LOC120551397


Basic Information

Item Value
gene id LOC120551397
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1298027 ~ 1303083 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788820.1
TCTTTGACAAACAGACTGTGTTTTTTGTGAACAAACACTCGCTACTGATAACGCTGACGAGGACACGTGGCAGACACAGATTGGTCTCGTTCACCCACAGCGAGAAGTTTTCATTGGCCACTTCCTTGACTAAGTTGATGAACTCTGAACAACTGAACAACACTATACAGAAGTTAAACTTTCCTGCTGAGTCACAACGTTCATCAAATACCTCAGACGCTTTGGTACACGGCACCTTTCCAGCAAGCAAGGGCACCTTCAGCTGCAGGGGGCGAAGTGCTATGGATATTCCACATGATGATGAACAAATTGcagaaattaaaaaagaacTGCAAACCAACGGATCCTCTTCAGCCACTGCAAAGATCCAGACTTATTTGGACAAACTGGATAATGTTCAGCTAAATATTGCGATCACAGGAGAGTGTGGTTCTGGTAAATCCACCTTTGTTAATGCTTTTAGAGGCATAGACAACAGCGATAAGGAAAGAGCTGCCCCTACTGGTGTTAAAGAAACCACCATAAAAGTTACACCATACCCCCATCCAAATTATCCCAATGTTACACTTTGGGATCTTCCTGGTATCGGCACCACCAAGTTTCCAGCTGACAAGTACCTGAAGCTTGTTGAATTCAAAAGGTATGacttcttcatcatcatctcagctgaTCGCTTCAGAGAAAATGATGTGAAGCTCGCTAAGGAGATtcagaagatgaagaagaagttATACTTTGTTCGCTCAAAGATTGACCACAACATACGTGATGAGGAAGAAACTCGGGGGTCAGAGTTCAACAAAGAAGAGACCCTTAAAGAAATAAGGGAGGACTGCATTCAAGGTCTTAAAGGACGTGTTGAGTCTCCAAAAGTCTTCCTGGTGTCCAGCCGTAAACTCCACCTGTATGATTTCCCTCTGTTACAGAAAACTTTTCAGGAAGAACTTCCTGCACACAAGAGGGATGCTCTGCTGTTGGCCTTGCCCAATGTCAGTCTTGAAATAAtcataaagaaaaaagaaactttaCAGGCAAGAATAAAGTACCTTGCTGCTGTGTCTGCACTCGGAGCAGCTGTACCAGTTCCTGGGCTTTCTTTTGCTGCTGATATCATCATGATGGTTTTTACCATTAGACAGTACCAAGTTACCTTTGGTCTTGATAGCGAGTCACTGCAGCGTCTTGCTCAGACTGTACGTGTGCCTTTGGATGAGCTTAAAGCAGTGATGACATCACCACTGGCTGGAAATGAAATAAGCAAAGATCTTATCATTAAGATACTGAGCTCTTCTGTGGCTTTCCTTTCATTGACAACAGCAGAGGAAGGGTCTAGATTTCTTCCAATTTTTGGAATCCCAGCAGCAATGGGCCTCTCTTTTCTCACCACATACAAATCTCTCAAAATGTTCCTCGACATGCTTGCTGAGGATGCACAGAAGGTACTTAAAAAGGCCCTGGGTTTGAACACCCCATTGTGATATCATAGATAGAttgatctttattgtcattgtgctcaAAGTGACTTTACCAGCTCTTCAGTAGATTTAGTAATAGTGACAAGGTTTTTGGTGGTGAGGTAGCAGCATAAGGGGTTGTTAGTGCAAAAAAGTTGTGCAATGTTTCAGTCTTTGGCGTTATGGGGAAGACAGTCGCCTTATGGGATCATTAGGTGATCATTTCAAACTTGGTCTGCAAAGCAAAGCCAAGACTTTGAGCAAATGATGATGCTAACGGTCTAAATACTGAATGTTaatctgaatgaaatgaaaggttttgaaaaatctaataaaatgtTCATTGACATTAGCCACAATTTGTGATTTTGTCGTAAcatgaaattatttgaaactaatgtGCTTGCACTTGTAATAAGAAAAGTATTTATATAGCTGATGTACTGCAATAGTTTTTCAAGTAAATGTaattatatagcctacattacaTTTAACCTGttctttgtattgtattttctgtatttagtattgttttattttagtttagtttacttTTGTTCTCTTTATGTACTGAAGCTTTCTtgagttttattattttgttttatcatTAAGTAAGGTTGTAATGTTCTTTGGATGGGAATTAATAtcgttttgttatgttttgtcAGTATGATGCTGAACTATTCAAACATTGTATAATATTTGTAAAAGtttgcaaattaaaaaaaattatgtaattatttttttacttgcACTTGATTGTTGCTGTTAGGATTTTGTAACTTCATGGTTGAATGaatggataaaagcatcagctaaatgtcaTGTGATGAATGTAATGAAGGCTTTTGAGTaatcaaataaaatgttcaTGAAATGA
>XM_039788821.1
TTTGACAAACAGACTGTGTTTTTTGTGAACAAACACTCGCTACTGATAACGCTGACGAGGACACGTGGCAGACACAGATTGGTCTCGTTCACCCACAGCGAGAAGTTTTCATTGGCCACTTCCTTGACTAAGTTGATGAACTCTGAACAACTGAACAACACTATACAGAAGTTAAACTTTCCTGCTGAGTCACAACGTTCATCAAATACCTCAGACGGAAGTGCTATGGATATTCCACATGATGATGAACAAATTGcagaaattaaaaaagaacTGCAAACCAACGGATCCTCTTCAGCCACTGCAAAGATCCAGACTTATTTGGACAAACTGGATAATGTTCAGCTAAATATTGCGATCACAGGAGAGTGTGGTTCTGGTAAATCCACCTTTGTTAATGCTTTTAGAGGCATAGACAACAGCGATAAGGAAAGAGCTGCCCCTACTGGTGTTAAAGAAACCACCATAAAAGTTACACCATACCCCCATCCAAATTATCCCAATGTTACACTTTGGGATCTTCCTGGTATCGGCACCACCAAGTTTCCAGCTGACAAGTACCTGAAGCTTGTTGAATTCAAAAGGTATGacttcttcatcatcatctcagctgaTCGCTTCAGAGAAAATGATGTGAAGCTCGCTAAGGAGATtcagaagatgaagaagaagttATACTTTGTTCGCTCAAAGATTGACCACAACATACGTGATGAGGAAGAAACTCGGGGGTCAGAGTTCAACAAAGAAGAGACCCTTAAAGAAATAAGGGAGGACTGCATTCAAGGTCTTAAAGGACGTGTTGAGTCTCCAAAAGTCTTCCTGGTGTCCAGCCGTAAACTCCACCTGTATGATTTCCCTCTGTTACAGAAAACTTTTCAGGAAGAACTTCCTGCACACAAGAGGGATGCTCTGCTGTTGGCCTTGCCCAATGTCAGTCTTGAAATAAtcataaagaaaaaagaaactttaCAGGCAAGAATAAAGTACCTTGCTGCTGTGTCTGCACTCGGAGCAGCTGTACCAGTTCCTGGGCTTTCTTTTGCTGCTGATATCATCATGATGGTTTTTACCATTAGACAGTACCAAGTTACCTTTGGTCTTGATAGCGAGTCACTGCAGCGTCTTGCTCAGACTGTACGTGTGCCTTTGGATGAGCTTAAAGCAGTGATGACATCACCACTGGCTGGAAATGAAATAAGCAAAGATCTTATCATTAAGATACTGAGCTCTTCTGTGGCTTTCCTTTCATTGACAACAGCAGAGGAAGGGTCTAGATTTCTTCCAATTTTTGGAATCCCAGCAGCAATGGGCCTCTCTTTTCTCACCACATACAAATCTCTCAAAATGTTCCTCGACATGCTTGCTGAGGATGCACAGAAGGTACTTAAAAAGGCCCTGGGTTTGAACACCCCATTGTGATATCATAGATAGAttgatctttattgtcattgtgctcaAAGTGACTTTACCAGCTCTTCAGTAGATTTAGTAATAGTGACAAGGTTTTTGGTGGTGAGGTAGCAGCATAAGGGGTTGTTAGTGCAAAAAAGTTGTGCAATGTTTCAGTCTTTGGCGTTATGGGGAAGACAGTCGCCTTATGGGATCATTAGGTGATCATTTCAAACTTGGTCTGCAAAGCAAAGCCAAGACTTTGAGCAAATGATGATGCTAACGGTCTAAATACTGAATGTTaatctgaatgaaatgaaaggttttgaaaaatctaataaaatgtTCATTGACATTAGCCACAATTTGTGATTTTGTCGTAAcatgaaattatttgaaactaatgtGCTTGCACTTGTAATAAGAAAAGTATTTATATAGCTGATGTACTGCAATAGTTTTTCAAGTAAATGTaattatatagcctacattacaTTTAACCTGttctttgtattgtattttctgtatttagtattgttttattttagtttagtttacttTTGTTCTCTTTATGTACTGAAGCTTTCTtgagttttattattttgttttatcatTAAGTAAGGTTGTAATGTTCTTTGGATGGGAATTAATAtcgttttgttatgttttgtcAGTATGATGCTGAACTATTCAAACATTGTATAATATTTGTAAAAGtttgcaaattaaaaaaaattatgtaattatttttttacttgcACTTGATTGTTGCTGTTAGGATTTTGTAACTTCATGGTTGAATGaatggataaaagcatcagctaaatgtcaTGTGATGAATGTAATGAAGGCTTTTGAGTaatcaaataaaatgttcaTGAAATGA

Function

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component
GO:0005507 copper ion binding molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788820.1 True 2334 mRNA 0.38 4 1298027 1303083
XM_039788821.1 False 2278 mRNA 0.38 3 1298029 1303083

Neighbor

gene id symbol gene type direction distance location
ptenb pten coding upstream 104806 1181045 ~ 1193221 (+)
LOC120551414 NA coding upstream 208867 1043694 ~ 1089160 (+)
LOC120551421 NA coding upstream 248417 1043672 ~ 1049610 (+)
LOC120551430 atad1 coding upstream 279137 1015297 ~ 1018890 (+)
LOC120551425 NA coding upstream 315289 977736 ~ 982738 (+)
LOC120551407 NA coding downstream 75568 1378651 ~ 1380831 (+)
LOC120551423 NA coding downstream 82280 1385363 ~ 1398958 (+)
LOC120551406 NA coding downstream 110705 1413788 ~ 1427061 (+)
LOC120551410 NA coding downstream 127389 1430472 ~ 1437585 (+)
LOC120551412 NA coding downstream 158191 1461274 ~ 1464607 (+)
G208864 NA non-coding upstream 71342 1209423 ~ 1226685 (+)
LOC120551437 NA non-coding upstream 97854 1198922 ~ 1200173 (+)
G208853 minpp1 non-coding upstream 197179 1099315 ~ 1100848 (+)
G208841 NA non-coding upstream 204282 1015928 ~ 1093745 (+)
G208885 NA non-coding downstream 8973 1312056 ~ 1335340 (+)
G208886 NA non-coding downstream 26055 1329138 ~ 1383544 (+)
G208887 acta2,LOC107594158,LOC105896556,LOC101064889,LOC103374497 non-coding downstream 29663 1332746 ~ 1333550 (+)
G208888 NA non-coding downstream 31899 1334982 ~ 1367880 (+)
G208889 acta2,LOC103382302 non-coding downstream 32479 1335562 ~ 1341958 (+)
lipf lipa other upstream 42350 1192295 ~ 1255677 (+)
G208867 NA other upstream 92779 1204590 ~ 1205248 (+)
G208852 minpp1 other upstream 204430 1090547 ~ 1093597 (+)
G208851 minpp1,LOC102795090 other upstream 238587 1058842 ~ 1059440 (+)
LOC120551422 NA other upstream 258658 1027301 ~ 1039369 (+)
stambpl1 NA other downstream 10118 1313201 ~ 1328029 (+)
G208777 NA other downstream 127426 1430509 ~ 1493181 (+)
G208911 NA other downstream 162935 1466018 ~ 1571837 (+)
LOC120550772 NA other downstream 195364 1498447 ~ 1577370 (+)
LOC120550774 NA other downstream 291398 1594481 ~ 1616080 (+)

Expression


Co-expression Network