~ 4307447 (+)
chmp6b chmp6,LOC103374447,LOC100705156,LOC101486168 coding upstream 371811 4171678 ~ 4183117 (+)
abca5 LOC103361128 coding upstream 394630 4118852 ~ 4160298 (+)
asb3 LOC103361130,LOC104944901 coding upstream 436157 4107220 ~ 4118771 (+)
LOC120551185 LOC104948324,LOC106922417,LOC103150698 coding downstream 92600 4656317 ~ 4670517 (+)
LOC120551365 LOC104929210,LOC103367387 coding downstream 325369 4889086 ~ 4891504 (+)
LOC120550670 NA coding downstream 353232 4916949 ~ 4919967 (+)
plaub NA coding downstream 360966 4924683 ~ 4939821 (+)
hid1b hid1 coding downstream 383253 4946970 ~ 4981418 (+)
G209719 NA non-coding upstream 82608 4472002 ~ 4472320 (+)
G209718 NA non-coding upstream 90464 4464239 ~ 4464464 (+)
G209717 NA non-coding upstream 92316 4462369 ~ 4462612 (+)
G209716 NA non-coding upstream 95501 4459222 ~ 4459427 (+)
G209715 cep131,LOC103374585,LOC102786975 non-coding upstream 99628 4454338 ~ 4455300 (+)
G209831 pde6g,LOC102781464,LOC102221623,LOC103367935 non-coding downstream 19133 4582850 ~ 4589291 (+)
G209838 NA non-coding downstream 26511 4590228 ~ 4591014 (+)
G209839 NA non-coding downstream 28274 4591991 ~ 4592277 (+)
G209847 NA non-coding downstream 65458 4629175 ~ 4629611 (+)
G209848 NA non-coding downstream 68982 4632699 ~ 4632933 (+)
LOC120551345 plekha1,LOC106957628 other upstream 526646 3998373 ~ 4028282 (+)
LOC120550571 NA other upstream 731677 3818853 ~ 3823251 (+)
G209514 NA other upstream 907931 3646009 ~ 3646997 (+)
G209344 NA other upstream 1721254 2671275 ~ 2833674 (+)
LOC120551576 lrch1,LOC106582244 other upstream 2192569 2344281 ~ 2362359 (+)
map2k6 LOC103367941,LOC105926483,LOC102221885,LOC100697345,LOC103150707 other downstream 110520 4674237 ~ 4716583 (+)
LOC120550763 LOC100696279,LOC101467831,LOC107093968 other downstream 1027618 5591335 ~ 5687896 (+)
LOC120551158 NA other downstream 1251519 5815236 ~ 6259659 (+)
kctd2 kctd2,LOC102796578,LOC107089511,LOC103371831,LOC103398851,LOC106521991 other downstream 1519385 6083102 ~ 6092738 (+)
LOC120551157 NA other downstream 1656152 6219869 ~ 6270445 (+)

Expression


Co-expression Network