LOC120551603 (zmiz1,LOC102192508,LOC102310819)


Basic Information

Item Value
gene id LOC120551603
gene name zmiz1,LOC102192508,LOC102310819
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 12720835 ~ 12827609 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU287259
ctctctctctgctgatgGCTTCTCCGCGTCAAAATCCGCGACACATTTTGTCAGCAGCCACCGAGCATGGGTCCCTTTGGTAATAGAATAGCCAATGTAATTTGACACTTCAACTTACTGCGCTCTCTCCGAGTCTATTCAGTTACTCACCCACTGACGTTGAGCCCGTTCTCAGTGGCCGTGAGGGGGGGAAGATATTTAAAAACAAGAGCCGAAAATTACCGAGGACTTTCTTCGCTTAATAACCCGAAGACGTGAGGCGTGGAAGTGCTTCTACTCCTGGTGTGTGAATGGGTGGGGGGGGTCCTTCGTGGTGAAGAATCAAGGATTGAAATCAACGCAgAACGCTCCAGTTTAATGGCTGGCAGGTAGAGGCCGAAGAGGGACAATCAACATGAACTCGATTCCGTCGATGGACAGACACATACAGCAGACAAATGACCGTCTGCAGTGTATCAAACAGCACTTACAAAATCCAGCAAATTTCCAAACAGCAGCAACCGAGTTGCTGGACTGGTGTGGTGACCCCCGAGCCTTCCAGCGCCCCTTCGAGCAAAGCCTGATGGGATGCCTAACGGTGGTCAGCCGCGTAGCAGCACAGCAGGGCTACGACTTGGACCTGGGCTACCGGCTCCTGGCCGTGTGCGCTGCCAACAGGGACAAGTTCACTCCAAAATCAGCAGAAACCAACTGCTGCAGGAGGTGTCAGTCTGACTCAGGTACTTGCTGTGTGTCGCACAGGAAACTCATGCACATTGGCTGAATCCCAACCAACCATCCTCATCACAGTCCTTGCATTATGTCCTCACACTGGACTGTgtcgacatactgtacatggaaTGACATCAGATGTGCTTCTTTTGGTTGGTCATTTAGAAAAAGCTACATGGCTGCTGTTGTGATGTCTGTCGGAGTTTTACAGTATGAAGCATGTCACACATGTTGTTTCATCATCTTGCCTGTGTCACAGTTCACACTTGTGTTCCCAGATGTTCATTGAAGCCATTAACAATCTAAGTTTATGCCTTGTTCTTCTCGGTGATTTGTATGTTAATTATACCCCCcgcctacacacacaaaacagtaaGAGTTATGAACAGAGCTTACATCAGAGTCAGAATAATGTGATGAAACTTTAATGATCGCTGTAAGGAAACTGGGACAACAAGCATAAATGAGAATATAGCACATGCAACATAGTTTCAGTAGGGGCCACATATAGAAGGGCAAATCAAAATGATACAttatatgattttatttttatttgtatgtagACAAAGTACCAGCAACTTAACTTAGAC
>TU287275
TGTCTGGTAACAATCCTGGGATGAACTCTTCACAGTTTCCCGGTCCTCAGCAGCAGTTCCCAAACAAAGGCAACTCCAACCAGGGCTACATGCAGCAGGGCATGTACGGACGACCCAACTACCCCGGAGGAGGAGGCTTTGGTGGCAAGTAAGTGGACAGTGGAATTAGTACCTGTCAACGATTAAAATTGCTAAGAAGTCATTCTGAC
>XM_039789091.1
tctctctctctctctctctgtctctctctctctgctgatgGCTTCTCCGCGTCAAAATCCGCGACACATTTTGTCAGCAGCCACCGAGCATGGGTCCCTTTGGTAATAGAATAGCCAATGTAATTTGACACTTCAACTTACTGCGCTCTCTCCGAGTCTATTCAGTTACTCACCCACTGACGTTGAGCCCGTTCTCAGTGGCCGTGAGGGGGGGAAGATATTTAAAAACAAGAGCCGAAAATTACCGAGGACTTTCTTCGCTTAATAACCCGGGGCAGAAGACGTGAGGCGTGGAAGTGCTTCTACTCCTGGTGTGTGAATGGGTGGGGGGGGTCCTTCGTGGTGAAGAATCAAGGATTGAAATCAACGCAgAACGCTCCAGTTTAATGGCTGGCAGGTAGAGGCCGAAGAGGGACAATCAACATGAACTCGATTCCGTCGATGGACAGACACATACAGCAGACAAATGACCGTCTGCAGTGTATCAAACAGCACTTACAAAATCCAGCAAATTTCCAAACAGCAGCAACCGAGTTGCTGGACTGGTGTGGTGACCCCCGAGCCTTCCAGCGCCCCTTCGAGCAAAGCCTGATGGGATGCCTAACGGTGGTCAGCCGCGTAGCAGCACAGCAGGGCTACGACTTGGACCTGGGCTACCGGCTCCTGGCCGTGTGCGCTGCCAACAGGGACAAGTTCACTCCAAAATCAGCAGAAACCAACTGCTGCAGGAGGTGTCAGTCTGACTCAGGTACTTGCTGTGTGTCGCACAGGAAACTCATGCACATTGGGgacgcccctccctcctccccacagAAGAACACAAACGAGCCCCCGGGAAAAGTGCCCATGCAGCCCCCTATGAGCTCCATGAAGCCCAGCCTCTCACAcgggtcaacaacaacaatcccATACAACCCTGGGGCAACCCCCCGGGGGCCGCGGGTGTCTGGTAACAATCCTGGGATGAACTCTTCACAGTTTCCCGGTCCTCAGCAGCAGTTCCCAAACAAAGGCAACTCCAACCAGGGCTACATGCAGCAGGGCATGTACGGACGACCCAACTACCCCGGAGGAGGAGGCTTTGGTGGCAAGCATCCACAGCCAAGTTATGGCGGGCAGCAGTATGGACCAAACAGCCAGTTCCCTAACCAGCAGGGGCCGTACCCCTCACCTAACCCCTCGAGGCCACTGCCGTCCCCTAACTACCCGGGCCAGAGGATGCCAGGACAGCAGCTGCAGGGCCAATACCCGCCACCCAGTGGTGCCATGGGCCAGTACTATAAGcAAGAGCCTTTTAATGGCCAAACGAATAACTTCTCTGGGAGTGGATATCAGTACAGCCAGGGTAATATGAATGGGCCGCCCAGACCGGTGGGTAACTACCCTCACTCCCCAGTGCCAGGCAACCCCACCCCTCCAATGACCCCAGGAAGTAACATCCCTCCATACTTGTCGCCAAACCAGGACGTGAAGCCACCCTTCCCTCCTGACATCAAACCAAATATCAacgctctccctcctcctccagCCAACCACAACGAGGAGCTGCGCCTGACGTTCCCTGTGCGGGATGGTGTAGTCCTAGAGCCCTTCAGGCTAGAGCATAACCTGGCTGTTAGCAACCACGTTTTCCACTTACGGCCTTCTGTACATCAGACTCTCATGTGGAGATCGGACCTCGAGCTGCAGTTTAAGTGCTACCACCATGAAGACCGTCAGATGAACACCAACTGGCCAGCTTCGGTCCAAGTCAGCGTAAATGCCACACCGCTCACCATCGAGCGGGGCGACAATAAGACCTCCCACAAACCCCTGCACTTGAAACATGTATGCCAGCCAGGAAGAAACACGATCCAGATCACAGTCACTGCTTGTTGCTGTTCGCACTTGTTTGTGCTGCAGCTGGTCCACAGGCCCTCAGTTCGCTCTGTCCTCCAGGGCTTACTGAAGAAAAGGCTTCTGCCTGCAGAGCACTGCATCACCAAAGTTAAGAGGAACTTCAGCAGCGTAGCAGCGTCATCGGGGAACGCAGCACTCAACGGAGAGGATGGCGTTGAGCAGACGGCCATTAAGGTTTCCCTCAAATGTCCAATCACCTTTCGGCGAATACAGCTTCCAGCAAGAGGCCACGACTGCAAACATGTTCAGTGTTTTGATTTGGAATCGTATTTACAACTGAACTGTGAGCGGGGGACATGGCGATGTCCTGTATGCAATAAAACAGCGTTGTTAGAGGGACTCGAAGTGGACCAGTACATGTGGGGAATCTTGAACGCCATTCAAAATTCTGAGTTTGAGGAAGTGACTATTGACCCAACATGTAGCTGGCGGCCGGTAGCTATTAAATCTGATATCCACATCAAGGAGGATCCAGATGGACCGCTGGCCAAGAGGTTTAAGACTATGAGCCCCAGCCAAATGATCATGCCCAATGTGATGGAGATGATAGCTCAGCTCGGCCCCGGGCCGTCACCGTACCCATTATTATCTTCTCAGCAAGGGGGCAACAACAGCGAATATGGCAGCCAAGGCAACAGTTACCAGGGGCACGGGAACTTTGACTTTCCTCACGGCACCCCTGGTGGTACATCGATGAATGATTTCATGCACGGTCCCCAGCTGTCTCACCCACCTGACATGCCCAACAGTCTGATGGCCCAGGACAAGCCTCTCTCACACAACATGCCTGACTCAATACCTCACTCTGCCGGCAATGACCAGTCGCATGGTCCTCTGCAGAGCTTACATGCATCCCCACACCCTGGGAGCCAATCAGGGCAGCAGCTACACCACAGCGGGCCTCCTCAGCCGTCACGACAAGCTCCGCCTcctcagcagcaacagcagccacCCGGCCCCAACAACCATCCCCACGGCGACCTGGCCTTCAACCCCTCCAGCAGTTTGGACAGCCAAGCAGGGTCGGACATGCCTGAGCCATCTATAGACCTTCTTCCAGAGCTCGCTAACCCAGATGAGCTGTTGTCGTACTTGGATCCACCCGACCTCCCCAGCAATAGCAACGATGACCTTCTATCGCTCTTCGAAAACAACTGAGGCAattcagacacacaaaaactttTCTGACTGCCTGCAGTTTCCCTGAGAACCCAGGGCGGTCGCTCAGTACTTGATAAACACAAAGATGCACTccctttctcttcttcctcttgtaCAGTTTTCATTGGCCAGCACAGATTGACTGAAAGAGGTTAAAACTCCCAAGACACGGCGTGATGCGGAGGGGCTGGGGGGTCGCTCCGTCCTCCTACCCCAGTGGCGATACTTTTGAACTGTGCAGCTATACTCAGTtgattttgggttttttttacgCCACACACAGGTGTATGTGTGCACATTAGGAACGTCTTGTAGCATTTTTTATTCATGGTTTGTTtccttttgagaagaaaaaaggatttcactgtataaaacagaaaaaagaactGAAAAAAAACCTGCGCTATCTGGCCAGTGTGTGCTATGTCCATATTGTTATTCCAATCTGAGAGGCCACGGCTTCCTGGTGTCACAGCTCCATTCCCTGACTGGTCTGGTTAGCCACACTGTTATGTCCACCACACATCATTTAAAAGCACAAGAGATTTTGGCAATGCAAAAAGAATAATCTGTCTTAACGGAAGTATAAAAGATCAATTAGATCAGCGTATGTCTGTCGTTGacaaaaagtttgtttttttaaatattttgctcaaaattttaaaagtgtttttgGGAATGATCGGCTTCCATTTTGTCTACAATTGTGATACGTACATATTTTTGTCAAAAAGAGATATCCCTGTTTTTCAGTCCTTTGAGGGTTGAAAGCTGCAACGCAGAAGATTGTGGCCCCACTAAAAGTTTATATTGCATACCAAGAATAGCAGACCTGTACTTCTACATATGGTATAGTTATCGTCCTTCTTTGCAAGGAAGTGATTTTAATAGAAACGAAAGGTACAGTATAAGAGATTGGGGTTTCTGTAAAGATCCTGCTTTGTTTATTGCTTCCTGCTACGACTCCTTCCGTGTCGTCTGCTCTGCATGAGCCCCCGCTGTCGCTCTTGTCAGCATTTTTGCAACGTTGCATCTCTCTCCCTGTTAAATGATGTGCTGTTAAAATAGTCTACAAAGTGCATGTGTGCCAAGCCCTTGTCTAGTGCTGTTCCaagtggtaaaaaaaagatagtGTGGTTTTTCATCAGTTGCTGTTTCCACagctctttttttgtttgtacgTTTGTTTCTGTCAGATTTAGTATGATATATTTAACACTAACATTGAAGGGATAATGCTGATATCAGCAATACATTTATCATGTATTtgctgtatatactgtattatgtttgtttgttttcttgtttttgttgctgcgTAATTAAACTATCCATACATCTTTTGGGAAACTGCTCAACCTCACCAAAGTTAGAGGGATAAGAatggagaggtttgtgtttgCTTGGTCCTGTGTAAGACTGcgattgtgtgcatgtgtgaatgtgtgactgtgtgtttctATTAGTGTGATGGGAGAAAATATTGATTTCAAAGATATAGGGGAGGACAAATACAGTTTATCCATCACTGCTGTTCAAGAAGTGGTttttaaagcagtattggtgcagaccttttgccacatttgtTTTCAATTTCACTTTTTGAGAAGAGTGTTGTCCAGTatgcaaatgtattattttttaagaaaTGCTATTGTACTGTAAATATCATTGTGAATATTTTTGTATCATCTTGATAATGTCCTTTGATCATTAGTCGTCCGACCTAACAACGTATGCTCCCAGACTTCCATCTAACCACTGACTTTGTTTGTAACCAGCATATGACAGCTGTCTCGCCTCCTCGTTGTGGGGAAGCCAGTCCAAATGTCTCATAAGCTATTTTCTGCAGGTCGCCGTGCTTTCTAGTCACTTTCCTCCCAGTGCATTCTGTCTCACACCTGTCGTTTGTTGACAGATGTCCCATTTTTTAtgtgcccccccccctttcctgcATCAGCTCAAGGTGATTGTGTAGCATCATTTCAGTTTTCAGATGTCAAACTCAGTTGGACGCAATATTTTCTTTCACACTCAGATGTATTTGATTGAAAATGTCTATTCATGAATTTACGTTTGCATTTTATCAGTGATACTGAACAGTAATGGTTTTAAAAAAGATATGGTATTGGCTGGCTTTCAGTGTAATTTCAGTGAGCTATGTGAATATCATAATTGTTGCTAATTGTCAATACACAGTGGTATTTTAAAGATATATCACAACCATATTTTAAAGAAATCCAtgatattgtttatatttttgttatagAAAATGTGGCTTTTTTAAAAGCGCGAGACCATATACATTTTTATCCCCTTTATGTTTTTGGTAAATTATTTTGTACTGGTTTTCTTATTAATCTGTAAGGCTAGAAATCCAATTTCCTTCAACTGTAGCATTGTGCTGATTTAACCACCCTGGTTTTAtgtaaacattattttaaacgTCATTTAAGAAATATTTGTTCCAGTTCAGCACGCTGACATGTTGTTTCATATTTATGTCACAAAGAGACATCAAATCAAATAATCCCTATTTTAACGATACACCgccacattttcatttttttacaaTCTGAATTGAAACTTTTGATCAATCCCATGGAAGTCTTCgtcatttcatatttttttcctcaCTTTCAAGTGAGCCAATTTGGTGTATAAGGCAGCACCCCAAATCTGTAGTTGCACAATCACAATAAATGGCCATTTCTCTGGAGgaagttgttttaaaaaaaaaaaaaaagaaaagaaataaaaaatgcagaGAGAAAGGGCACGTTCATCATTCTGGCCTGGAAAGGATGTTGAGGGCAAGGCTAGATCAAACGTCCCAAGGATGCCTGTATATATGTAAATGAATATAGAGACATGTGAACAGAAATGTATTCATTTTCCCTGGGAATGTGCATTGTTTCTTCAGAATAATAAAAAGCTTGCAACCCCTCTACTGGAAGTGGCTGAATATGGAAAATTAAACTTGTTAGTTAGTGTCTGTGGGTATCTCTCAGCATTTTGTTCCCCCTCTGTAATATATTTCACCTCTTTTGTTAGGGGAACTGGGACAACTATGTTTTACATGTAATATTTAGCCTAAGTGTTCTAGTCTGTCATCTGCATTCTCTGAGTTGCgaaagctataaaaaaaataataataaaaaggttACAAAGAAAATCGTTCGGAGGGGTGGGAGGAAGGCGGTGGGAGGGACAGGTCCAGAAGATTGTAACCAAATCCATAGTTTGTACAATTTTTTGATATCATGAGCAGTTGGAAAAATGATACAATCTAAGGTGATTCATGCAATGTGGCCATTGTCTCTATTGTGTACATTGTATGTACAATCATTTCATATTCTAAACTGGTCAGAAAATAAAGGAACTAATTGTGATTTTTAGTCTTGCAGAACTGTATGTAGTTAGATGATGTGACAACCTAATATTTATCTAATAAATATGTATTCAGATGATCCCTGTA

Function

symbol description
zmiz1 Enables SMAD binding activity and transcription coactivator activity. Involved in several processes, including androgen receptor signaling pathway; pyramidal neuron migration to cerebral cortex; and transmembrane receptor protein serine/threonine kinase signaling pathway. Located in cytosol and nucleoplasm.

NR:

description
PREDICTED: zinc finger MIZ domain-containing protein 1 isoform X2

GO: NA

KEGG:

id description
K22403 ZMIZ; zinc finger MIZ domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU287259 False 1301 TUCP 0.47 6 12720858 12809117
TU287275 False 209 lncRNA 0.50 1 12818505 12818713
XM_039789091.1 True 6538 mRNA 0.45 21 12720835 12827609

Neighbor

gene id symbol gene type direction distance location
LOC120550644 qrfpr,LOC100702434,LOC102786759 coding upstream 75225 12635197 ~ 12645610 (+)
trnal-aag_11 NA coding upstream 109933 12610821 ~ 12610902 (+)
pald1a pald1 coding upstream 183026 12490620 ~ 12537809 (+)
LOC120550721 spock2 coding upstream 254257 12424240 ~ 12466578 (+)
ascc1 ascc1 coding upstream 300497 12407605 ~ 12420338 (+)
LOC120550911 ppif,LOC107089276,LOC102312480,LOC103142309,LOC101486912,LOC100699547,LOC106930515,LOC105928234 coding downstream 523 12828132 ~ 12837177 (+)
anxa11b LOC101063934,LOC103369864 coding downstream 25152 12852761 ~ 12861673 (+)
LOC120550820 NA coding downstream 37873 12865482 ~ 12901565 (+)
LOC120550674 LOC102213110,LOC102789302,LOC102314531,LOC106919544,LOC106949528,LOC106517014 coding downstream 74706 12902315 ~ 12999006 (+)
LOC120550677 znf503,LOC100700352,LOC102790377 coding downstream 299920 13127529 ~ 13130326 (+)
G211919 NA non-coding upstream 96140 12617355 ~ 12624695 (+)
G211864 ddit4,LOC103362467 non-coding upstream 282182 12399904 ~ 12438653 (+)
G211791 NA non-coding upstream 556381 12163345 ~ 12164454 (+)
G211785 cdhr1,LOC102779453,LOC101475681 non-coding upstream 561582 12120008 ~ 12159253 (+)
G211786 rgr,LOC103376249 non-coding upstream 597900 12119076 ~ 12122935 (+)
G212043 vdac2,LOC104943447,LOC101464912,LOC100700892 non-coding downstream 340549 13168158 ~ 13169851 (+)
G212065 NA non-coding downstream 369892 13197501 ~ 13197930 (+)
G212086 vcl,LOC106959441,LOC103142331,LOC102228164,LOC102207794 non-coding downstream 505725 13333334 ~ 13335524 (+)
G212092 vcl non-coding downstream 516109 13343718 ~ 13347321 (+)
LOC120551193 NA non-coding downstream 517162 13344771 ~ 13349545 (+)
LOC120551485 adamts14,LOC103367006 other upstream 121371 12550577 ~ 12599464 (+)
G211777 NA other upstream 632700 12087685 ~ 12088135 (+)
LOC120550876 fam196a other upstream 1320257 11363355 ~ 11400578 (+)
chac2 chac2,LOC102792373 other upstream 1642828 11073477 ~ 11078007 (+)
cript cript other upstream 1793609 10922423 ~ 10927226 (+)
LOC120550681 comtd1 other downstream 332367 13159976 ~ 13166392 (+)
zgc:153981 LOC104943448,LOC101465490,LOC103355374,LOC100701713,LOC104930939 other downstream 353386 13180995 ~ 13184797 (+)
G212108 NA other downstream 552607 13380216 ~ 13380934 (+)
G212254 NA other downstream 1173191 14000800 ~ 14032589 (+)
atrnl1b atrnl1 other downstream 1880297 14707906 ~ 14770629 (+)

Expression


Co-expression Network