LOC120550601 (adam12,LOC104959042)


Basic Information

Item Value
gene id LOC120550601
gene name adam12,LOC104959042
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 11496582 ~ 11569280 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787204.1
gggggtctccTGCACATCAGCTGTTGCTGGATTGTATGATGGTTGCGCTGCAGTGAAACAGTTGGCCAGTCCCGTCCACGCTTCAGCCGGGCATCATGAACCTCGGGAGCCGGAGTCTGAAGTTTGTTATTTTGACAGCACTTCAGGCTTTATCAGTCTCTATCTCGGTTCGTGACAGTGTGCTCTCCAGATCTGTTGAAGGTAAGAGGCGAAGAAGAGgaaATGTTTTGAGCACGACTGTTCAACACAGACCAACAGCAAAGCAGAAACACTATGGGACTACAGTTCCTCTTCAGCTTGTTGGACAAGACTGGAAACCGATCAGCCAGCTCAAATCCCAGCGTCACCCTACATCACTAAAGCTCCTGATAGAAGTGGAAGGTGAGCAGCTGCTCTTGGCTCTGGAGAAAAACGAGGGGCTGTTTGCAAGTAACTATACGGAAACCCATTACCTGGAAGATGGCATTGCGGTCACAGGCTCTCACGACTTCACGGCAAACTGCTACTACCACGGTGAGGTGGAGGGTCATGCCAACTCGGACGTCAGCCTCAGTACCTGTGCTGGTATTAAAGGTTTCATAACTCTTGAAGGCAAATCCTATGTACTGGAACCATCTGCTGATCACTCTGATGGGACTCACTGGATCTACACAGCTGAACACCTCAATTTTGCACCTGGCACCTGTGGCCATGAATTTAACATATCCTACCCCATTGAACATGCAGACAGCAGTCCGTTCAAGGCTTTCGGCACAAGGCATAAACGCCACGTCCAGACTACGACCAAGTATGTGGAGCTGATCATTGTGGCCGACAACAGAGAGTTTCAGAAGCAAGGCAAGGACATGGAGAAGGTCAAGCAGCGACTGGCTGAGATCGCCAATTACGTGGACAAGTTCTACAGGGCTCTGAATATCCGTGTGGCCCTGGTGGGCCTGGAGGTGTGGAGTGATGTGGACAAGTGCCCCATCACCCAGGACCCGTTCACCACCTTGCACGAGTTCCTAGACTGGAGGAAAGTCAAGCTGCTGCCTCAGAAGCCTCATGACAACGCCCAGCTAATCAGTGGGGTTTATTTCCAGGGCACCACCATTGGTATGGCACCCATCATGAGTATGTGCACAGCAGAGCAGTCGGGAGGAATCGTCATGGACCATTCGGACAACCCCCTTGGCGCTGCAGTCACTCTGGCCCACGAGCTCGGACACAATTTTGGAATGAACCATGACACCCCAGAGAGGGGGTGTGGCTGCAGGGTGACCGTGGATCGTGGAGGCTGCATCATGACTCCCTCCACCGGGTACCCGTTCCCCACAGTGTTCAGCAGCTGCAGCAAGAAGGACCTGACGGCCAGTTTTGAAAAGGGCGTTGGGATGTGTCTGTTCAACATGCCTGAGGTCAAGGTTCTCTACGGTGGGCAAAAATGTGGCAACGGCTAcgtggaggagggagaggagtgtGACTGTGGAGAACTTGAGGAATGTGTGAATCCGTGCTGCAATGCTACTACCTGCACTCTGAAGGGGGATGCTGTTTGTGCACATGGACAGTGCTGCCAGGACTGTCAGCTGAAGCCAGCAGGCACTCCATGCCGTGAATCAGGTAACTCTTGTGATCTGCCTGAGTTCTGCACCGGCGGCAGCCCTCACTGCCCCTCCAACGTCTACCTGCACGACGGCCACGCCTGCCAAAACGTGGACGGCTACTGTTATAACGGCATCTGCCAGACTCACGAGCAGCAATGCATCACACTGTGGGGCCAAGGAGCAAAGGCAGCTCCAGGCATCTGCTTTCAAAGGGTCAACTCAGCAGGAGACCCCTATGGCAACTGTGGCAAAGACTCCAAAGGCTCCTTTGCCAAATGTGAAGCACGAGATGCTAAATGTGGCAAAATCCAGTGTCAAGGAGGAGCTAACCGCCCAGTAATTGGTACCAACGCTGTTTCCATAGAAACAAACATTCCCATGCAGGAAGGGGGAAGGATACTGTGCCGAGGCACACATGTCTATTTGGGTGATGACATGCCTGACCCTGGCCTGGTCCTAACGGGGACCAAGTGTGGAGATGGACTGATGTGTCTGAATCGTCGGTGCCAGAATGTCAGTGTCTTTGGTGTGCATGAGTGCTCAGCCAAGTGCAGCAGTCAAGGGGtgtgcaacaacaacaagaactGTCACTGTGAGGCTCATTGGGCGCCTCCCTTCTGTGACAAGGCAGGTTTTGGAGGGAGTGTGGACAGTGGTCCCATCAGATTAGCAAACAGTGGGACTCTGACAGTGGGCATCCTGGTGGCTCTCCTTACTgtcctgggagctgctctgatCATCTGCATCAAGAGAAAAACAGTGCTGGGTCTGCTCTTCATAAGTAAAAAGAACCCAATTGAGAAGCGcagATCAGTAAACGCCGCAATCAGCGGACCATCCACTCCGAACCAGCCTCGGTCATTAAGCACGACGTCTCCATCTCGACCGGCCCCGCCTCTGCCACACAGTGCCACCATCTTCAAGCCTCCTCACCGTGGACCAGAGGCGGTGCTACCACCAGCCCCATACCCCTCCCACAGCCTACACAGACTGCCCCAGTGCCCTCCGGTTCACCTCAGCCACCCTGTCCCTCTGTCTTTCACCCTGTCCCTCTCCCCTGGCCCCGGGCTGCCGAGACCCCCGCTGCCTCCTCCTCACATCCATGTCGTACCAAGAGGGGCGTCGTTTCGCAGTGCGTCACGCCATAACTCTTGCAGGATGGTCATGGAGTTGGAGAAGCCCAGTCCTCCTCAGAAACCCCTTCCTGCCGATCCAAGGAGCTCTCGTCTGGTTCGAAGTCCCTCTGTAGTCCAGGGGCCTTCTGCTGTTTGCGGCCCTGCACCATTACCTGGCGTATCCAGACCTGTGCGCCCCGTACCACACCCCAACAGACCCAGTCCCAAGCAACCTCCAACGCTACCAAAGCCTTGCATAATCGCCAACGTGAAATACAGCAGCTGAGACTTTGGCCAGATGGGACAATGTTGTGATAATACACTAAAGAATTTGCACTATAAAAACTCTGAAAACCTTAAAAAGAAGGCGGCTTCTCTGAGTTTTGTATCAGGAGATCTTGCCGTGTCCCTTTGGTGCTCTGTCCCTAAATGGTGCTACGAGTCTGAGCTCAGGTACATGTAAAGTATTTATATTCTGTATTTATTGCCACGCAGTGCACTGTGCCAGACACTTTTACTACACGGTAGCAACTTAGAAGTTTAAATTTGTCCTTTGCATCAGTTTCACAATGTGTTCTTTCTCATCAACTGGTCTTTATCAAGGACAGTGAAGggagattaaaaaaatgaagaaaaaataaagccAATCTGTGACATTCTAATGGCAGACATGTTTTATTAATTGTGTTTTAAAGAAGGGAACCCTTTACATAATGGTTTTGTTTGTATACTACAGGGAGAGTTGAAAAAGAGTATTGTGCAATGACAGATGAGAACAGACAACACTTTTTCTTGAATGGTAATGCTCTCTGTAGCACCTTTGAGCCAATCTGATGAGGCTTGAAACAactacagaaaaagaaaaagtggtaTTACTGCAACAGTTCTGCAATTGGGGAAGAGGAGCTGTTTTTTTCACAGACCGCTGAAATTCAGGTCTGTTTCCTTTGCGTTTATATTTCGGACAGGTGACAAGTCAATTTGTGAAATGTCACTGATTTGccatttctttttcattaaCAAGACTCAATAGGCTCACTTGAGGGATCTGGGTACTGAGGTATGAACTGAACATGGATCTAAAATGAGCTGAGAGCAAGGAAGCATTCATTCGTCAGAGAGAGTAAGACGTCTGAAATAGCGCTCTGCTAAAGGtcgcgtgtgtgtttttgagtatTTCCCTGTGTGCCTGTCTACACCGAGGACTCTGTGTGAAACTCGGTGATGAAATCACGGAATCACTAAGGACTTTCTTAAAGCTGTGTCCACACAGGCGTCATGGAGGCACTCACATGTAAACAGCCAGTGTCTGGTTACACGTGTGGATTTTTAACAATTTCTTTCTGTCACTTGACAAGGACAGATTTCTAGATCTCTTTCTGCCACTGAAATGAAGTTTCAACCAAAACGTTGTGGCAGTTACTCATTTTCTatattttgtaaattttttatTTGGCTGTTGAGatggttttttttaaagccagtaTACATGCCAGATACACACGCCTACATTAATTGTATTTGTGGCAATTATTGAacagtgttttattatttttgcagAATTATTGTTTTACTGGATTGCAATGCAGCGTATATACATTCACACTGAGCAACTTTTCCTTTAAGCACAGCTCTTGTTCACAAATATGTAGGCTGAAAACTAACTTTGGACTTTTGTTACTTTTGATAATGTTATCTTTTTAATAATGCAGTAGTTTTACATTCAGTGCTTTGTTTACTTTGCTTTTTCAATGCTATGCTATATGTCCACTATAATAGACAGTATTTGAGTCCTGTCACCGGACTGTAAGTTATGTCCATATGTTCCTCGTATGTTGTGTTACAGGTGAACACATTTCCAtggagaatgttttttttatataatgattGTTTGATACATCATATGTAAAGAAAACAGTGTCTGTGTCTGGTCATGGTATTTTTAACACCTGTGCAGTATTAGTAAAACAGTTTTTCAAATA

Function

symbol description
adam12 Enables SH3 domain binding activity. Involved in positive regulation of angiogenesis. Located in nucleoplasm and plasma membrane. Implicated in osteoarthritis.

NR:

description
PREDICTED: disintegrin and metalloproteinase domain-containing protein 12-like

GO: NA

KEGG:

id description
K06835 ADAM12; disintegrin and metalloproteinase domain-containing protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787204.1 True 4683 mRNA 0.48 23 11496582 11569280

Neighbor

gene id symbol gene type direction distance location
c21h10orf90 NA coding upstream 1937 11476964 ~ 11494645 (+)
LOC120550580 NA coding upstream 252186 11242599 ~ 11244396 (+)
LOC120550888 LOC104941389 coding upstream 349199 11143384 ~ 11147383 (+)
LOC120550886 LOC103359664,LOC101486147,LOC102308455 coding upstream 355219 11121211 ~ 11141363 (+)
msh2 msh2 coding upstream 533923 10952187 ~ 10962659 (+)
dhx32a dhx32 coding downstream 1437 11570717 ~ 11577632 (+)
uros uros coding downstream 9925 11579205 ~ 11583114 (+)
mmp21 mmp21 coding downstream 13909 11583189 ~ 11587630 (+)
ctbp2l ctbp2,LOC104925227,LOC100698659,LOC105926449,LOC107387783,LOC102290675,LOC103381637,LOC103150461,LOC101467118,LOC102209184,LOC102797539,LOC103481571 coding downstream 51361 11620641 ~ 11718443 (+)
hpdl hpdl coding downstream 167697 11736977 ~ 11739509 (+)
LOC120550877 NA non-coding upstream 39021 11453221 ~ 11457561 (+)
G211417 NA non-coding upstream 416172 11080115 ~ 11080410 (+)
LOC120550777 NA non-coding upstream 549939 10944929 ~ 10946643 (+)
LOC120550775 NA non-coding upstream 552317 10937601 ~ 10944265 (+)
G211370 mta3 non-coding upstream 610631 10878917 ~ 10885951 (+)
G211665 NA non-coding downstream 155861 11725141 ~ 11727426 (+)
G211666 zranb1,LOC104942016 non-coding downstream 164347 11733627 ~ 11735251 (+)
G211706 NA non-coding downstream 252524 11821804 ~ 11822046 (+)
G211710 NA non-coding downstream 269721 11839001 ~ 11839311 (+)
G211711 NA non-coding downstream 270264 11839544 ~ 11839743 (+)
LOC120550876 fam196a other upstream 96004 11363355 ~ 11400578 (+)
chac2 chac2,LOC102792373 other upstream 418575 11073477 ~ 11078007 (+)
cript cript other upstream 569356 10922423 ~ 10927226 (+)
kcng3 LOC104951029,LOC104923031 other upstream 584484 10819058 ~ 10912098 (+)
G211777 NA other downstream 518405 12087685 ~ 12088135 (+)
LOC120551485 adamts14,LOC103367006 other downstream 981297 12550577 ~ 12599464 (+)
LOC120551603 zmiz1,LOC102192508,LOC102310819 other downstream 1151555 12720835 ~ 12827609 (+)
LOC120550681 comtd1 other downstream 1590696 13159976 ~ 13166392 (+)
zgc:153981 LOC104943448,LOC101465490,LOC103355374,LOC100701713,LOC104930939 other downstream 1611715 13180995 ~ 13184797 (+)

Expression


Co-expression Network