LOC120551264


Basic Information

Item Value
gene id LOC120551264
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 8010665 ~ 8012176 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU285545
tatttaagGTCAGCCTTTCCCTTACCCCAGTGTGAGATCGTCTGCTTCTTTTGTGTTCAACCTTCAAGCGTTTTCCTAGTGTCCTGTTTTCTAGTTTGTTGTTTCCCTGGATTTTGACCACTGCCTGTTTTTCGGATTACCCTGTTTGCCTGCCGATTTGGACACTTTTGCTTGGTTTGGCGATTGAGACGTGTGGAGGAGATCTGTATGAGGATCTCTGTGTGTACGCCCAGCCTGAAGGAGCTGAGGCCCCATGGGAGTGAGACAGCCTCACAATAACTTGCAActtcttgattataaaagtacaaatattaacaaaaataAGAGTTCTTAGTTGAGATTAGTAATTTCCTTTAGTACAATGTTTGTTTCTAAATGTGCAACGACTTATTCTAAAACGCTTTCTACATGTGCTGTTGATTTTATGCTATTTAGTAACACTGGAGTGAATAATCAGTTGTGATTTGAAGTCCACTGAAATGTAAATGAACAATTCTACAATTCAGACTCGACAGCTGACACTTCAGCATTTTTGGTGCTTGTTTAATACAAAGTGTTGTGTATTATTTTATATGGACTTCTCTGACGTGAGAGTGTGATATATCTAAATGTTTGTGCATCAGAGCCTGAACAAGGCCCTTCTTATTCCTGTTTGATTATATTACAAATCTGTATTCCTTTTGTTAATGTAACGA
>XR_005637852.1
AAGTTATTGTTTTACGTTTGGTTCTCATTGTTGTAGATTCTTTCcatgtctggttttattttgaaggtttctGTTGGTgttcttgtttacttcctgtttgtcttttttcccTCCATTGTGATTACATGTCCCCGCCCTAATGTGctgcacctgtgtctcattgtctctcctgttttgtgtatttaagGTCAGCCTTTCCCTTACCCCAGTGTGAGATCGTCTGCTTCTTTTGTGTTCAACCTTCAAGCGTTTTCCTAGTGTCCTGTTTTCTAGTTTGTTGTTTCCCTGGATTTTGACCACTGCCTGTTTTTCGGATTACCCTGTTTGCCTGCCGATTTGGACACTTTTGCTTGGTTTGGCGATTGAGACGTGTGGAGGAGATCTGTATGAGGATCTCTGTGTGTACGCCCAGCCTGAAGGAGCTGAGGCCCCATGGGAGTGAGACAGCCTCACAATAACTTGCAActtcttgattataaaagtacaaatattaacaaaaataAGAGTTCTTAGTTGAGATTAGTAATTTCCTTTAGTACAATGTTTGTTTCTAAATGTGCAACGACTTATTCTAAAACGCTTTCTACATGTGCTGTTGATTTTATGCTATTTAGTAACACTGGAGTGAATAATCAGTTGTGATTTGAAGTCCACTGAAATGTAAATGAACAATTCTACAATTCAGACTCGACAGCTGACACTTCAGCATTTTTGGTGCTTGTTTAATACAAAGTGTTGTGTATTATTTTATATGGACTTCTCTGACGTGAGAGTGTGATATATCTAAATGTTTGTGCATCAGAGCCTGAACAAGGCCCTTCTTATTCCTGTTTGATTATATTACAAATCTGTATTCCTTTTGTTAATGTAACGAGAAGAAAAGCAATAAACAAGTTTCCATTTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285545 False 695 lncRNA 0.38 2 8010844 8012144
XR_005637852.1 True 906 lncRNA 0.38 2 8010665 8012176

Neighbor

gene id symbol gene type direction distance location
LOC120551080 LOC102778979,LOC100710248,LOC101487856 coding upstream 49160 7942284 ~ 7961505 (+)
gucy2g LOC104956250 coding upstream 87716 7909788 ~ 7922949 (+)
LOC120551809 NA coding upstream 307604 7698799 ~ 7703061 (+)
LOC120550600 NA coding upstream 313254 7692910 ~ 7697411 (+)
g6pc1a.2 g6pc coding upstream 319646 7688131 ~ 7691019 (+)
LOC120551492 NA coding downstream 5353 8017529 ~ 8018597 (+)
LOC120551506 pdzd7 coding downstream 55930 8068106 ~ 8081249 (+)
LOC120551092 NA coding downstream 70312 8082488 ~ 8085326 (+)
mrpl43 mrpl43 coding downstream 127562 8139738 ~ 8142103 (+)
mfsd13a mfsd13a coding downstream 174901 8187077 ~ 8198043 (+)
G210723 NA non-coding upstream 23119 7986036 ~ 7987546 (+)
G210722 NA non-coding upstream 26251 7984088 ~ 7984414 (+)
G210721 NA non-coding upstream 27676 7981470 ~ 7982989 (+)
G210698 NA non-coding upstream 103786 7906168 ~ 7906879 (+)
G210697 NA non-coding upstream 105158 7903232 ~ 7905507 (+)
G210762 NA non-coding downstream 50691 8062867 ~ 8063101 (+)
G210765 fam213a,LOC104950654,LOC100692098,LOC101484707 non-coding downstream 52533 8064709 ~ 8067375 (+)
G210766 NA non-coding downstream 55541 8067717 ~ 8068037 (+)
G210789 NA non-coding downstream 146660 8158836 ~ 8159039 (+)
G210790 NA non-coding downstream 158939 8171115 ~ 8179153 (+)
LOC120551082 LOC104957044,LOC103364391,LOC100710506,LOC102194388,LOC102291580 other upstream 37449 7963369 ~ 7973216 (+)
ormdl3 ormdl3,LOC102783025,LOC100707365,LOC102304808,LOC107387618,LOC106521946 other upstream 967457 7030818 ~ 7043208 (+)
psmd11b LOC103367354,LOC102209997,LOC101470828,LOC100706559,LOC101174707 other upstream 1050589 6951067 ~ 6960076 (+)
G210266 msl1 other upstream 1538510 6470656 ~ 6472155 (+)
stx4 stx4 other upstream 1618087 6378136 ~ 6392578 (+)
dydc2 LOC101484997 other downstream 45483 8057659 ~ 8062277 (+)
gngt2b NA other downstream 484437 8496613 ~ 8497654 (+)
LOC120551795 NA other downstream 1030470 9042646 ~ 9050128 (+)
rpl38 NA other downstream 1555353 9567529 ~ 9576418 (+)
LOC120551355 LOC102295310,LOC103352803,LOC102796261,LOC107102520 other downstream 1826843 9839019 ~ 9849898 (+)

Expression


Co-expression Network