LOC120551406


Basic Information

Item Value
gene id LOC120551406
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1413788 ~ 1427061 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788829.1
GGGAGAGACACCATGAGACACTAGAGATATCAGAGACATCAAAGACAACAGAGCATCCAAATACACTGACATCAGGATCTTCATCTTCAGTTCAGCTGAAATCTGACCATGAAGctggtTTCAGTCGTCCTCCTCCTGCTGGCCCCCCTGTTGACCAGCTGCCAGCAGCTCATTCTGCCGTTGGACTGCAGTGACATTTATAGTAATGACAACAGCCGACCCAGTGGAGTGTACACCATCTATCCCATCGGACCCACGTCTGCTGTCCAGgtgtactgTGACATGGATTCAGAAGGAGGACGGTGGACGGTGTTCCAGAGGAGGATGGACGGCACAGTGAACTTCTACAGGGGCTGGGATCAATACAAGACCGGCTTTGGTATCGCTGCTGGAGAGTACTGGCTCGgtCTCCAGTCTCTCTTCTACATGACTCTGAGGAAAAAGTACGAGCTGCTGGTCGACATGGAGGACTTTGAAGGAAACAAAGTGTTCGCTCGTTACTCCTCATTCTCCATCGATGCTGAGTCCTCCGGATACACACTGCATGTTTCTGGATTCATTAATGGAGGAGCAGgAGACACCTTGACTTATCACAACATCACTTATCGTCACAATGGAATGAAGTTCTCCACCTTTGACAAAGACCAGGACACCTATGCTGGAGGGAACTGTGCCAGAAAATACCTGGGGGCGTTCTGGTACAGCAACTGTTTCGTTACAAATCCAAATGGTGTTTATCGTTGGGGGGCTGACAGCACTATCCCTGGTGTTGGAGTGCAGTGGAACCAATGGAAAGGTCGTAACTACTCCCTGAAGACCATCAGCATGAAGATCCGTCCTGTGCAGTAGTTCTCCAGGcgttctctttctcttctgatttctttctttttctctcattaAGCATTTAATCTCAGAACAGGTCTTATTTTCCTGAACCTAAACACAAGAAAACCAACTGAGTGTGTAAATCTTGTTACTGTCTGTGATGGCTTAAAGCAGTCGCAGCTCGCTGCAACATGGAAGAAAAGTCAGATGTGTCTCCAGTTGGGCGGCTGCAGCAGGAAAGTAGGGCCCATAATCTTTAAATGGAAACACATATATAGTCTGATCAGCTGTTAATCACTGCATGAACTGATAACACGAGtctaaaagagagaaagaagtaaagaaaatgaaaagtataaaaagatCTTTGCAGTTCAGGACAGCCAGTTGATGTTTGGTGGAGGTTTGAAACTGTAATGTGAATCTTTATCTGCTGTACGGTGACAATAAATAAGAAGCTGAGCATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788829.1 True 1294 mRNA 0.46 6 1413788 1427061

Neighbor

gene id symbol gene type direction distance location
LOC120551423 NA coding upstream 14830 1385363 ~ 1398958 (+)
LOC120551407 NA coding upstream 32957 1378651 ~ 1380831 (+)
LOC120551397 NA coding upstream 110705 1298027 ~ 1303083 (+)
ptenb pten coding upstream 220567 1181045 ~ 1193221 (+)
LOC120551414 NA coding upstream 324628 1043694 ~ 1089160 (+)
LOC120551410 NA coding downstream 3411 1430472 ~ 1437585 (+)
LOC120551412 NA coding downstream 34213 1461274 ~ 1464607 (+)
LOC120551417 NA coding downstream 63101 1490162 ~ 1497667 (+)
LOC120550771 LOC103374694 coding downstream 126796 1553857 ~ 1592744 (+)
rpp30 rpp30,LOC102790171 coding downstream 221374 1648435 ~ 1663464 (+)
G208891 NA non-coding upstream 23893 1356116 ~ 1389895 (+)
G208886 NA non-coding upstream 30244 1329138 ~ 1383544 (+)
G208888 NA non-coding upstream 45908 1334982 ~ 1367880 (+)
G208890 NA non-coding upstream 50097 1346805 ~ 1363691 (+)
G208889 acta2,LOC103382302 non-coding upstream 71830 1335562 ~ 1341958 (+)
G208914 NA non-coding downstream 64629 1491690 ~ 1492031 (+)
LOC120550773 NA non-coding downstream 80280 1507341 ~ 1529819 (+)
G208916 NA non-coding downstream 101250 1528311 ~ 1614871 (+)
G208917 NA non-coding downstream 121712 1548773 ~ 1550127 (+)
G208912 NA non-coding downstream 149852 1576913 ~ 1634480 (+)
stambpl1 NA other upstream 85759 1313201 ~ 1328029 (+)
lipf lipa other upstream 158111 1192295 ~ 1255677 (+)
G208867 NA other upstream 208540 1204590 ~ 1205248 (+)
G208852 minpp1 other upstream 320191 1090547 ~ 1093597 (+)
G208851 minpp1,LOC102795090 other upstream 354348 1058842 ~ 1059440 (+)
G208777 NA other downstream 3448 1430509 ~ 1493181 (+)
G208911 NA other downstream 38957 1466018 ~ 1571837 (+)
LOC120550772 NA other downstream 71386 1498447 ~ 1577370 (+)
LOC120550774 NA other downstream 167420 1594481 ~ 1616080 (+)
noc3l noc3l other downstream 189661 1616722 ~ 1636135 (+)

Expression


Co-expression Network