tap2t (LOC104944438)


Basic Information

Item Value
gene id tap2t
gene name LOC104944438
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 6138198 ~ 6150528 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789142.1
TGCAAACTTGCATGACTGCTGATAGCCGTAGAGTCTGTTTATGAGAGTAAAATTGGAAGCTCAAGTTTAGAAAGTGTCAAATGTacgacaaaaacagaaaagaagtTCATGAGTGCCGTGTTTGCATGTCATGTGTTATCTCTTTGTTGGGGTTGCTACAGTTGAACCATGCGTCACCCAACAgaaagtaaaagtgaaagtgaacCAGCTCACTGAAACAGTAAGCTAACTGTCGACTGTGAGGGGAAATACACGGATCCGCTTAAACTTCCTGCAGTCTCATTGTCCAGCAAAGGAAAATGAATCAAGTGTCAGCATGTGGATTATTCATTATTCTGTTCGACGCTGTGCTTTGTTTGGCACTGTGGGCCGGACTGGTGCTGCTGAAGTGCTCCAGTTGTGGTGGACTGGCAGGTGTGTGGGCCTTTGGGGCAGCAAAGTGGGTCATTCTCCATGTTTTCACATCTGTACTGACGGATGGGAAGCCCCAGGCTGTGCTCCGCAGGTTCGTGGCACTCCTCTGCCTTCTCTCTCCTGTGTTTGAAAGCGGACGGATCTTTATGGCGCCTCCCTCAGAGGGGTACACAGGACCATCTCCTAACCTCAGCATGCTGCTCCTGGGCCTCATGTCCTCGTCGCTGGCCTGTGTGTTTTGGGAAAACCTCTGTGGTGATTCAACGAAGAAAAAGGACAACACTAAGCAGGATGCCTGGCCGCTGCTTGTGAGGATGCTGAAATACTTCAAACCAGACACCCTTTACCTTATTGCAGCTTTCGGTTTCCTCATCTTAGGTGTCATCTGTGATACATACATCCCATTGTATCAGGGGTACGTCATTGATATGCTCAGAGGTGAACTACTTCAAACCAGCTTCTGTTATGCAGTTGGACAGCTGGCACTTGTCTCTCTTGGAAGCGCTCTGTTCTCCAGCTTTAGAGGAGGCATATTTATGTACACCCTGACCAGACTGAACAAGAGACTGAAACATCTGCTGTTTCACACCCTCCTGCAGCAGGAAGTGCACTTCTTTGAGGAGAACAAACCTGGACGTCTTTCCTCCCGCCTGCACTCGGATGTGGACAGGATGGGCCGTACAGTTGCAATGAACGCCAACGTGCTGGTCCGCAGCACAGTCAAAACCTGCCTCATGCTCACAGTGATGCTACGCCTGTCCTGGGAGCTCACTGTGCTCACCTGCATAGAGATGCCACTCTTGGCCATCCTGCAGAACAAATACAGCACCTTGTCCAAGGAGCTGAAAGATCAGATGCAGGACTGCCAAGCTCAGAACAAAGACCTGGCCACCCAGACCTTAAGCGGGATTCACACGGTCCGAAGCTTTAAGGGAGAGAAAGATGAACTGAgaaggtttaaggagtctctgGACCGCATGTGCGCTGTGCAGAGACGTTCAAGTATCTACAGCGCAGTCTTCTGCTTAATACGCAGGcTGGTGACTGTGGGGATAAAGATACTGATGCTGGTCCAGGCCCGCGGGCTCATCTCGTCGGGTCACCTCAGCATCGGTAGTCTcgtctctttcttcttgtaCCAGAAGCCCATGTCAAACAATTTAAAGGAGCTTATGTATTGCTGCGGAGATACGATGTCCACAGTCGGAGTCATCTCCAAAGTGTTCAGTTATCTTGACAGAACACCAAAGTGTAAGAAGGCGGGAGAGTTAGCTCCTGAGAAGCTGGAGGGAAgaattgttttccaaaatgtcaccTTCACGTATCCCTCCTCTTCTGAAGATAAACCAGCTCTGAAGTCGGTTTCTATAGAACTTCGGCCAGGACAGATGACCGCCCTGGTGGGTCCCTCTGGCAGTGGGAAGACTTCCTGCGTCAGCCTCCTGAAGAGGCTGTATGAACCTCAGGAGGGACAGATCCTGCTGGACGGAGAACCGCTGCACCATTACGAACCCAAATACCTTCATCAAAAGATGGCCCTGGTATCCCAGAATCCCGTGCTGTTTTCTGGTTCGCTGAAATACAACATTGCGTACGGCCTGAAGGACTGCCCCATTGAGAAGGTGAAGGAAGCTGCAAAGAAAGCCAACGCAGATGACTTCATCTCTAAACTGGAGAAGGAATATGAAACAGATATCGGTGAATGTGGTGGCAAACTTTCAGACGGACAGAGGCAGTGCATCGCCGTCGTCAGAGCTCTGGTTCGAGAGCCGCAGGTCATCATACTGGATGAGGCAACCAGCAAACTGGATGTTGAAGTGCACCACGCTGTGCTGCAGGAGGTTCTGGCTCGTGGGCGGACCGTCCTGTTGGTGACTCATCAGCTGAAGACTGCGGAGAAGGCGGATCACATCATCTTCATGGAGAAGGGAGCAGTCGCGGAGGAGGGGACGCACCAAGAGCTCATGGCCAAGAGAGAACGCTACTATCGTCTGAAAGAGGAACTGTTCTCTAAACTCATCTGAGAAGAGTTTCTACATGAATGTTAGATGCAACAAGTGATTTGAAATATTCAGCCCAACCTGGTAATCCGCCTGTTTTTCATCTAGAAAAGATTTGTCAGTCGAATCATCTGCGGTAGGAAGGATGTGGTGTGTTCTGCATGTTTTGATGtcgtcacacacagacataggtGACTTTAGAAAGAACTGAAACTCTAACGCTCTAGTGATCTGAGACATTATCAGTATTGTTTTATAAGGCAGTTTTGTATTTTGTAGTATTTCAAGGTGTGCTAGTTAAACTCTAGCTGAAAAGCAAACACTGTGACCACGAGTGATAATTATCGCATAATACTAAATCATAGTAGAACAATCAGTAATATCCGCTACACAGCAATGTATCTCTAAATGTTGCTACAGCTAGCTACTTCTCATACCAAACCATGTAAGACTGAAGCATAACGCAGAACCATCGAGTGTATCTAATTAAACCAGGCTTTGCTTTTCTTCA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006200 obsolete ATP catabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0042626 ATPase-coupled transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789142.1 True 2925 mRNA 0.48 12 6138198 6150528

Neighbor

gene id symbol gene type direction distance location
LOC120551246 NA coding upstream 185 6102549 ~ 6138013 (+)
LOC120551245 slc16a5 coding upstream 189 6123938 ~ 6138009 (+)
LOC120551300 LOC100698148,LOC102195172,LOC103398848 coding upstream 95283 6025572 ~ 6042915 (+)
LOC120551191 LOC100697881,LOC102194592,LOC102300228,LOC101486561,LOC104965354,LOC103398847 coding upstream 119032 5923341 ~ 6019166 (+)
LOC120550766 LOC104937335,LOC104962506,LOC105006852,LOC106579281 coding upstream 293930 5803444 ~ 5844268 (+)
acsf2 LOC104944427,LOC100698949,LOC102195174 coding downstream 3180 6153708 ~ 6196023 (+)
chmp2a chmp2a coding downstream 311009 6461537 ~ 6465229 (+)
LOC120551142 NA coding downstream 322358 6472886 ~ 6474833 (+)
snf8 snf8 coding downstream 325472 6476000 ~ 6482569 (+)
ttll6 ttll6 coding downstream 343170 6493698 ~ 6510384 (+)
G210183 NA non-coding upstream 40637 6072924 ~ 6097561 (+)
G210185 NA non-coding upstream 91704 6044505 ~ 6046494 (+)
G210155 NA non-coding upstream 293440 5757052 ~ 5844758 (+)
G210209 NA non-coding downstream 21039 6171567 ~ 6174214 (+)
G210213 NA non-coding downstream 51379 6201907 ~ 6203384 (+)
G210256 NA non-coding downstream 296883 6447411 ~ 6484415 (+)
G210431 NA non-coding downstream 444741 6595269 ~ 6596781 (+)
G210444 NA non-coding downstream 506001 6656529 ~ 6657157 (+)
kctd2 kctd2,LOC102796578,LOC107089511,LOC103371831,LOC103398851,LOC106521991 other upstream 45460 6083102 ~ 6092738 (+)
LOC120550763 LOC100696279,LOC101467831,LOC107093968 other upstream 450302 5591335 ~ 5687896 (+)
map2k6 LOC103367941,LOC105926483,LOC102221885,LOC100697345,LOC103150707 other upstream 1421615 4674237 ~ 4716583 (+)
LOC120551345 plekha1,LOC106957628 other upstream 2109916 3998373 ~ 4028282 (+)
LOC120550571 NA other upstream 2314947 3818853 ~ 3823251 (+)
LOC120551157 NA other downstream 69341 6219869 ~ 6270445 (+)
stx4 stx4 other downstream 227608 6378136 ~ 6392578 (+)
G210266 msl1 other downstream 320128 6470656 ~ 6472155 (+)
psmd11b LOC103367354,LOC102209997,LOC101470828,LOC100706559,LOC101174707 other downstream 800539 6951067 ~ 6960076 (+)
ormdl3 ormdl3,LOC102783025,LOC100707365,LOC102304808,LOC107387618,LOC106521946 other downstream 880290 7030818 ~ 7043208 (+)

Expression


Co-expression Network