LOC120551414


Basic Information

Item Value
gene id LOC120551414
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1043694 ~ 1089160 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788844.1
TGCCAAAAGAGTGATTGATTCAATCAGTGGGTTCAGGCAACTGAGCATTTGGTTCAGACAATAGGgtttagtgttttagcaattgagaaaaactgtaatcttAACAGTATAAATAAGTGTGAGAGAGACACCAGAGACATCAGAGCACCGAGACAACCTGACATCAGGATCTTCATCAAATCACTTCTGCTGAAATCTGACCATGAAGctggtTTCAGTCGTCCTCGTCCTGCTGGCCCCTCTGTTGACCAGCTGCCAGCAGCTCGTTCTGCCGGTGGACTGCAGTGACATTTATAATAATGACAACAGCCGACCCAGTGGAGTGTACACCATCTATCCCATCGGAGCCACGTCTGCTGTCCAGgtgtacTGTGACATGGATTCAGAAGGACGGTGGACGGTGTTCCAGAGGAGGATGGACGGCACGGTGAACTTCTACAGGGGTTGGGATCAATACAAGACAGGCTTTGGTATCGCTGCTGGAGAGTACTGGCTCGGTCTGGAGTCTCTCTACCACCTGACTCAGAAGAAAAGGTACGAGCTGCTGGTCGACATGGAGGACTTTGAAGGAAACAAAGCGTTCGCTCTTTACTCCTCATTCTCCATTAACACTGAGTGTGACGGATACAGACTGAATGTTTCTGGATTCACTGATGGAGGAGCAGgAGACTCCCTGAAAGTTCACAATGGACAGAAGTTCTCCACCTTCGATAAAGAACAGGACTCTGATGTAGCAAGGCACTGTGCCAGAACATTCTTGGGGGCGTTCTGGTACAACGGATGTTTCTTAGCAAATCCAAACGGTGTTTATCGTTGGGGGTTTGACAGCACTCTCTTTGCTGTTGGGGTGGAGTGGGACACTTGGAAAGGTGATGACTACTCCCTGAAGGCCATCAGCATGAAGATCCGTCCTGTGCTGTAGTTCTCCAGGACCAACGTACAGCAGAATATCAGCTCATCTCTTCTGATTTCTTTCTCTCATTAAGCATTTAATTTCACAACCGGTTTTAAACTGATGTTTGTAAATCttgttactagggttgggtactgaaacGCTGTGCCAATAGGGCACTGGTTCCGACGTAAATGGTAGTAGCAAGACCAAATAACAACAAATTTCGGTGCCtgattcttttatttatttatttttttcccagaaGAAACGCTGTACAGGACGCTATGtcaccgttagctagtagctggattaaacccaatggttaaaatgctaacagcttacgttaagcggtgtaaagtgtgactgtatttccctgtagaggatcCCGACCCCGTGATGTAATAGTATGTCTGCcgctgtcggaaaaacaacacagacggtgcatttaCTTGAAACTCTCCTCGCCAGCCtcatgctgcattcaaagttattgtaaattaCCCTTTTCTCATTTGGTGCTTGTTTTTagttgtttaacagcaattgactgctgaaataagtcattgttattacattattaatcaatcacaTGGCCTCAGcaacaagctgttctttaatgttgCGAACTGT
>XM_039788845.1
ACGCTAGAGATATCAGAGACATCAAAGACAACAGAGCATCCAAACACACTGACATCAGGATCTTCATCTTCAGTTCAGCTGAAATCTGACCATGAAGctggtTTCAGTCGTCCTCGTCCTGCTGGCCCCTCTGTTGACCAGCTGCCAGCAGCTCGTTCTGCCGGTGGACTGCAGTGACATTTATAATAATGACAACAGCCGACCCAGTGGAGTGTACACCATCTATCCCATCGGAGCCACGTCTGCTGTCCAGgtgtacTGTGACATGGATTCAGAAGGACGGTGGACGGTGTTCCAGAGGAGGATGGACGGCACGGTGAACTTCTACAGGGGTTGGGATCAATACAAGACAGGCTTTGGTATCGCTGCTGGAGAGTACTGGCTCGGTCTGGAGTCTCTCTACCACCTGACTCAGAAGAAAAGGTACGAGCTGCTGGTCGACATGGAGGACTTTGAAGGAAACAAAGCGTTCGCTCTTTACTCCTCATTCTCCATTAACACTGAGTGTGACGGATACAGACTGAATGTTTCTGGATTCACTGATGGAGGAGCAGgAGACTCCCTGAAAGTTCACAATGGACAGAAGTTCTCCACCTTCGATAAAGAACAGGACTCTGATGTAGCAAGGCACTGTGCCAGAACATTCTTGGGGGCGTTCTGGTACAACGGATGTTTCTTAGCAAATCCAAACGGTGTTTATCGTTGGGGGTTTGACAGCACTCTCTTTGCTGTTGGGGTGGAGTGGGACACTTGGAAAGGTGATGACTACTCCCTGAAGGCCATCAGCATGAAGATCCGTCCTGTGCTGTAGTTCTCCAGGACCAACGTACAGCAGAATATCAGCTCATCTCTTCTGATTTCTTTCTCTCATTAAGCATTTAATTTCACAACCGGTTTTAAACTGATGTTTGTAAATCttgttactagggttgggtactgaaacGCTGTGCCAATAGGGCACTGGTTCCGACGTAAATGGTAGTAGCAAGACCAAATAACAACAAATTTCGGTGCCtgattcttttatttatttatttttttcccagaaGAAACGCTGTACAGGACGCTATGtcaccgttagctagtagctggattaaacccaatggttaaaatgctaacagcttacgttaagcggtgtaaagtgtgactgtatttccctgtagaggatcCCGACCCCGTGATGTAATAGTATGTCTGCcgctgtcggaaaaacaacacagacggtgcatttaCTTGAAACTCTCCTCGCCAGCCtcatgctgcattcaaagttattgtaaattaCCCTTTTCTCATTTGGTGCTTGTTTTTagttgtttaacagcaattgactgctgaaataagtcattgttattacattattaatcaatcacaTGGCCTCAGcaacaagctgttctttaatgttgCGAACTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788844.1 True 1525 mRNA 0.45 6 1084225 1089160
XM_039788845.1 False 1414 mRNA 0.46 6 1043694 1089160

Neighbor

gene id symbol gene type direction distance location
LOC120551430 atad1 coding upstream 24804 1015297 ~ 1018890 (+)
LOC120551425 NA coding upstream 60956 977736 ~ 982738 (+)
LOC120551418 NA coding upstream 86061 953123 ~ 957633 (+)
LOC120551416 NA coding upstream 132352 901360 ~ 911342 (+)
LOC120551413 NA coding upstream 146474 888988 ~ 897220 (+)
ptenb pten coding downstream 91885 1181045 ~ 1193221 (+)
LOC120551397 NA coding downstream 208867 1298027 ~ 1303083 (+)
LOC120551407 NA coding downstream 289491 1378651 ~ 1380831 (+)
LOC120551423 NA coding downstream 296203 1385363 ~ 1398958 (+)
LOC120551406 NA coding downstream 324628 1413788 ~ 1427061 (+)
G208840 NA non-coding upstream 27958 950663 ~ 1015736 (+)
G208835 NA non-coding upstream 193467 847867 ~ 850227 (+)
G208785 NA non-coding upstream 236591 788508 ~ 807103 (+)
LOC120551438 NA non-coding upstream 236844 804042 ~ 806850 (+)
LOC120551436 NA non-coding upstream 249352 788477 ~ 794342 (+)
G208853 minpp1 non-coding downstream 10155 1099315 ~ 1100848 (+)
LOC120551437 NA non-coding downstream 109762 1198922 ~ 1200173 (+)
G208864 NA non-coding downstream 120263 1209423 ~ 1226685 (+)
G208885 NA non-coding downstream 222896 1312056 ~ 1335340 (+)
G208886 NA non-coding downstream 239978 1329138 ~ 1383544 (+)
LOC120551422 NA other upstream 4325 1027301 ~ 1039369 (+)
G208768 NA other upstream 388474 654899 ~ 655220 (+)
LOC120551434 LOC101484734,LOC101161619,LOC103361136 other upstream 396472 584120 ~ 647222 (+)
LOC120551420 NA other upstream 421925 614865 ~ 621769 (+)
G208758 LOC104938904 other upstream 493617 536938 ~ 550077 (+)
G208852 minpp1 other downstream 1387 1090547 ~ 1093597 (+)
lipf lipa other downstream 103135 1192295 ~ 1255677 (+)
G208867 NA other downstream 115430 1204590 ~ 1205248 (+)
stambpl1 NA other downstream 224041 1313201 ~ 1328029 (+)
G208777 NA other downstream 341349 1430509 ~ 1493181 (+)

Expression


Co-expression Network