LOC120551063 (ppp1r9b,LOC100709627,LOC102205956,LOC102789794)


Basic Information

Item Value
gene id LOC120551063
gene name ppp1r9b,LOC100709627,LOC102205956,LOC102789794
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 8576662 ~ 8596015 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788206.1
TGAGGTTAAGGTTTGCATTGTTGTAACGGCAAGCCAGCTAATGACAGATGCATCGTGCTCACTTTCTCCGTTGCATTGGACGAGAATTGCAGCGGATGCAAGCAGGCCTTTAATACgatctgttgtttttgtttctcccCATCTGCCGGTCTAGTCTGGGCGCCACCTCGCTTGGATCGGCTGCTGGTGGATGAGACAGATTTGCCACCGGGGGTTGAGAAAGGAGACATGCCGTCGCTGAGCATCCGTTGCGACGCTTGACTGACCATGATGAAGACCGAATCCACATCCAAGAGCACCGGCTCTGGCTCTACGCTCAGGAGCCCATCCCCGCACAGAAACGCGTACGAAGCGGGGATGCAGGCCCTGAAGCCCGTCAAAGACAATGCTGCGAACGGGGACATGCAGGAAGGCCCCCGAGGGCGCAGGTACGGCTCCAACGTGCACCGTATCAAAAACATGTTCCAGCAGATGCAGACCCTAACCCCCGCCGATGCGGAGTGTGAGGAAGGCGCCAGGAACGCCGACAAATCGGTGCGCCTCTCCCTCCCCAGAGCCGGGAGCCTGAACGAGAACGTGGACCACAGCGCGCTGCTGAAGCTGGGGTCCACCGTGTCCGAGCGCGTTAGCAAGTTCGATATCAGTAAACCAGAGAACGGGCATCCGCGGGCCTCGTCACCCAGCTACTCCAAGCTGCAGGAGACCCGCCGCATCTTcgagcagcagcaggagaggcAACAGCAGGAGAGGCAGCAGCAggagaggcagcagcagcaggaaaaGTTGGCCACCACCAGGGTCCTGCTGAAGACAGACAAGGCCTCGGGCTTCCAGGATAGCAGGTTGGACGTGGTGTCCCGGTTCAACGGCAGCACCGAGTCTCTGGACAGCCTGGACACCAGCGATGCGGTGTCCCCAACAGTCAGCCAGCTCAGTGCTGTGTTTGAACGGGCAGCCGAGCTCCGGAACAACCTCCACCGCCTCTCCTCTACCCCACCGCTCCCTTCCCGGGGTGTAAGCGCCAAGGTGGGTGTGCTGAACTccaaaataattacaaaaagGGTTTGTGCCTTTGCAGCAGGCAACCCGGAGGAAGATATAAACAATCAAATGGGCCAAGAGGGGCCTCCAAGTGGCCCCAGGGGGAGGGCTACTCCTCCATCTGAAAGCATTAATGGGTGCCAAAGCGCCCTGAATACTGAACTTTACAGTACTTTAGGAGAGCCAAATGagcagagagaaaagacagTGTCAGATGCAGGCGTTGAGGTCAAATCTGAGGAACACTATGGGGCCAAGGGGCCTAACAGCACAACACTGCAAGGTGACATCCACATCTCTGTAGAGAATGGAGGAAGCGAGAAGGAAAGCTCCCCAAAGGGTGGTGAGATGGCCAAGGTTGCTGGGGAAGAGGAAGACAGGACTCTCAGAGACGACCAGTCGGGGCGTGACTCTGTGGATATCAGTACCTACAGCGCGGTGGGGGAGGACTTTGGAGGAAGCCAGgtggatgaggaggaagatgagggtGACGACCGCTACGAGCCCGAGTCCAGCTGTGCAGAAATTTCTGGGCTGCCTGTGGAGGAGGACCCGCCCCCCTCCAGGAAGATCCGCTTCAGCACAGAGCCCATCAAGGTGTTTGCCACTTACCCCAACGAGGACTACGACAGGCGTAATGAAGACGTGGATCCAATGGCAGCGTCTGCTGAGTACGAGCTGGAGAAGAGGGTGGAGAGGCTGGACCTGTTCCCCGCGGAGCTGGAGAAAGATGGCGAGGGCCTGGGCATCAGTATCATCGGGATGGGTGCAGGGGCTGACATGGGCCTGGAGAAACTGGGCATCTTTGTGAAGACAGTCACGGATGGTGGAGCAGCACACAGGGATGGCAGGATCCAGGTGAACGATCTGATTGTGGAGGTGGACGGGACCAGTTTGGTGGGAGTCACCCAGAACTTTGCCGCCTCGGTACTCAGGAACACCTCAGGAACTGTCAAGTTTGTGATTGGGCGAGAAAAGCCGGGAGAACAGAGCGAAGTGGCCCAGCTCATCCAGCAGACCCTGGAGCAAGAACGCTGGCAGAGGGAGATGATGGAGCAGCGCTACAACCAGTACATGGACGAACAAGAGGGTGGCGAATACGGCACAGACGAGGAAGAGGACGAGGACGAGGAGGTCAGTCCGCCGTATCCCAGTGCCATCGAGGTGTTTGACTTGGCCGAGAACGAGGACATGTCGCCTCTGGAGACGGACCCCGAGAAACTGGCACATAAATACAAAGAGCTCCAAATAAAGCATGCTGTGACTCAGGCTGAGATCCAACAGCTGAAAAGAAAGCTGCACCACGCCGAGCAGGAGAAGCAGCGCTGGCGCATGGATAAGGCCCAGCTGGAACAGACCCTGCAGGAAAACAAGGAGCGTATGGAGAAGCTAGAGGGTTACTGGATGGAGGCTCAGAGCCTGTGCCAGGCAGTGGACGAGCACCTGAAGGAGACACAGTCCCAGTATCAGGCCCTGGAGCGCAAGTACAGCAAAGCCAAACGCCTGATCAAGGAGTATCAGCAGAAGGAGATTGAGTACCTGAAGAAGGAGACTCAGCGTTGTGCACAAGTTGGAGCTGAGGCCTCTCTTCTCAAAGAGGAGTCAGGACAACTTCAAGAGCAGGTGGCTGACCTGGAGTGCAGAGTGGAAGAGCTGAAATCTGAACCTTTATAAAAGCCTTTTGCCCGTTAGGTATATCTCAGAAAGCATAACTTCACTCGATGGAGACGATAAGTGTTATTGTACTTCCAATGACCTGCAGGGTATTTCTCGTCACCACCTTGAGCTTGGTTTCCGgttgcatactgtatatgtgtccTCAGGCTTAGTATTTCAGCCACTTAACCCTTTTAACCATGTTTTTCCGTTATGGGTACACAAAGAACGGTTTTATCATCACAAATATAGACTCTGTTGAGCTCTAGATCTATTGctccattttcattttcagtatATAATCTTAATTTGTGGTTTTGTGACAGATCGAGCTGTTGCTTTTAATtgccaaaacacaaaacaaattcctttctTTTGCCTAGTTTTGTGACCTTCTTTTCTGTTTGTACAGATGTGTTACTGTGTGGTTAAACAATCAAGTTTGGTTTGTAAAAAATTTTAATATGTGTATAACATTAACATAATATAAACTAATGAGATTGAGGGTTGTTGtatattttatgtgatgaaGATGTGTACATTGGATGGAGATTGCACTGAAGAAGACATCAACAAGGTGCTTCACTGGAACGGAGGAATAAATGGGAACAATGTTTGAGGTGTCTTTGAAATTGTACAAACAGTAACCCAACCTTCATAGGGGTCCTATCACTATACCTTGAGAACCACCTGCTGCCTACCTTTCAGAAGggtttgtgtattttttacacattaagacTCAAATGAGCGTCCAATCCTCTGGTTTCAACCctactttcaaaaaaaaaaaaaaaaaaaaaagaaaaaggaccaCAGAAACAAGCCTCCACAACTGCTGTGCCACAAATGAAAATGGATCTCTTTCTCCCCTCAAAATGGATGTTGTTAAGGACTTTGTGTAACTGGTATTAGTTAGGACTACTGATATAAGAAACATTACTGGACTGGGATGTTAAATAAGCCGTTACCAGCAGCAAAAGTTATAGATTTAAAAAGCTTGTGTCTCGAACCAGCAGATGCACTTGACACTACTGTGTGTAGCACATGGAAAACACTGCCAGGTTTATACCTGTTTCAATTTACGCACagtttgaaatgaaatgagTCTACTTGTGTCAACTGTCATACCAGTATGTTTGTATAGTTCAGGTaagactgaaatattttaattttacttaatatttataatatagtCAAGGTGGAAATATGAGCTAACAAGGACAAAAACTGACAAACGCAATGCAAAAAGCAATGTTCAATGGACAGTCATACTGTGTTATTAGAAAAAAGTAGATCATGATGACTACGAAAACAAAATTAAGATTAATGAATTGAAAAAAACAGGCATGTTATGAGTATTTTCATAATATTAAGGCGTGTACAGTGCACATGCTTtgcattgtatgttttgtggaATAAATGGTCAACAGTGA

Function

symbol description
ppp1r9b Predicted to enable actin filament binding activity. Involved in cell migration; filopodium assembly; and negative regulation of cell growth. Located in several cellular components, including filopodium; lamellipodium; and ruffle membrane. Biomarker of Alzheimer's disease; hepatocellular carcinoma; and schizophrenia.

NR:

description
PREDICTED: neurabin-2

GO: NA

KEGG:

id description
K17551 PPP1R9; neurabin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788206.1 True 4130 mRNA 0.50 10 8576662 8596015

Neighbor

gene id symbol gene type direction distance location
col1a1b LOC102789211,LOC100694532,LOC102204830 coding upstream 12075 8543535 ~ 8564587 (+)
si:ch1073-13h15.3 LOC103381816,LOC103372025 coding upstream 70155 8499730 ~ 8506507 (+)
LOC120551547 NA coding upstream 103270 8469606 ~ 8473392 (+)
lsm12b lsm12,LOC107708984 coding upstream 108053 8459854 ~ 8468609 (+)
tanc2b tanc2,LOC102306138,LOC101478232,LOC100708283,LOC103361447 coding upstream 124244 8296148 ~ 8452418 (+)
trnag-ccc_1 NA coding downstream 5163 8601178 ~ 8601248 (+)
fbxw10 NA coding downstream 5831 8601846 ~ 8609664 (+)
LOC120550936 LOC100695060,LOC101472949,LOC102791232,LOC102301473 coding downstream 181639 8777654 ~ 8815625 (+)
hs3st3b1b hs3st3b1,LOC101472659,LOC100710426 coding downstream 223747 8819762 ~ 8840446 (+)
ttyh2 ttyh2,LOC102794331 coding downstream 981375 9577390 ~ 9644745 (+)
G210862 NA non-coding upstream 9175 8532988 ~ 8567487 (+)
G210837 g6pc3 non-coding upstream 118459 8456750 ~ 8458203 (+)
G210799 NA non-coding upstream 375176 8201281 ~ 8201486 (+)
G210790 NA non-coding upstream 397509 8171115 ~ 8179153 (+)
G210789 NA non-coding upstream 417623 8158836 ~ 8159039 (+)
G210938 NA non-coding downstream 77991 8674006 ~ 8674260 (+)
G210964 NA non-coding downstream 373068 8969083 ~ 8971699 (+)
G210968 NA non-coding downstream 383793 8979808 ~ 8980033 (+)
G210972 NA non-coding downstream 414997 9011012 ~ 9011388 (+)
G211022 NA non-coding downstream 825437 9421452 ~ 9421689 (+)
gngt2b NA other upstream 79008 8496613 ~ 8497654 (+)
dydc2 LOC101484997 other upstream 514385 8057659 ~ 8062277 (+)
LOC120551082 LOC104957044,LOC103364391,LOC100710506,LOC102194388,LOC102291580 other upstream 603446 7963369 ~ 7973216 (+)
ormdl3 ormdl3,LOC102783025,LOC100707365,LOC102304808,LOC107387618,LOC106521946 other upstream 1533454 7030818 ~ 7043208 (+)
psmd11b LOC103367354,LOC102209997,LOC101470828,LOC100706559,LOC101174707 other upstream 1616586 6951067 ~ 6960076 (+)
LOC120551795 NA other downstream 446631 9042646 ~ 9050128 (+)
rpl38 NA other downstream 971514 9567529 ~ 9576418 (+)
LOC120551355 LOC102295310,LOC103352803,LOC102796261,LOC107102520 other downstream 1243004 9839019 ~ 9849898 (+)
qki2 LOC104923420,LOC105926446,LOC103481625,LOC106939037,LOC106928957,LOC102292206,LOC100712570,LOC103376616,LOC106516672,LOC107090926,LOC103381788,LOC106519024 other downstream 1288355 9884370 ~ 9898509 (+)
G211151 NA other downstream 1457246 10053261 ~ 10062702 (+)

Expression


Co-expression Network