LOC120551430 (atad1)


Basic Information

Item Value
gene id LOC120551430
gene name atad1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1015297 ~ 1018890 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788862.1
tgtcaggttaTCATCATGGGAGCCACTAATCGTCCTCAAGACCTGGACTCTGCTATTCTGAGGAGGATGCCGACCAGGTTTCACATCAACCAGcgAGTATGGGCCAGAGAGAGCAGATCCTCAAACTCATCCTGGAGAACGAGAGCgtggaCCACTCGGTCAACCTTGTTGACGTCTCCAGGGAAACGGATGGTTTTTCAGGAAGTGACCTCAGAGAGATGTGTCGTGACGCTGCTCTGCTCTGCGTCCGAGACTTTGTCCACGCTCAGAACGAcagtccCACGGAGGACTTCATCCGTCCCATCCATCAGTCAGATCTGCAGAAGGCCGTCGGGAAGATGAAGAAATCTAAGATGGCGGGCGGACACGGAGGCCTGCTGCACGCTGCTCTGgactgagagacacacagagagacacacacacacagacacacacagacatatacatacacacacacagacacacacacaca

Function

symbol description
atad1 Predicted to enable ATP binding activity and transmembrane protein dislocase activity. Involved in extraction of mislocalized protein from mitochondrial outer membrane. Located in mitochondrial outer membrane and peroxisomal membrane. Implicated in hyperekplexia 4.

NR:

description
PREDICTED: ATPase family AAA domain-containing protein 1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0017111 nucleoside-triphosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788862.1 True 472 mRNA 0.54 4 1015297 1018890

Neighbor

gene id symbol gene type direction distance location
LOC120551425 NA coding upstream 32559 977736 ~ 982738 (+)
LOC120551418 NA coding upstream 57664 953123 ~ 957633 (+)
LOC120551416 NA coding upstream 103955 901360 ~ 911342 (+)
LOC120551413 NA coding upstream 118077 888988 ~ 897220 (+)
LOC120551427 slc16a12 coding upstream 279726 733408 ~ 735571 (+)
LOC120551421 NA coding downstream 24782 1043672 ~ 1049610 (+)
LOC120551414 NA coding downstream 24804 1043694 ~ 1089160 (+)
ptenb pten coding downstream 162155 1181045 ~ 1193221 (+)
LOC120551397 NA coding downstream 279137 1298027 ~ 1303083 (+)
LOC120551407 NA coding downstream 359761 1378651 ~ 1380831 (+)
G208835 NA non-coding upstream 165070 847867 ~ 850227 (+)
G208785 NA non-coding upstream 208194 788508 ~ 807103 (+)
LOC120551438 NA non-coding upstream 208447 804042 ~ 806850 (+)
LOC120551436 NA non-coding upstream 220955 788477 ~ 794342 (+)
G208830 NA non-coding upstream 243281 767716 ~ 772016 (+)
G208784 NA non-coding downstream 20235 1039125 ~ 1049628 (+)
G208850 NA non-coding downstream 37996 1056886 ~ 1058428 (+)
LOC120551440 NA non-coding downstream 52690 1071580 ~ 1083434 (+)
G208853 minpp1 non-coding downstream 80425 1099315 ~ 1100848 (+)
LOC120551437 NA non-coding downstream 180032 1198922 ~ 1200173 (+)
G208768 NA other upstream 360077 654899 ~ 655220 (+)
LOC120551434 LOC101484734,LOC101161619,LOC103361136 other upstream 368075 584120 ~ 647222 (+)
LOC120551420 NA other upstream 393528 614865 ~ 621769 (+)
LOC120551395 LOC100696016,LOC101071475 other upstream 457804 325913 ~ 557493 (+)
LOC120551422 NA other downstream 8411 1027301 ~ 1039369 (+)
G208851 minpp1,LOC102795090 other downstream 39952 1058842 ~ 1059440 (+)
G208852 minpp1 other downstream 71657 1090547 ~ 1093597 (+)
lipf lipa other downstream 173405 1192295 ~ 1255677 (+)
G208867 NA other downstream 185700 1204590 ~ 1205248 (+)

Expression


Co-expression Network