G210964


Basic Information

Item Value
gene id G210964
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 8969083 ~ 8971699 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU285867
AGAAACATCCTTTAATGATTAAACTCAAAAGTAGCTTTGGTTATATCAAGAGCATTTGGAAGTTTAGGTGTAAACATGGCATAGACAATTGAACTCTGTTGCTTTACACAAAATAGTAGGGCAGTTGTCATTAAAGGCAATCTCTTCTAACTGAACCCAGTAATGAGCATCATGCTAAAAAACCACAGCAGACTAGCTAGTGTAAGCTCTGAATTAAACACTTTAATTCCACCACAACATAGCTCTGTTTTGGAAGGCTACAGGATGTCACCGGAGATGTCAAGTGGAGGACAGACCCTTGCTTACAGTGTTCAGAACACGTCCAAGTCCTCTTATTTCTGATGCTATGAGAGGCACCGTTGACACTGAAACACTAGCTGCATGGTTTGAATAACTGGCATCTTGCGCCAACCGCCATGCCTTTCGCCCCAGTGTGTGTAACACAAGTCACGTACAGCATTTGCAACCATGCACATGCACAAGGCAGCTTAATTgatgtaccagagtctgatgGCACACTGTAAGGTAGATTTGCTTCGCTTGACTGTACACAAGAATTTACATGCAGCATGCTGCATTTCAGTTTCTGACATCTTAGATCCATCTCATAGCATATTAACACGCAGATTCATCACCACAAATGGTTCGGAATTTGCTTTTAATGTCTATTCCCATTTACTGGCAGTTTTCCCACATGATGCTTTTGTAGCCCAGATATGTGTGTTTCAGAGTTTACAGGCAGACAGCATAACAGCCTAGAAAATGACTTGAAATTCTGCATGCATCGAGTGTTAGCGTGAATCCAGTCCCTTGTAACAGTGGAATACACAGTATAAGATAATGTGAGAGCAGTTTTATTGAGTAAGTGAGTGTTTTTAAGGCTAGATTGTCATTACCATCTGTTATGAGCAACACAGCGTTTTTATacagtagaagaaaaaaaaacttctataCGTCAGTGGGCAGAGACTGCAGCATGTCAAACTTCAAGTATGTGAAACAGACATTTGTATCATCACTGCAAACTTCTCTGTCCTTTTCCCCACATATACAATTAGTACTAAATATGTTTTTCCTGTCATCTGGTGTTTTCTTATATGGCTTCAACTCAGTGGCATTTCTTTCTCGTAATGTTAAATCGATACTTTTTTCTTAGGCTATAATGCCCCACAGTGTTATTTTCTTTATGGTATTCTACTGAATAGGCAATTCGGCTTCTTGAGACTTTAACAGCCAGGcgaacaaaaacatcagaatgaGGGACAATTAAGGCAAATAGAGCTAAAATAGAGCTTATATAAAGTAATTTCACTGTAATCCAACTCTTTACAAACTCGCAGAATAATACTGACATTCCACTTTTGATTTAATCAGTGCACCCCCCAAACTcagttatttgttttttacagtagctgatgaagaagaaaaaaaagaaaataattcagaCGTTGCAATGTGAAATAGACTGTGTTCCCTAAAGAAGCAGTCAGGCACTGTATGTACAGGTATACCTCTGTCTGATTCTTACTGTGATTAATGACAATTTGACTCTAAACAATAACAAAGTAACTCTGTTGTAAATGATTGCTATAAGTAATAGGAATGATAAATACATAGCACCAtcttttgttgaaaaaaagaaatagaaaaatactgaaaataaaaacactgaaattTGAAAATTCACAAAATAGAAAAGGACCAAATCTATAGTTCCTGGCTATGCTACATCCATGGATGTTACCACTTTTTTTGTAAAgcaaaaaaacacaacaaaatagcATCTAATTATTTCATCATTACAAACACTGAGGCACTTAATCAGCTGAAACAAAAGCTCATCTGCGTATCCATTGACAGAGCAACACAACAACTATGTACATATATGTAAAACGTGTTATAAATAGGTTTTAAACCATAGATACTATATACATCTTTTAACTGAGACAGTattggttgtttttgtgttggtttgcttgttgatttttggtattaccccccccccccgctgttAAATGGGTGTGTTGGCCTGGTGGCTCCAGAGGCCATTGGTGCTCAGGCATCAAAACTTATACTTCAGAGTGGGATTGATGACACTTGCAGTTGGGCAGGGAGTTACTGGAAACACTGGGATGGAGTGATGGCTCATTCTCGCTTCCTCAAGATGACATAGATGAGTCCGCTGATCAGCGCCAAAGGGAAAGCCACCCACGCCAGGATGTAGGAGTAGCCGAAGTTGTCTGTCCCCGGCACCCACTGCGGACTCATCACCGTATAGATGATGGCTCCGCTCATCACAAACAAACCTGCAGGGAAGAAAAAATGAGCACTGAGTAATGCTGACCATCATCTTGTTCAATTATCAGATCATGTTTCTCTGCAGTATTGTGCTCTATGTCTTGTGTCCTGAGCTGAACCTTGTCTGGCAGAGGAGGCAAGCGGGTCAGTGTTTCCCAGAAGGCATCCCACCACACTACATCAGTGTTTCATGCTTATTGATATCCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285867 True 2507 lncRNA 0.40 2 8969083 8971699

Neighbor

gene id symbol gene type direction distance location
hs3st3b1b hs3st3b1,LOC101472659,LOC100710426 coding upstream 128637 8819762 ~ 8840446 (+)
LOC120550936 LOC100695060,LOC101472949,LOC102791232,LOC102301473 coding upstream 153458 8777654 ~ 8815625 (+)
fbxw10 NA coding upstream 359419 8601846 ~ 8609664 (+)
trnag-ccc_1 NA coding upstream 367835 8601178 ~ 8601248 (+)
LOC120551063 ppp1r9b,LOC100709627,LOC102205956,LOC102789794 coding upstream 373068 8576662 ~ 8596015 (+)
ttyh2 ttyh2,LOC102794331 coding downstream 605691 9577390 ~ 9644745 (+)
kif19 kif19 coding downstream 673992 9645691 ~ 9690366 (+)
si:ch73-127m5.2 LOC104961255,LOC103352807,LOC101468102 coding downstream 719813 9691512 ~ 9696774 (+)
si:dkey-21e13.3 LOC103352816,LOC100696385,LOC108246058,LOC101467604,LOC102237836 coding downstream 725229 9696928 ~ 9703412 (+)
si:dkey-21c1.4 LOC102796569,LOC101161774 coding downstream 879024 9850723 ~ 9858242 (+)
G210938 NA non-coding upstream 294823 8674006 ~ 8674260 (+)
G210866 NA non-coding upstream 343975 8581005 ~ 8625108 (+)
G210862 NA non-coding upstream 401596 8532988 ~ 8567487 (+)
G210837 g6pc3 non-coding upstream 510880 8456750 ~ 8458203 (+)
G210799 NA non-coding upstream 767597 8201281 ~ 8201486 (+)
G210968 NA non-coding downstream 8109 8979808 ~ 8980033 (+)
G210972 NA non-coding downstream 39313 9011012 ~ 9011388 (+)
G211022 NA non-coding downstream 449753 9421452 ~ 9421689 (+)
LOC120550588 NA non-coding downstream 480900 9452599 ~ 9456949 (+)
G211030 NA non-coding downstream 524312 9496011 ~ 9497523 (+)
gngt2b NA other upstream 471429 8496613 ~ 8497654 (+)
dydc2 LOC101484997 other upstream 906806 8057659 ~ 8062277 (+)
LOC120551082 LOC104957044,LOC103364391,LOC100710506,LOC102194388,LOC102291580 other upstream 995867 7963369 ~ 7973216 (+)
ormdl3 ormdl3,LOC102783025,LOC100707365,LOC102304808,LOC107387618,LOC106521946 other upstream 1925875 7030818 ~ 7043208 (+)
psmd11b LOC103367354,LOC102209997,LOC101470828,LOC100706559,LOC101174707 other upstream 2009007 6951067 ~ 6960076 (+)
LOC120551795 NA other downstream 70947 9042646 ~ 9050128 (+)
rpl38 NA other downstream 595830 9567529 ~ 9576418 (+)
LOC120551355 LOC102295310,LOC103352803,LOC102796261,LOC107102520 other downstream 867320 9839019 ~ 9849898 (+)
qki2 LOC104923420,LOC105926446,LOC103481625,LOC106939037,LOC106928957,LOC102292206,LOC100712570,LOC103376616,LOC106516672,LOC107090926,LOC103381788,LOC106519024 other downstream 912671 9884370 ~ 9898509 (+)
G211151 NA other downstream 1081562 10053261 ~ 10062702 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000136_00261536_00270931 PMP22B, PMP22 coding CI01000136 null 260454 ~ 271519 (-)
bowfin (Amia calva) AMCG00013288 NA coding CM030125.1 CM030125.1 27130164 ~ 27140599 (+)
tiger barb (Puntius tetrazona) G33015 NA misc NC_056703.1 CM032072.1 3605186 ~ 4144396 (+)
mexican tetra (Astyanax mexicanus) G36114 NA non-coding NC_035900.1 CM008303.1 13006516 ~ 13011012 (-)