acsf2 (LOC104944427,LOC100698949,LOC102195174)


Basic Information

Item Value
gene id acsf2
gene name LOC104944427,LOC100698949,LOC102195174
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 6153708 ~ 6196023 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788352.1
GAAAACATGTGTGTCAACTCGGATCAAGGTCCGAGCAAGTAGCTGCCAGCCGGCCAATAGCTGCAGACTGCTGTCCCGTACACTATATAGTCGGAGTAGATGTCCTGCTGATCACTATCAGTCGCTGTAAGTGCAGGTTTCTCCAAGTCAATCTGAAGAAGTTCTCTGTTTACTATCTGCTTTACTTCAGTGCGCGCAGGGCGCGGTGAGCTGCAGCTGCACAATGATCCCCAAGATTGCCTTGTGCGCCCAGTTTCTTCGTCGGAACAACCGTGTTTTTACCAGATCTTTAAAGGTTTTACAGAGACAATGGACACGTCATCCAGGATTACCTGCAGCGAGTCGTGGTATTCATGTGGACTCTCCGCCCATCATCCCGACTCTCACTACCAGCTACGCCCACGGCACGTCTTCCACATCTCTGCGCCACGCAACAGTAGGAGAGGCTCTGCTGAAGGCTGTGGAGCGCTCGCCTGACAGAGAGGCCGTGGCCTTTCTACAAGACGGAGTCCGCAAGACCTTTGCACAGCTTCAGCAGGATGTGGATCAAGCTGCAGCCGGGCTGTTGGCAATCGGACTGCAAAAAGGAGACCGGCTCGGCATGTGGGGGCCAAACACTTATGAATGGATCCTGTTCCAGTTTGCCACAGCCAAAGCCGGCATTATATTGGTATCCGTGAACCCGGCGTACCAGCTGCAGGAGGTGGAGTTTGCATTGCGGAAGGTTGGGTGTAAAGCCATAGTGTGCCCGACACAGTTTAAGACTCAGAAGTACTGTGACATGCTGAGACAGATCTGTCCGGAGATCGAGACTTCCACCCCAGGAGACATCAGGAGTGCACGGCTCCCAGACCTCCGCTCTGTGATTGTCATTGATAGTCGACAACCAGGAATGTTCCATCTTGAGGATGTGATGCAGGCAGGAAGCAGCCAGTACATACAGCAGCTTCAGGATCTGCAGAAGAAGATCTCCTTTGACGACCCCATAAACATCCAGTTCACTTCGGGCACAACTGGGGCTCCAAAGGGTGCCACCTTGTCTCATCACAACATCATCAACAATGCCTACTTTGTTGGCAGTAGAATGGGATACACATGGAGGCCTGACCTTCGTATCTGCCTGCCTGTGCCTATGTACCACTGCTTCGGCTCTGTGGGTGGTGGGATGTGTGTTGCCGTGCACGGCATCTCCATTGTATTTCCCTCTTCAGGGTACGATGGAAAGGCCACTTTAGCAGCTCTGGAGAGTGAAAGGTGCACCTACATCTACGGCACCCCCACCATGTATGTTGACTGGATCAACCAGCCAGACTTGGCTAAATATGACTTGTCGTCAGTTCGCTCAGGCATCATGGCTGGTTCCCCTTGTCCTCCAGAAGTTGTGAAGAAGGTCATTACTATGATGGGCGTCAAAGAAATAACAATTGGATACGGCACTACGGAGAACAGCCCCGTGACGTTCTGCGGCTCGCCGTCAGACAACCTGGACAGGAAGTGTGACACCGTCGGCTACATCATGGACCACATAGAGGCTAAAATCGTGAACCCTTCAACAGGAGAGATCGTGCCTCTGGGGATGCTGGGGGAGATTATGATCAGGGGCTACTGCGTGATGTTGGAGTACTGGGGGGACGAAGCCAAGACACGAGAGTGCATCACTAAAGAAGGATGGTACAAAACTGGAGACATTGGCAGCTTGGATGTGCACAGCTACCTCCGAATCGAGGGCAGGATCAAAGACATGATcatcagaggaggagagaacaTTTACCCAGCGGAGATCGAACAGTTTCTGCACACGCACCCCAAAATCAAGGAGGCACAGgtGGTCGGAGTTGCGGACCCCCGCATGGGTGAAGAAGTCTGTGCCTGTATCAAACTAGTAGACGGAGAGGACTGCACTGAAGAAGAAATCAAAGCTTACTGCAAAGGACAGATCGCTCACTTCAAGATTCCTCGCTACGTACTCTTTGTGACCAGCTACCCGCTCACCATTACTGGAAAGATCCAGAAGAACAAACTACGCGCGGAAGCTGAGAAGCTGCTCGAACTGAGGAAGAAAAAATGAGGACCAGCTCATGTATAGAGAATTCAACTACTGTGTATCATTTACCACAAACTTCAATTGTCCATATGTTTAGGCAAGTTACTGAGCCTTTTGTAAATTACATATTGACAATTATATACtgacaatatattatatataatttgtgACCCATTTTTAAGAATTCTATCTTCAGTAAGAACCAATGGGTTTAGGGTTGAGTGACAAACGTTAGGAAAGTTGTAAAGTATTTCGAGATGGACTAACCGATTCTTTGGTTTGGTCTTTTCAAGGGAtttgacaataacaaaaataaagacTAACAGTCTTATATTTAACATCATTCTCTGTAATAATAGAGGTGTAATAGGAAATGTGAACATGCAGTATACTGAAAATAAGCGCAGAAATAGTTGGTGCTCAGTGCTCCACTGTTCTTTTTCATTCTGCAAAAAGCTATTCAAATATTTTTACATCAACTTGAAATAAACTTTGTACTACATTATTAAAACCA

Function

NR:

description
PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K23617 ACSF2; medium-chain acyl-CoA ligase, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788352.1 True 2558 mRNA 0.48 16 6153708 6196023

Neighbor

gene id symbol gene type direction distance location
tap2t LOC104944438 coding upstream 3180 6138198 ~ 6150528 (+)
LOC120551246 NA coding upstream 15695 6102549 ~ 6138013 (+)
LOC120551245 slc16a5 coding upstream 15699 6123938 ~ 6138009 (+)
LOC120551300 LOC100698148,LOC102195172,LOC103398848 coding upstream 110793 6025572 ~ 6042915 (+)
LOC120551191 LOC100697881,LOC102194592,LOC102300228,LOC101486561,LOC104965354,LOC103398847 coding upstream 134542 5923341 ~ 6019166 (+)
chmp2a chmp2a coding downstream 265514 6461537 ~ 6465229 (+)
LOC120551142 NA coding downstream 276863 6472886 ~ 6474833 (+)
snf8 snf8 coding downstream 279977 6476000 ~ 6482569 (+)
ttll6 ttll6 coding downstream 297675 6493698 ~ 6510384 (+)
hoxb6b hoxb6,LOC106521970 coding downstream 319198 6515221 ~ 6517872 (+)
G210183 NA non-coding upstream 56147 6072924 ~ 6097561 (+)
G210185 NA non-coding upstream 107214 6044505 ~ 6046494 (+)
G210155 NA non-coding upstream 308950 5757052 ~ 5844758 (+)
G210213 NA non-coding downstream 5884 6201907 ~ 6203384 (+)
G210256 NA non-coding downstream 251388 6447411 ~ 6484415 (+)
G210431 NA non-coding downstream 399246 6595269 ~ 6596781 (+)
G210444 NA non-coding downstream 460506 6656529 ~ 6657157 (+)
LOC120550868 NA non-coding downstream 463440 6659463 ~ 6662634 (+)
kctd2 kctd2,LOC102796578,LOC107089511,LOC103371831,LOC103398851,LOC106521991 other upstream 60970 6083102 ~ 6092738 (+)
LOC120550763 LOC100696279,LOC101467831,LOC107093968 other upstream 465812 5591335 ~ 5687896 (+)
map2k6 LOC103367941,LOC105926483,LOC102221885,LOC100697345,LOC103150707 other upstream 1437125 4674237 ~ 4716583 (+)
LOC120551345 plekha1,LOC106957628 other upstream 2125426 3998373 ~ 4028282 (+)
LOC120550571 NA other upstream 2330457 3818853 ~ 3823251 (+)
LOC120551157 NA other downstream 23846 6219869 ~ 6270445 (+)
stx4 stx4 other downstream 182113 6378136 ~ 6392578 (+)
G210266 msl1 other downstream 274633 6470656 ~ 6472155 (+)
psmd11b LOC103367354,LOC102209997,LOC101470828,LOC100706559,LOC101174707 other downstream 755044 6951067 ~ 6960076 (+)
ormdl3 ormdl3,LOC102783025,LOC100707365,LOC102304808,LOC107387618,LOC106521946 other downstream 834795 7030818 ~ 7043208 (+)

Expression


Co-expression Network