synpo2lb (LOC104964751)


Basic Information

Item Value
gene id synpo2lb
gene name LOC104964751
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 10537342 ~ 10549611 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789129.1
CCTCCGACACAGCATTCCAGTTTAAGCAGATGAAAGCCAGCCACCCCCTGTCTCCTCATGGTTGGAGTGATTTGCCGTGGTCACCGAAAGGAGCGGGAGGCAGAAGCCTCACACTCAATCATTGATAGTTGCAGAGTGTGAGGAAcggaagaaggagagagaaactgagacacagtcacacacacacacacggcaggcTGTGAGCAGGGAGCAGGGATGGTAGCTGAGGAGATTGTTGTCTCCCTCTCAGGGGGTTCCCCGTGGGGCTTCAGACTGCAGGGAGGAGCAGAGCAGCAAAAACCTCTACAGGTGGCCAAGGTACGCAGGCGCAGCAAAGCATGCAAGGCTGGACTGAAGGAGCATGACGAGCTGGTTGCCATTGGCGACCATATGTGTGCAGAGCTCAGTCATGCTCAGGCCATGGGGCTCATAGATACACAGAGCGCTACACTCAACCTGAGGGTTAAAAGGGCCCCTTCTGATTTCCACTCCTCATCTGCATCGCCCCGCTCCTTCATGAGGGTCCTGTCTCCCCCCGTGGGCCCTTTGCCCTCTCACCgttcctccatcctctccccCACTGGGATACCCGGGGGCATCACTTCCCCTCCAGACAGCGAGGCTTACtacggagagacagacagtgacgCGGACACGCAGTCACTCACGCACCGTCGCCAGCGCCGCACACCTCCTCACGCACGCTCACCTGCGCGCTATGACAagcaagaagaggaggagaccTCAGAGATGAGCGGGTATGAGAGCGCCACAGATGCAGTGGTTTCCATGCAGGGGCAGTGGGACGGTCAGTGTCTTCCTGGCGTCCCTCGCAGAGAGCTCATCCTCCAGCCACTCCAGACCGAGTGGACCACTCCagcacacaccccacacactcTGAcccctcacacactcacaccgaCCCCTGATCAAGGCTTGATGGAGGTGGAGGGAGAAGGGGACAGTGGCTTCCAAGAGGCGGGGGGCTGCATTGGGCTGGCCTGCCCACCGCTTGTGTCTCCTGAACGGGCGAAAGAGGCTCTGATGTCGGGCTCTGGTAAACATCTGGTGCCCATGGTGGGACCACAGCAGACCCCAGTCAGCAGCGAGCTCTCCACCACCTACATGGACAAAGCACGACAAGCTAAGTTGCATCGTGGGGAGAGTGTGGtggagaaacaggtaaaagaagcTCGTACTAAATGCCGATCCATTGCCTCTTTGCTGACTGATGCTCCCAACCCCAACTCGAAAGGGGTGCTTATGTTCAAGAAACGCCGGCAGAGGGCCAAGAAGTACACACTGACCTGCTTTGGCAAAGCTGAGGAAGATAGAGGAGGCGAGACAGAAGGAGACACAGAAGGGGAGacagaagaggaaggaggaagctCAATCCTGAGTGGCTCAGAAGTTGATGAAGAGGGATTCTCAGCATCTTTTGACCCTACGTGGGATACCGGGTATCTAGACGTGCTGGACAGGAAAAGCTCTGCCTGCCCGTCAACCACACCAAGTACTCCAACAACGCCAACAACCAAGCACAGCTCGGGGCTGGACATCTCAGCCTATCATACTCCAGGACTTGTGAGCTCTGTCAATCAAAGCCCAGGGTTGGAGGTTTCAGGGCTGGAGAGCTCAGCCTATCAGGGCTCAAGGCTGGAGAGCAGCATTACGAAGCAGCTGATCAGTAACCACCCTGCGCACATGTCTCCTCCAGCTGTGGCTCTGACCAATGGGGGGTTGGTAGCTGTAAGTCGGGCTAGTGTTGTTCTGAGCTCGCCCTCTCAGACGTCCCTTCCAAGTCAAAATGGGCAACATGGCAACCCTAATTCTAGTCCTAACCCTAATCTTAGTCCTAGCCCAATCAGAGACTTAGATCATCACCTGAATCCAGGTGTTCTAAACCGCACTGCACGCCCCTTCACCCCAGGCCCTGCCTCTTCTCGTGCATCTGTAACGTCTGTGATGTTCCGCCCTCCCCAACCCAAACCCACAGCCGTGACCATGGCGACCAAACCTGTTGCGGCTGTCTCCATGGTGACCATCCAACCTACTCACCATCCATCAGGGCCAGATGCAAGGAGAGCGGTGTCTAGCACCTCTCTGTACATCCCCCCAAGAAATAACAACAGCAACACCACTCCCCCCTCTGTTAACTCTCCCCCCTCAGCTCTCTCGcctcccccctctctgtctTCTGCACTTTTCTCCAAGCCGGCCGCAAATCCACCCACATTTTCCCCTCAGCCCGCAGTGTATGCTTCCCCCTCCATCCCGTTCTCTCCTTCTGCAGCTCAAAGTACCCTGTTTTGTCCATCACCTGCTCAACCCTACTCTGCTCCAGCTCGACAGCCATTTCCCTCTCCCCCTGCTCCTACTTATCCACCTCCCTCCACCTGCATTCCTGCTTCTCCCATCTCCCCACCACATCCCTCTGATCCGACTCAGGCCTCCTTCCATGCCCAGCCCAGCcctcctccttgtcctcctccCACCCAACCTTCTCCATCTCCAGCTGTCCACCCTTACATCAACATGACAGGTGCAGTGACTCCTGGCCCCTATGCTGCCATGGCAACTGCCTCCCCACCCCAGCCTCTGGGTGCCGATTCGTTGGGGACACGAGAGGAGCGCATCTCGGTCCCTGCCGCTCGCACCGGCATCCTGCACGATGCCCGTCGCCGTGGCAACAAGAAGCCAATGTTCTGTGCAGTCCAGAACAAAGATGTTAATCCAAACCCGGACTTGCTGTCGATGGTCCAGAACATGGATGACCACTTTGTGAGAACCCCAGGTGCTGAAACTGGAGCTACACCCAGTGGTGAGACCGGACATGAGTCGGGGCCTGAGGAGGACTGGCTGAGACTGGGGGCAGAGGCCTGCAACTTCATGCAAGCTCAACGGAGATCCAGGCCACCTCCTGTAGCTCCCAAACCCCAAACGCCTCAGGTGCCACAGCTGGCGGGGAAGGGAGGTGAGCTGTTTGCCCGCAGGCAGAACAGGATGGATCGGTACGTTGTGGAGCGATCCCCCTCTGCTGCTGCGGCACCTTTCTCTCCTGCCCAGACAAGGGAGTCCTCGCCTACGCCTTCTCTTCCTTCTACCTGGAAGTACTCGTCCAGCATCCGTGCTCCTCCTCCCATCAGCTACAACCCCCTTCTCTCCCCCTCCTGCCCTCTGAAGGCCCAAAAGAAGCCTGAGGTCACAAAGTCCGGACCAGCTGGATCTAAAGGGCAGAAAAAAGGCCTCAAGGCTGTGGACATTATGAGCCACCAGCCCTACCAGCTCAACTCTTCTTTGTTCAGCTATGGGGGTGGGGTTCCCATGGACACCTCCACCTATCAGCAGCAGAAAGGATTGACAAGTCCTCAGAAGACAGCACGAGTATATGAGGTAAAGCGCTTCTCCACGCCCCCGCCGACATCCACAGGGCCCGCTCTCAAAGTTATTGCACCTCGATCAGCTACGACACTCGGAGAACCCCTGTGGCGCTCTGATGTCACATCTCCTCCACCTACAGTTGGCCCCGCCCCCTACCAACCCTATCAGCCTCAAACCCAACCCTACCAACCTCAGTGGGCCacctcccctctgtctcccccaCCTCCCCCTGCCCCTACCACTCCACTTCCTCAGCTCCCCACCTTCTCTGCTGCTCCTGCTCCAAATCCACTCCAGTCTCCTACTTTCTCCCACCTTCAGCCCTCTAACAGTGCGCAGGCCAACAGGCAGTTTAAGAGTGCCCCAGATCTGAGTCCCATGGGCCCCGCTGGTGCCTCCCGGCCTGCATCCAGCACCACGCAACCTAACAGGGTCCCCAGGCCCCGGTTCAGCACTTCCAACCTGGGTCTACAGCCTTGCGTCTGGCGCCCTGGATCCACTATGCACTGAACAGACTCTGATCTGGACATAGAGCAACATTTCTTTAAATAGGTCCATGTGTTTTTGGTACTATAACAATGTTATTCAGGGCTGCAGCTTGGGGTTTTACAGACACATTTTATCATAAGATCTGTTTGGATCAGCCACCCATAAAGCACATTTTAACACTTACATTTAATCTTGTTGACTCATTTATCCAATGCATTTGGCTGTAGTTAGTGGGAACACTGTGTTCTGCAAAAGAAATGTAGTGTGCAAACCtgagaaaagtaaaaagaaaaatggacatCAACGGCAGATtgaaaggacagaaagagatgCTGAGTGAAACTAAAATAAAGTTCTGTAAATATTGTACTGAATGATGAAGTTTAAACATTAAGAAGAATAGAGGATGTGAAAGGACAAGACTTTTGGGACAGAGATTTGGTCGAAGATGGTAAAGAGATGAAAAGGAAAGCACTGATGAAGtgacataataaaaacaatgtctGATGAGGTGTAAAAGATGCAGATTTGACTCATAACTTGACAATTTGTAAACATCCTACAGTACCTGTTGCCATCCTGCATTATCGTATCAGAGACGTTACTTTACTAACATTTTTGAGTACTGTAATTCCCCCTCTGTTATATATATTCTACGGATTTGTGTTTGAGTGtcttttttttgcagttgcACTCTGCAGCAGTGTGTGCTTTGTTTTCTGTAGTTTTTCATAGGGTGAAGAGCACAGCTGCCATTAAGAAGGGAAGCCTTACAGTAGCCTTGATTTCAGATCTGTTGATATGAAACCAGAGATGTATTACATGTTGGTTTAGCTGTTTTCCACAGAGACATGCGGCTGaataaaaatagacatgacTCACCCCA
>XM_039789130.1
AGGATTAGAATAGCTCATTTAAGAGGAGCTGGAAGCTGAGCATGGAAAAAGGCCTCTTGTTCACAGACAGAGCCTCACACACTTGTACACTATCCTGTCTTGTGTTCTCTTATTGTACGCAGGCGCAGCAAAGCATGCAAGGCTGGACTGAAGGAGCATGACGAGCTGGTTGCCATTGGCGACCATATGTGTGCAGAGCTCAGTCATGCTCAGGCCATGGGGCTCATAGATACACAGAGCGCTACACTCAACCTGAGGGTTAAAAGGGCCCCTTCTGATTTCCACTCCTCATCTGCATCGCCCCGCTCCTTCATGAGGGTCCTGTCTCCCCCCGTGGGCCCTTTGCCCTCTCACCgttcctccatcctctccccCACTGGGATACCCGGGGGCATCACTTCCCCTCCAGACAGCGAGGCTTACtacggagagacagacagtgacgCGGACACGCAGTCACTCACGCACCGTCGCCAGCGCCGCACACCTCCTCACGCACGCTCACCTGCGCGCTATGACAagcaagaagaggaggagaccTCAGAGATGAGCGGGTATGAGAGCGCCACAGATGCAGTGGTTTCCATGCAGGGGCAGTGGGACGGTCAGTGTCTTCCTGGCGTCCCTCGCAGAGAGCTCATCCTCCAGCCACTCCAGACCGAGTGGACCACTCCagcacacaccccacacactcTGAcccctcacacactcacaccgaCCCCTGATCAAGGCTTGATGGAGGTGGAGGGAGAAGGGGACAGTGGCTTCCAAGAGGCGGGGGGCTGCATTGGGCTGGCCTGCCCACCGCTTGTGTCTCCTGAACGGGCGAAAGAGGCTCTGATGTCGGGCTCTGGTAAACATCTGGTGCCCATGGTGGGACCACAGCAGACCCCAGTCAGCAGCGAGCTCTCCACCACCTACATGGACAAAGCACGACAAGCTAAGTTGCATCGTGGGGAGAGTGTGGtggagaaacaggtaaaagaagcTCGTACTAAATGCCGATCCATTGCCTCTTTGCTGACTGATGCTCCCAACCCCAACTCGAAAGGGGTGCTTATGTTCAAGAAACGCCGGCAGAGGGCCAAGAAGTACACACTGACCTGCTTTGGCAAAGCTGAGGAAGATAGAGGAGGCGAGACAGAAGGAGACACAGAAGGGGAGacagaagaggaaggaggaagctCAATCCTGAGTGGCTCAGAAGTTGATGAAGAGGGATTCTCAGCATCTTTTGACCCTACGTGGGATACCGGGTATCTAGACGTGCTGGACAGGAAAAGCTCTGCCTGCCCGTCAACCACACCAAGTACTCCAACAACGCCAACAACCAAGCACAGCTCGGGGCTGGACATCTCAGCCTATCATACTCCAGGACTTGTGAGCTCTGTCAATCAAAGCCCAGGGTTGGAGGTTTCAGGGCTGGAGAGCTCAGCCTATCAGGGCTCAAGGCTGGAGAGCAGCATTACGAAGCAGCTGATCAGTAACCACCCTGCGCACATGTCTCCTCCAGCTGTGGCTCTGACCAATGGGGGGTTGGTAGCTGTAAGTCGGGCTAGTGTTGTTCTGAGCTCGCCCTCTCAGACGTCCCTTCCAAGTCAAAATGGGCAACATGGCAACCCTAATTCTAGTCCTAACCCTAATCTTAGTCCTAGCCCAATCAGAGACTTAGATCATCACCTGAATCCAGGTGTTCTAAACCGCACTGCACGCCCCTTCACCCCAGGCCCTGCCTCTTCTCGTGCATCTGTAACGTCTGTGATGTTCCGCCCTCCCCAACCCAAACCCACAGCCGTGACCATGGCGACCAAACCTGTTGCGGCTGTCTCCATGGTGACCATCCAACCTACTCACCATCCATCAGGGCCAGATGCAAGGAGAGCGGTGTCTAGCACCTCTCTGTACATCCCCCCAAGAAATAACAACAGCAACACCACTCCCCCCTCTGTTAACTCTCCCCCCTCAGCTCTCTCGcctcccccctctctgtctTCTGCACTTTTCTCCAAGCCGGCCGCAAATCCACCCACATTTTCCCCTCAGCCCGCAGTGTATGCTTCCCCCTCCATCCCGTTCTCTCCTTCTGCAGCTCAAAGTACCCTGTTTTGTCCATCACCTGCTCAACCCTACTCTGCTCCAGCTCGACAGCCATTTCCCTCTCCCCCTGCTCCTACTTATCCACCTCCCTCCACCTGCATTCCTGCTTCTCCCATCTCCCCACCACATCCCTCTGATCCGACTCAGGCCTCCTTCCATGCCCAGCCCAGCcctcctccttgtcctcctccCACCCAACCTTCTCCATCTCCAGCTGTCCACCCTTACATCAACATGACAGGTGCAGTGACTCCTGGCCCCTATGCTGCCATGGCAACTGCCTCCCCACCCCAGCCTCTGGGTGCCGATTCGTTGGGGACACGAGAGGAGCGCATCTCGGTCCCTGCCGCTCGCACCGGCATCCTGCACGATGCCCGTCGCCGTGGCAACAAGAAGCCAATGTTCTGTGCAGTCCAGAACAAAGATGTTAATCCAAACCCGGACTTGCTGTCGATGGTCCAGAACATGGATGACCACTTTGTGAGAACCCCAGGTGCTGAAACTGGAGCTACACCCAGTGGTGAGACCGGACATGAGTCGGGGCCTGAGGAGGACTGGCTGAGACTGGGGGCAGAGGCCTGCAACTTCATGCAAGCTCAACGGAGATCCAGGCCACCTCCTGTAGCTCCCAAACCCCAAACGCCTCAGGTGCCACAGCTGGCGGGGAAGGGAGGTGAGCTGTTTGCCCGCAGGCAGAACAGGATGGATCGGTACGTTGTGGAGCGATCCCCCTCTGCTGCTGCGGCACCTTTCTCTCCTGCCCAGACAAGGGAGTCCTCGCCTACGCCTTCTCTTCCTTCTACCTGGAAGTACTCGTCCAGCATCCGTGCTCCTCCTCCCATCAGCTACAACCCCCTTCTCTCCCCCTCCTGCCCTCTGAAGGCCCAAAAGAAGCCTGAGGTCACAAAGTCCGGACCAGCTGGATCTAAAGGGCAGAAAAAAGGCCTCAAGGCTGTGGACATTATGAGCCACCAGCCCTACCAGCTCAACTCTTCTTTGTTCAGCTATGGGGGTGGGGTTCCCATGGACACCTCCACCTATCAGCAGCAGAAAGGATTGACAAGTCCTCAGAAGACAGCACGAGTATATGAGGTAAAGCGCTTCTCCACGCCCCCGCCGACATCCACAGGGCCCGCTCTCAAAGTTATTGCACCTCGATCAGCTACGACACTCGGAGAACCCCTGTGGCGCTCTGATGTCACATCTCCTCCACCTACAGTTGGCCCCGCCCCCTACCAACCCTATCAGCCTCAAACCCAACCCTACCAACCTCAGTGGGCCacctcccctctgtctcccccaCCTCCCCCTGCCCCTACCACTCCACTTCCTCAGCTCCCCACCTTCTCTGCTGCTCCTGCTCCAAATCCACTCCAGTCTCCTACTTTCTCCCACCTTCAGCCCTCTAACAGTGCGCAGGCCAACAGGCAGTTTAAGAGTGCCCCAGATCTGAGTCCCATGGGCCCCGCTGGTGCCTCCCGGCCTGCATCCAGCACCACGCAACCTAACAGGGTCCCCAGGCCCCGGTTCAGCACTTCCAACCTGGGTCTACAGCCTTGCGTCTGGCGCCCTGGATCCACTATGCACTGAACAGACTCTGATCTGGACATAGAGCAACATTTCTTTAAATAGGTCCATGTGTTTTTGGTACTATAACAATGTTATTCAGGGCTGCAGCTTGGGGTTTTACAGACACATTTTATCATAAGATCTGTTTGGATCAGCCACCCATAAAGCACATTTTAACACTTACATTTAATCTTGTTGACTCATTTATCCAATGCATTTGGCTGTAGTTAGTGGGAACACTGTGTTCTGCAAAAGAAATGTAGTGTGCAAACCtgagaaaagtaaaaagaaaaatggacatCAACGGCAGATtgaaaggacagaaagagatgCTGAGTGAAACTAAAATAAAGTTCTGTAAATATTGTACTGAATGATGAAGTTTAAACATTAAGAAGAATAGAGGATGTGAAAGGACAAGACTTTTGGGACAGAGATTTGGTCGAAGATGGTAAAGAGATGAAAAGGAAAGCACTGATGAAGtgacataataaaaacaatgtctGATGAGGTGTAAAAGATGCAGATTTGACTCATAACTTGACAATTTGTAAACATCCTACAGTACCTGTTGCCATCCTGCATTATCGTATCAGAGACGTTACTTTACTAACATTTTTGAGTACTGTAATTCCCCCTCTGTTATATATATTCTACGGATTTGTGTTTGAGTGtcttttttttgcagttgcACTCTGCAGCAGTGTGTGCTTTGTTTTCTGTAGTTTTTCATAGGGTGAAGAGCACAGCTGCCATTAAGAAGGGAAGCCTTACAGTAGCCTTGATTTCAGATCTGTTGATATGAAACCAGAGATGTATTACATGTTGGTTTAGCTGTTTTCCACAGAGACATGCGGCTGaataaaaatagacatgacTCACCCCA

Function

NR:

description
PREDICTED: synaptopodin 2-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789129.1 True 4756 mRNA 0.54 5 10537342 10549611
XM_039789130.1 False 4552 mRNA 0.54 5 10539097 10549611

Neighbor

gene id symbol gene type direction distance location
LOC120551199 NA coding upstream 31582 10499483 ~ 10505760 (+)
LOC120551223 NA coding upstream 39354 10493142 ~ 10497988 (+)
LOC120551201 LOC102314534,LOC101476544,LOC102780776,LOC102207113,LOC100693859 coding upstream 101567 10403444 ~ 10435775 (+)
polr3e polr3e coding upstream 155901 10364056 ~ 10381441 (+)
trnal-aag_10 NA coding upstream 173429 10363832 ~ 10363913 (+)
myoz1b NA coding downstream 3130 10552741 ~ 10561330 (+)
opn4b opn4,LOC103371172 coding downstream 109242 10658853 ~ 10682631 (+)
ldb3b ldb3,LOC103370407,LOC100707522,LOC108248204,LOC101168991,LOC106516631 coding downstream 137682 10687293 ~ 10700764 (+)
msh2 msh2 coding downstream 402576 10952187 ~ 10962659 (+)
LOC120550886 LOC103359664,LOC101486147,LOC102308455 coding downstream 571600 11121211 ~ 11141363 (+)
G211306 NA non-coding upstream 29018 10506326 ~ 10508324 (+)
G211256 NA non-coding upstream 292527 10243617 ~ 10244815 (+)
LOC120551816 NA non-coding upstream 320121 10217108 ~ 10217221 (+)
LOC120551818 NA non-coding upstream 320863 10216365 ~ 10216479 (+)
LOC120551242 NA non-coding upstream 348369 10186917 ~ 10188973 (+)
G211323 NA non-coding downstream 23014 10572625 ~ 10587852 (+)
G211321 NA non-coding downstream 47616 10597227 ~ 10611899 (+)
G211327 NA non-coding downstream 133432 10683043 ~ 10683247 (+)
G211356 NA non-coding downstream 265133 10814744 ~ 10815203 (+)
G211349 NA non-coding downstream 267658 10817269 ~ 10818275 (+)
G211301 LOC108248045,LOC103381519 other upstream 6063 10449679 ~ 10531279 (+)
socs3b LOC104933891,LOC103372658,LOC104967452 other upstream 208080 10289579 ~ 10329262 (+)
G211164 rnf157 other upstream 472216 10062785 ~ 10065126 (+)
G211151 NA other upstream 474640 10053261 ~ 10062702 (+)
qki2 LOC104923420,LOC105926446,LOC103481625,LOC106939037,LOC106928957,LOC102292206,LOC100712570,LOC103376616,LOC106516672,LOC107090926,LOC103381788,LOC106519024 other upstream 638833 9884370 ~ 9898509 (+)
usp54b usp54,LOC102211175,LOC101471098,LOC102784247,LOC103371171,LOC103145175,LOC103381525 other downstream 14610 10564221 ~ 10621412 (+)
sncgb snca,LOC103381528,LOC104922219,LOC103370408,LOC106948771,LOC104951044,LOC106904390 other downstream 153355 10702966 ~ 10715354 (+)
G211336 NA other downstream 173922 10723533 ~ 10725559 (+)
G211354 six3,LOC104922638,LOC103370415 other downstream 251729 10801340 ~ 10803972 (+)
kcng3 LOC104951029,LOC104923031 other downstream 269447 10819058 ~ 10912098 (+)

Expression


Co-expression Network