G210837 (g6pc3)


Basic Information

Item Value
gene id G210837
gene name g6pc3
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 8456750 ~ 8458203 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU285696
TGGGTTGCTTGTTGACGAACAGACCTGATTCACCTATCCACCAGAAAGGCCTTTCTCCAAACAGCATCCTGGGAAATGTACATTTCATTTAAACACCAAGTTTAACCACTCCGATATAGCTGCTACCCAAAGCACCGCCACTCCAGCTCGTTTGCTGATGAAATACGTGAAAGGAAAGACGAGCAGGAAAGCTGCTTTGGGGTCTCCAATGTGAGTGATAACTAGCCACATTTTTTCTTGACTTATCGTCCTCTGCTGGAGGCTTTCAGCCATCCAGATGCCTTGGGTGTAAACGGCCTCCATGACTGCGTCCTCTCCCAATACTAAAAACGTTACTTGGATGTGGATGCAAAAATGAAACTGCAATATGATTACAGAGTAAAAGAGAATCTTTGCTTATTATTTTGTAGTTCAGGAAGTGCTGCAGCATGCAGTATGGAAGCCTATTTCCGCc

Function

symbol description
g6pc3 Predicted to enable glucose-6-phosphatase activity. Acts upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in ventral wall of dorsal aorta. Human ortholog(s) of this gene implicated in severe congenital neutropenia 4. Orthologous to human G6PC3 (glucose-6-phosphatase catalytic subunit 3).

NR:

description
PREDICTED: glucose-6-phosphatase 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285696 True 454 lncRNA 0.45 2 8456750 8458203

Neighbor

gene id symbol gene type direction distance location
tanc2b tanc2,LOC102306138,LOC101478232,LOC100708283,LOC103361447 coding upstream 4332 8296148 ~ 8452418 (+)
cntd1 cntd1 coding upstream 167679 8284095 ~ 8289071 (+)
wnk4a wnk4 coding upstream 173913 8236241 ~ 8282837 (+)
vps25 vps25 coding upstream 221284 8230586 ~ 8235466 (+)
arhgap27 LOC104956123,LOC103361454 coding upstream 227119 8201630 ~ 8229631 (+)
lsm12b lsm12,LOC107708984 coding downstream 1651 8459854 ~ 8468609 (+)
LOC120551547 NA coding downstream 11403 8469606 ~ 8473392 (+)
si:ch1073-13h15.3 LOC103381816,LOC103372025 coding downstream 41527 8499730 ~ 8506507 (+)
col1a1b LOC102789211,LOC100694532,LOC102204830 coding downstream 85332 8543535 ~ 8564587 (+)
LOC120551063 ppp1r9b,LOC100709627,LOC102205956,LOC102789794 coding downstream 118459 8576662 ~ 8596015 (+)
G210799 NA non-coding upstream 255264 8201281 ~ 8201486 (+)
G210790 NA non-coding upstream 277597 8171115 ~ 8179153 (+)
G210789 NA non-coding upstream 297711 8158836 ~ 8159039 (+)
G210766 NA non-coding upstream 388713 8067717 ~ 8068037 (+)
G210765 fam213a,LOC104950654,LOC100692098,LOC101484707 non-coding upstream 389375 8064709 ~ 8067375 (+)
G210862 NA non-coding downstream 74785 8532988 ~ 8567487 (+)
G210866 NA non-coding downstream 122802 8581005 ~ 8625108 (+)
G210938 NA non-coding downstream 215803 8674006 ~ 8674260 (+)
G210964 NA non-coding downstream 510880 8969083 ~ 8971699 (+)
G210968 NA non-coding downstream 521605 8979808 ~ 8980033 (+)
dydc2 LOC101484997 other upstream 394473 8057659 ~ 8062277 (+)
LOC120551082 LOC104957044,LOC103364391,LOC100710506,LOC102194388,LOC102291580 other upstream 483534 7963369 ~ 7973216 (+)
ormdl3 ormdl3,LOC102783025,LOC100707365,LOC102304808,LOC107387618,LOC106521946 other upstream 1413542 7030818 ~ 7043208 (+)
psmd11b LOC103367354,LOC102209997,LOC101470828,LOC100706559,LOC101174707 other upstream 1496674 6951067 ~ 6960076 (+)
G210266 msl1 other upstream 1984595 6470656 ~ 6472155 (+)
gngt2b NA other downstream 38410 8496613 ~ 8497654 (+)
LOC120551795 NA other downstream 584443 9042646 ~ 9050128 (+)
rpl38 NA other downstream 1109326 9567529 ~ 9576418 (+)
LOC120551355 LOC102295310,LOC103352803,LOC102796261,LOC107102520 other downstream 1380816 9839019 ~ 9849898 (+)
qki2 LOC104923420,LOC105926446,LOC103481625,LOC106939037,LOC106928957,LOC102292206,LOC100712570,LOC103376616,LOC106516672,LOC107090926,LOC103381788,LOC106519024 other downstream 1426167 9884370 ~ 9898509 (+)

Expression


Co-expression Network