LOC120551740


Basic Information

Item Value
gene id LOC120551740
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 4408832 ~ 4411773 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789280.1
TGATGGGGACCTGAAATATCCATGACCTACCCAATCCAGCTGTGACTAATCACTCAGCCCAGGACACGCGTGGAGAACATGGAGGACGACTTCCGGCCGCAGGTGAAAAAGGTGGCTGTGGCGATGGGCGCGTCCCTCACAGAACAGGAGGTAGACCGTATGCCACGGGACATGAGAATGCAAGGGAACTTCAACTACAGCAGGTTTCTGGAGTACATGAGGCAGTTCGAGACCTCGGAGCAAAGAGAGGAGGCCATCAAGAAGGCCTTCATGATGCTCGACAAAGACGGCAGCGGCTACATAGAGTGGAACGAGATCAAGTACATTCTGTCGACAGTACCGGCTGCGAGCCCGTTGGCTCCCCTCTCCGATGAGGAGGCGGAGGCCGTGATCCAGGCTGGCGACGCTGATGGAGACGGACGCATCGACTACAGAGGTGGGGGCGCCCTCTGGTGCCCTGGCCTGCTGTCACCACTGAGGCTCAGCAGTTAGTCAGTACAGCAGGCTTCACACAG
>XM_039789281.1
TGATGGGGACCTGAAATATCCATGACCTACCCAATCCAGCTGTGACTAATCACTCAGCCCAGGACACGCGTGGAGAACATGGAGGACGACTTCCGGCCGCAGGTGAAAAAGGTGGCTGTGGCGATGGGCGCGTCCCTCACAGAACAGGAGGTAGACCGTATGCCACGGGACATGAGAATGCAAGGGAACTTCAACTACAGCAGGTTTCTGGAGTACATGAGGCAGTTCGAGACCTCGGAGCAAAGAGAGGAGGCCATCAAGAAGGCCTTCATGATGCTCGACAAAGACGGCAGCGGCTACATAGAGTGGAACGAGATCAAGTACATTCTGTCGACAGTACCGGCTGCGAGCCCGTTGGCTCCCCTCTCCGATGAGGAGGCGGAGGCCGTGATCCAGGCTGGCGACGCTGATGGAGACGGACGCATCGACTACAGAGAGTTTTCAGACATGGTGAAGATGGAGAAGAAACCGAGGAAGTAGAGGTCACGTGGTTAATCCGTACTACCAAGAAGATACGAGGAGAGGAAGACGATCTGCCCTCCTTAAAGAATGCTCTGCTTCCTTCTGTAGATCAACACTTGAGAGATTGTGAAGATTGTGATCACTTTGCTAAATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789280.1 False 515 mRNA 0.58 4 4408832 4410593
XM_039789281.1 True 619 mRNA 0.53 5 4408832 4411773

Neighbor

gene id symbol gene type direction distance location
baiap2b baiap2,LOC101465701,LOC102783223 coding upstream 101385 4195773 ~ 4307447 (+)
chmp6b chmp6,LOC103374447,LOC100705156,LOC101486168 coding upstream 225715 4171678 ~ 4183117 (+)
abca5 LOC103361128 coding upstream 248534 4118852 ~ 4160298 (+)
asb3 LOC103361130,LOC104944901 coding upstream 290061 4107220 ~ 4118771 (+)
LOC120551336 htra1 coding upstream 325330 4049249 ~ 4083502 (+)
LOC120551185 LOC104948324,LOC106922417,LOC103150698 coding downstream 244544 4656317 ~ 4670517 (+)
LOC120551365 LOC104929210,LOC103367387 coding downstream 477313 4889086 ~ 4891504 (+)
LOC120550670 NA coding downstream 505176 4916949 ~ 4919967 (+)
plaub NA coding downstream 512910 4924683 ~ 4939821 (+)
hid1b hid1 coding downstream 535197 4946970 ~ 4981418 (+)
G209686 NA non-coding upstream 216664 4191914 ~ 4192168 (+)
G209685 NA non-coding upstream 220350 4188093 ~ 4188482 (+)
G209684 NA non-coding upstream 222112 4183573 ~ 4186720 (+)
LOC120551338 NA non-coding upstream 320994 4085324 ~ 4087838 (+)
G209650 NA non-coding upstream 366146 4021661 ~ 4042686 (+)
G209706 NA non-coding downstream 10288 4422061 ~ 4423044 (+)
G209714 NA non-coding downstream 41391 4453164 ~ 4453398 (+)
G209715 cep131,LOC103374585,LOC102786975 non-coding downstream 42565 4454338 ~ 4455300 (+)
G209716 NA non-coding downstream 47449 4459222 ~ 4459427 (+)
G209717 NA non-coding downstream 50596 4462369 ~ 4462612 (+)
LOC120551345 plekha1,LOC106957628 other upstream 380550 3998373 ~ 4028282 (+)
LOC120550571 NA other upstream 585581 3818853 ~ 3823251 (+)
G209514 NA other upstream 761835 3646009 ~ 3646997 (+)
G209344 NA other upstream 1575158 2671275 ~ 2833674 (+)
LOC120551576 lrch1,LOC106582244 other upstream 2046473 2344281 ~ 2362359 (+)
map2k6 LOC103367941,LOC105926483,LOC102221885,LOC100697345,LOC103150707 other downstream 262464 4674237 ~ 4716583 (+)
LOC120550763 LOC100696279,LOC101467831,LOC107093968 other downstream 1179562 5591335 ~ 5687896 (+)
LOC120551158 NA other downstream 1403463 5815236 ~ 6259659 (+)
kctd2 kctd2,LOC102796578,LOC107089511,LOC103371831,LOC103398851,LOC106521991 other downstream 1671329 6083102 ~ 6092738 (+)
LOC120551157 NA other downstream 1808096 6219869 ~ 6270445 (+)

Expression


Co-expression Network