LOC120551799 (LOC104923123,LOC104951035,LOC103481543,LOC106904276)


Basic Information

Item Value
gene id LOC120551799
gene name LOC104923123,LOC104951035,LOC103481543,LOC106904276
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 10902694 ~ 10907344 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU286458
GACGGTCGCAGCAGGAAGACCCTTTACCGGGTGATTTTTGTTGTGGATGACACCTTTCCCCGTCCTTTAGCAGGAAAATGTACTACAAGTTCAGCGGTTTCACCCAGAAACTGACGGGGTCTGCTCCCACGGCCGCCTACAGCCCTCAGggGCTGAGGCCAGGTGTGCCAGCAGAGTCCCCAGCCATGATCTTTGCCACACCCACCAAGGTGGTGTCAGAGGCTGGGTCCATGGTGGAGTACTTGGGAGCAAACAGGGTTCCTGACCTCCAGAGGCTTTTCCAGACGTCAGACGGTATCCCCATTCATTTGAAGCGTGGAGTCCCCGACAGGCTACTGTACCGCACCACCATGGCTCTCACCGTAGGAGGCGCTCTCTACTGTCTGGTTGCTCTTTACTTTGCAGCCCAGCCCAGAAATAAGTGACCAGCACAAAACCCAGGATCTTTCTGTAACATCTCTGACACGTCGCTACTGTAATTCATCGAACCAACGTTCCCAGCCTCCATCTGCCCTCGCCATACCACCTCTTGGGACTCTAATCACTGTCAGAACATCACACTCATTGATCACAATAATAATGTCTTGTCTTCTTTGTAAAACAAATGtctaaattaataaattttAAGGGGAAA
>XM_039789383.1
ACTTTCCCTCGACGGTCGCAGCAGGAAGACCCTTTACCGGGTGATTTTTGTTGTGGATGACACCTTTCCCCGTCCTTTAGCAGGAAAATGTACTACAAGTTCAGCGGTTTCACCCAGAAACTGACGGGGTCTGCTCCCACGGCCGCCTACAGCCCTCAGggGCTGAGGCCAGGTGTGCCAGCAGAGTCCCCAGCCATGATCTTTGCCACACCCACCAAGGTGGTGTCAGAGGCTGGGTCCATGGTGGAGTACTTGGGAGCAAACAGGGTTCCTGACCTCCAGAGGCTTTTCCAGACGTCAGACGGTATCCCCATTCATTTGAAGCGTGGAGTCCCCGACAGGCTACTGTACCGCACCACCATGGCTCTCACCGTAGGAGGCGCTCTCTACTGTCTGGTTGCTCTTTACTTTGCAGCCCAGCCCAGAAATAAGTGACCAGCACAAAACCCAGGATCTTTCTGTAACATCTCTGACACGTCGCTACTGTAATTCATCGAACCAACGTTCCCAGCCTCCATCTGCCCTCGCCATACCACCTCTTGGGACTCTAATCACTGTCAGAACATCACACTCATTGATCACAATAATAATGTCTTGTCTTCTTTGTAAAACAAATGtctaaattaataaattttAAGGGGAAACAAAAGTAAAACGTGCTCTGAAATTAA

Function

NR:

description
PREDICTED: cytochrome c oxidase subunit 7A-related protein, mitochondrial

GO: NA

KEGG:

id description
K02270 COX7A; cytochrome c oxidase subunit 7a

RNA

RNA id representative length rna type GC content exon number start site end site
TU286458 False 634 TUCP 0.51 3 10902704 10907317
XM_039789383.1 True 671 mRNA 0.50 3 10902694 10907344

Neighbor

gene id symbol gene type direction distance location
ldb3b ldb3,LOC103370407,LOC100707522,LOC108248204,LOC101168991,LOC106516631 coding upstream 201930 10687293 ~ 10700764 (+)
opn4b opn4,LOC103371172 coding upstream 220063 10658853 ~ 10682631 (+)
myoz1b NA coding upstream 341364 10552741 ~ 10561330 (+)
synpo2lb LOC104964751 coding upstream 353083 10537342 ~ 10549611 (+)
LOC120551199 NA coding upstream 396934 10499483 ~ 10505760 (+)
msh2 msh2 coding downstream 44843 10952187 ~ 10962659 (+)
LOC120550886 LOC103359664,LOC101486147,LOC102308455 coding downstream 213867 11121211 ~ 11141363 (+)
LOC120550888 LOC104941389 coding downstream 236040 11143384 ~ 11147383 (+)
LOC120550580 NA coding downstream 335255 11242599 ~ 11244396 (+)
c21h10orf90 NA coding downstream 569620 11476964 ~ 11494645 (+)
G211370 mta3 non-coding upstream 16743 10878917 ~ 10885951 (+)
G211349 NA non-coding upstream 84419 10817269 ~ 10818275 (+)
G211356 NA non-coding upstream 87491 10814744 ~ 10815203 (+)
G211327 NA non-coding upstream 219447 10683043 ~ 10683247 (+)
G211321 NA non-coding upstream 290795 10597227 ~ 10611899 (+)
LOC120550775 NA non-coding downstream 30257 10937601 ~ 10944265 (+)
LOC120550777 NA non-coding downstream 37585 10944929 ~ 10946643 (+)
G211417 NA non-coding downstream 172771 11080115 ~ 11080410 (+)
LOC120550877 NA non-coding downstream 545877 11453221 ~ 11457561 (+)
G211665 NA non-coding downstream 817797 11725141 ~ 11727426 (+)
G211354 six3,LOC104922638,LOC103370415 other upstream 98722 10801340 ~ 10803972 (+)
G211336 NA other upstream 177135 10723533 ~ 10725559 (+)
sncgb snca,LOC103381528,LOC104922219,LOC103370408,LOC106948771,LOC104951044,LOC106904390 other upstream 187340 10702966 ~ 10715354 (+)
usp54b usp54,LOC102211175,LOC101471098,LOC102784247,LOC103371171,LOC103145175,LOC103381525 other upstream 281282 10564221 ~ 10621412 (+)
G211301 LOC108248045,LOC103381519 other upstream 371415 10449679 ~ 10531279 (+)
cript cript other downstream 15079 10922423 ~ 10927226 (+)
chac2 chac2,LOC102792373 other downstream 166133 11073477 ~ 11078007 (+)
LOC120550876 fam196a other downstream 456011 11363355 ~ 11400578 (+)
G211777 NA other downstream 1180341 12087685 ~ 12088135 (+)
LOC120551485 adamts14,LOC103367006 other downstream 1643233 12550577 ~ 12599464 (+)

Expression


Co-expression Network