G211349


Basic Information

Item Value
gene id G211349
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 10817269 ~ 10818275 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU286421
cccccccccatcgTGATTATCATCGTCATCATCCTAATagtatcaacaacaacaacaacaaaaaacaaaacaaataaaatccaAATCATTTCCACTTCTCACACGGCAGGAGCCAATCAGAATGCAGAGGTCTTTCGGGTTGAGTTAGTCTCCACCAATGGATGTCCATCCGGGTCGACTAGAAAACCACGTAGCTGTACATGTAGAACCAAAGTCCTCATGCAGTGCCCTGCGAAGGTGGCACATCACATACGTGCACAGGTGGAAGTGGGTGAGGGGTGTTTATGGTTTTTcatggtgtgtctgtgtgtgttagagagagagagagagagagagagagagagagtgtgtgtcttttAAGAGGGGAGAAGCAAAGGTGTTAGGCAAATATCAGACCCAGgagcacaaaaaaataaaagtccagaAGAAGAGTTACATACAAAGTCTTTATCCACCATCCGTCTTCTCTTGGCCCTCCtcaaaacactcacacacaaacactctcacgcacacacaaacatacgcaCACACTATAGGTCCTTAAGTCATTGTGAAGTCAGGTGTTCTGTCAacattcaagaaaaaaaaaaaaaaaaaaaaaaaaaaacacctcaatggttaaaaaaaaaaataatcatctcTACCATCACAATGCTTCAGGTCATAAAATCTTGACATTTCTGAaaattgatttttgttttcctcCAGGTTTAAAgcagtatgcatgtgtgtagttgtagttgttgttgttgttgtcgtcttTGTCCCACtgctgcagacacacacgcggacacacacacacacacacacacacacacacaaccaacatacgcacactcactcactccaaCACACACCACATGTCCTCCTTTAGTGGAGAAAGACATGTCGCAATGGAGAGACACTCCTCCTCTGGGCAGATGCACCGATCACCAGGAGGAGACGGGGGTCTTTGCCACAGCTACCAGGGGTCTTCCAGCTCACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU286421 True 986 lncRNA 0.44 2 10817269 10818275

Neighbor

gene id symbol gene type direction distance location
ldb3b ldb3,LOC103370407,LOC100707522,LOC108248204,LOC101168991,LOC106516631 coding upstream 116505 10687293 ~ 10700764 (+)
opn4b opn4,LOC103371172 coding upstream 134638 10658853 ~ 10682631 (+)
myoz1b NA coding upstream 255939 10552741 ~ 10561330 (+)
synpo2lb LOC104964751 coding upstream 267658 10537342 ~ 10549611 (+)
LOC120551199 NA coding upstream 311509 10499483 ~ 10505760 (+)
msh2 msh2 coding downstream 133912 10952187 ~ 10962659 (+)
LOC120550886 LOC103359664,LOC101486147,LOC102308455 coding downstream 302936 11121211 ~ 11141363 (+)
LOC120550888 LOC104941389 coding downstream 325109 11143384 ~ 11147383 (+)
LOC120550580 NA coding downstream 424324 11242599 ~ 11244396 (+)
c21h10orf90 NA coding downstream 658689 11476964 ~ 11494645 (+)
G211356 NA non-coding upstream 2066 10814744 ~ 10815203 (+)
G211327 NA non-coding upstream 134022 10683043 ~ 10683247 (+)
G211321 NA non-coding upstream 205370 10597227 ~ 10611899 (+)
G211323 NA non-coding upstream 229417 10572625 ~ 10587852 (+)
G211306 NA non-coding upstream 308945 10506326 ~ 10508324 (+)
G211370 mta3 non-coding downstream 60642 10878917 ~ 10885951 (+)
LOC120550775 NA non-coding downstream 119326 10937601 ~ 10944265 (+)
LOC120550777 NA non-coding downstream 126654 10944929 ~ 10946643 (+)
G211417 NA non-coding downstream 261840 11080115 ~ 11080410 (+)
LOC120550877 NA non-coding downstream 634946 11453221 ~ 11457561 (+)
G211354 six3,LOC104922638,LOC103370415 other upstream 13297 10801340 ~ 10803972 (+)
G211336 NA other upstream 91710 10723533 ~ 10725559 (+)
sncgb snca,LOC103381528,LOC104922219,LOC103370408,LOC106948771,LOC104951044,LOC106904390 other upstream 101915 10702966 ~ 10715354 (+)
usp54b usp54,LOC102211175,LOC101471098,LOC102784247,LOC103371171,LOC103145175,LOC103381525 other upstream 195857 10564221 ~ 10621412 (+)
G211301 LOC108248045,LOC103381519 other upstream 285990 10449679 ~ 10531279 (+)
kcng3 LOC104951029,LOC104923031 other downstream 783 10819058 ~ 10912098 (+)
LOC120551799 LOC104923123,LOC104951035,LOC103481543,LOC106904276 other downstream 84419 10902694 ~ 10907344 (+)
cript cript other downstream 104148 10922423 ~ 10927226 (+)
chac2 chac2,LOC102792373 other downstream 255202 11073477 ~ 11078007 (+)
LOC120550876 fam196a other downstream 545080 11363355 ~ 11400578 (+)

Expression


Co-expression Network