G211323


Basic Information

Item Value
gene id G211323
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 10572625 ~ 10587852 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU286377
cgcacacacacacacacacacacacacacacttacGCATGCACACAAATCTTACTTGCATGCTGCACACGTTAGGTTGCTAAACACATGCATTTTGAGCATCTTTCCACGCTGGCAtactccaaacacacacacacacacgcacacacacaggcttgtgggtgtgttgtgtgtgacttAGCCGTGGGTGTGCAAATCAAAGGTATTGTTCCTCTGTTAAGTGTTCACATTTACCTGTCAGTTTTAATTAACTGTCCCGTCACCGTCTCTCCTTTGTCAGAAACAGATGTAACATTGTTCTTATAGTCTGTTTGTAGCTTGGTCCCCACGGCAAAGGAGATAAAAGTCTCTGAATAACTGGTCGAGACACGCACCAAATGAACTTTAATGGCatgttacattttcaaatatccATTTTACAGAACCTAAAGAGATAAATGATCATTTTGAGTTCTTTTATTTTGGAAGGGATTGTGTGTGGATTTCAGTTTATCTGCAGCAGGTAAAGACGCCCGCTCTTTGTAGTAAACATAAGTTCAGAAGCTGCCTGTAGCTATCCCTCTAGAAATCACTGCAACACTTTATCTCTCTCAACAGCaaagcactcacacacacatgcctgaacatacacacacacacaaggaataggaagagagaaggaaaaggagagaggagaaagtgggagagaagaaaagagaaagatgaatgaATGTGGGAGTTGGTGGAGATTGCTCCTGTCTTCACTCTTGGACCAGTGTGtacgcgtacacacacacacacacacacacacacactcttactcACTCTGcctcatccctctctcctctcctccctccctccctctgtagGGTATATTCCCCCTCCATTCTCCTTGGCGCATTGCTGCAGTCAGCACAGCCaccgtaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaactattgCTCACACAGTCccttttccctcttctctttctctgttttacctttctttctctctctctcc

Function

GO:

id name namespace
GO:0017080 sodium channel regulator activity molecular_function
GO:0016247 channel regulator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU286377 True 1060 lncRNA 0.45 2 10572625 10587852

Neighbor

gene id symbol gene type direction distance location
myoz1b NA coding upstream 11295 10552741 ~ 10561330 (+)
synpo2lb LOC104964751 coding upstream 23014 10537342 ~ 10549611 (+)
LOC120551199 NA coding upstream 66865 10499483 ~ 10505760 (+)
LOC120551223 NA coding upstream 74637 10493142 ~ 10497988 (+)
LOC120551201 LOC102314534,LOC101476544,LOC102780776,LOC102207113,LOC100693859 coding upstream 136850 10403444 ~ 10435775 (+)
opn4b opn4,LOC103371172 coding downstream 71001 10658853 ~ 10682631 (+)
ldb3b ldb3,LOC103370407,LOC100707522,LOC108248204,LOC101168991,LOC106516631 coding downstream 99441 10687293 ~ 10700764 (+)
msh2 msh2 coding downstream 364335 10952187 ~ 10962659 (+)
LOC120550886 LOC103359664,LOC101486147,LOC102308455 coding downstream 533359 11121211 ~ 11141363 (+)
LOC120550888 LOC104941389 coding downstream 555532 11143384 ~ 11147383 (+)
G211306 NA non-coding upstream 64301 10506326 ~ 10508324 (+)
G211256 NA non-coding upstream 327810 10243617 ~ 10244815 (+)
LOC120551816 NA non-coding upstream 355404 10217108 ~ 10217221 (+)
LOC120551818 NA non-coding upstream 356146 10216365 ~ 10216479 (+)
LOC120551242 NA non-coding upstream 383652 10186917 ~ 10188973 (+)
G211321 NA non-coding downstream 9375 10597227 ~ 10611899 (+)
G211327 NA non-coding downstream 95191 10683043 ~ 10683247 (+)
G211356 NA non-coding downstream 226892 10814744 ~ 10815203 (+)
G211349 NA non-coding downstream 229417 10817269 ~ 10818275 (+)
G211370 mta3 non-coding downstream 291065 10878917 ~ 10885951 (+)
G211301 LOC108248045,LOC103381519 other upstream 41346 10449679 ~ 10531279 (+)
socs3b LOC104933891,LOC103372658,LOC104967452 other upstream 243363 10289579 ~ 10329262 (+)
G211164 rnf157 other upstream 507499 10062785 ~ 10065126 (+)
G211151 NA other upstream 509923 10053261 ~ 10062702 (+)
qki2 LOC104923420,LOC105926446,LOC103481625,LOC106939037,LOC106928957,LOC102292206,LOC100712570,LOC103376616,LOC106516672,LOC107090926,LOC103381788,LOC106519024 other upstream 674116 9884370 ~ 9898509 (+)
sncgb snca,LOC103381528,LOC104922219,LOC103370408,LOC106948771,LOC104951044,LOC106904390 other downstream 115114 10702966 ~ 10715354 (+)
G211336 NA other downstream 135681 10723533 ~ 10725559 (+)
G211354 six3,LOC104922638,LOC103370415 other downstream 213488 10801340 ~ 10803972 (+)
kcng3 LOC104951029,LOC104923031 other downstream 231206 10819058 ~ 10912098 (+)
LOC120551799 LOC104923123,LOC104951035,LOC103481543,LOC106904276 other downstream 314842 10902694 ~ 10907344 (+)

Expression


Co-expression Network