G211321


Basic Information

Item Value
gene id G211321
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 10597227 ~ 10611899 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU286374
CCTAAACACACacacacacacacacacacacacacacacacacaaacacacacaaacacacacaaacacacacacatacacacccctGTGAGTACACTCAACCTTGATGAAGTGAAAGGACAACTTGCAACCGAACAGATGGCATCACTATCAGTGCGATTACGTAACAGAATTTGGTTTCCCACATCCGTATCAATGGTTTCAGACAAACTCCAAACAATCTGCCTCAGTGTTTTAGAGGACATTACAGCCAACGACAACAACAGAGCTGCCATCAACCTGCCTTTACTCTGTCTCTATCAATCAAAAGTCTCTAAACTCAAGCCAGGATGGCCGATGGCTGCTCTTTTGTTGTCCTCTTCTGCATCTTTTTTTATAACCGACTAACACCATTCAGGGTGCGTTCACAAGGCTACGCACCATAGAAAgctttgtcctttttttcctGTCTGGTGTGGCTTCATGAACGTAGCCTCAACTTTGCTCCTGACTTATCTTATCTTGACTTTTTGACTTACTAACTACAGTCCAAGTTTACATATTGATGGATTTACAACAGAGTTGCAAAGTGGGATTAGATGCTGGGTGTAGAAGTATTTTTTTCACACTACAAAGTCTTCCTATTTCAAAGTTTTCTTATAATAGTATGCTCAAATTTTTGTCAACATAAAAAACACGAAAGATAAtataacttatgctgaacaggAACCATTCTTGCCAGCAAATGTAGTGAAAAGTCACAAGCTCAGAGACACAGTGATGTTTGTTATAAAgcaatattaaatgtattaacatTAGCTATTATAAGttactggtcataccagaccaagtaagCCTTTAGTGGCAAAACACCTGAGTGTATTAAATTGAGCAAGAATGAGTTACATTACTTATGGATGTAACTTTTAATTTGTAAGAG

Function

GO:

id name namespace
GO:0035235 ionotropic glutamate receptor signaling pathway biological_process
GO:0007215 glutamate receptor signaling pathway biological_process

KEGG:

id description
ko04724 Glutamatergic synapse
ko04728 Dopaminergic synapse
ko04713 Circadian entrainment
ko05031 Amphetamine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU286374 True 919 lncRNA 0.39 2 10597227 10611899

Neighbor

gene id symbol gene type direction distance location
myoz1b NA coding upstream 35897 10552741 ~ 10561330 (+)
synpo2lb LOC104964751 coding upstream 47616 10537342 ~ 10549611 (+)
LOC120551199 NA coding upstream 91467 10499483 ~ 10505760 (+)
LOC120551223 NA coding upstream 99239 10493142 ~ 10497988 (+)
LOC120551201 LOC102314534,LOC101476544,LOC102780776,LOC102207113,LOC100693859 coding upstream 161452 10403444 ~ 10435775 (+)
opn4b opn4,LOC103371172 coding downstream 46954 10658853 ~ 10682631 (+)
ldb3b ldb3,LOC103370407,LOC100707522,LOC108248204,LOC101168991,LOC106516631 coding downstream 75394 10687293 ~ 10700764 (+)
msh2 msh2 coding downstream 340288 10952187 ~ 10962659 (+)
LOC120550886 LOC103359664,LOC101486147,LOC102308455 coding downstream 509312 11121211 ~ 11141363 (+)
LOC120550888 LOC104941389 coding downstream 531485 11143384 ~ 11147383 (+)
G211323 NA non-coding upstream 9375 10572625 ~ 10587852 (+)
G211306 NA non-coding upstream 88903 10506326 ~ 10508324 (+)
G211256 NA non-coding upstream 352412 10243617 ~ 10244815 (+)
LOC120551816 NA non-coding upstream 380006 10217108 ~ 10217221 (+)
LOC120551818 NA non-coding upstream 380748 10216365 ~ 10216479 (+)
G211327 NA non-coding downstream 71144 10683043 ~ 10683247 (+)
G211356 NA non-coding downstream 202845 10814744 ~ 10815203 (+)
G211349 NA non-coding downstream 205370 10817269 ~ 10818275 (+)
G211370 mta3 non-coding downstream 267018 10878917 ~ 10885951 (+)
LOC120550775 NA non-coding downstream 325702 10937601 ~ 10944265 (+)
G211301 LOC108248045,LOC103381519 other upstream 65948 10449679 ~ 10531279 (+)
socs3b LOC104933891,LOC103372658,LOC104967452 other upstream 267965 10289579 ~ 10329262 (+)
G211164 rnf157 other upstream 532101 10062785 ~ 10065126 (+)
G211151 NA other upstream 534525 10053261 ~ 10062702 (+)
qki2 LOC104923420,LOC105926446,LOC103481625,LOC106939037,LOC106928957,LOC102292206,LOC100712570,LOC103376616,LOC106516672,LOC107090926,LOC103381788,LOC106519024 other upstream 698718 9884370 ~ 9898509 (+)
sncgb snca,LOC103381528,LOC104922219,LOC103370408,LOC106948771,LOC104951044,LOC106904390 other downstream 91067 10702966 ~ 10715354 (+)
G211336 NA other downstream 111634 10723533 ~ 10725559 (+)
G211354 six3,LOC104922638,LOC103370415 other downstream 189441 10801340 ~ 10803972 (+)
kcng3 LOC104951029,LOC104923031 other downstream 207159 10819058 ~ 10912098 (+)
LOC120551799 LOC104923123,LOC104951035,LOC103481543,LOC106904276 other downstream 290795 10902694 ~ 10907344 (+)

Expression


Co-expression Network