LOC120551795


Basic Information

Item Value
gene id LOC120551795
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 9042646 ~ 9050128 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789375.1
TATGTATTGAGTCACCagatattgatttattttagatTATAGATAGTGACCAGTATGTTCAGGGTGAATGTATTACcaattatgtactgtatgttttgacAAGTACTCAATAGGTCCGACGTCCTTcttatataccgtctatggaCGGCCCCTACACATTGACATATAAAAGCCCCTACAGGACCCGCTTATTTTCTGAACTTCAGACTCCATTGTGGATAAATGCATCGTTACTTTATGTTGTCTTGCAACCTGAAGAAGGCAATGTTGATGTCGAAACGCATCGTTGTAAAGTTTCGAAATAAATTCTTGACAACATAACCATCACGTTTCAAGGACTTTTTAGTCACCTTTCATATTAcaaagtttagtttagttttagtttaagtttgttttctttccacaCCAACAGCGGGGCCTAGTAAGATGGAAGACGACTACGAGGACGGTTCAGACTGGCAAACGGTGAAGTACCGACGAGCAGGTTAATCAACCGTGAGTTTGACAACGCTCGTAACCGCCATTGGCCCTCCTATGAACGccctaacacACACCTGTCGTACCTGTCGATGATAACCGGGTGGTGGAGCTCcaggagagagcgagagatgcCGCACCGCAGCCACGGCCTACACAGGAAGTGAcgtcaccctcctcctcccgcCCAGGACTGGAACCAGATCGACACAGCTGGGGAGGATGTTCCCCCAGCGCCTGCGGAACAACTACCACAATGCCAGCCCAGAGCACAGCGGGACGACATGAGACCGACACCTACTTCTGGACCACAAGAAGTCACAGTGGAAGTACATCGGACCTCTTCGGACCAGGGGCAGCAGACGGAGCCGGTGGGAGACGAGCTGGGAGAGCCAGCACCACCCTCAACCtaccctcctcccccctccttcccctccttcccctctcttctctctcctctttcctcttctcctcttcttctcccccCTTTAACCCCTCCCCCTTTTAACCCATCCCCTGACACCCCACTCTTCTGTCCCAatcccccttcctcttcctcccacaTCCCTTCTTGTCTCCCCAGGTTCCAGGTTCCGGCCGGCCCTGCTGTGACTCCTGGCATCCTCAAGGGAGGACCGACTACCCCCGTGCCTCTTGCGATCACAATATCTGACATAGAGACCCTTGAGAGGAATGCCTTAAATCGGCCGGCCACTACACCTACGTCTCTCGCAATCACAATCTCTGATGTGGAGACCCCGGAGAAGAAATCCTTAAACCGAACCAAGGAGGTAATTGTTACAGAGGGCGTCACACCACATCACAGACTGGTTCCTCTCAACGCATCACGAGTTCAAAGCAATTTACCTTTTGCTACACCTACACAACAACCTGTAGAGTTTACACCTCACAGACATTTTCCTGTAAACAATAAATGACTGACTGGTCTCTAGTAGCAAACAAAAAGTGGTTAAATATGGGGGACTCAAATCTATCCAGGTTTCCGGCGTACAATGAACCAAACATTCAGATTGAGAGTTTTCCAGGAGCTACGTTTAAACATGCTGAGGCCATATTGGCACGCACTGCTGTTTAACAGGAAGTTGAAAGCTATTTAGAGGTGtgtagtccaggtgccagaaagtagaaatcctgtccagcagctgtcccaaccatcactaaaccagctcctcta
>XM_039789376.1
GGCTAACGGCTATTCCAACCAAACTAACAACCGTGCTAGCTAGCTACGCGGAGGTGGCTAGGATCAACAGCTACAGCTTCCAACAACTACATGGCCGGGAATCAACGCTACAACTGGGGCTCCTCTAACTACAACCAGGGAAACTATGGAGCATCCAGGGGAGAAATAACCGCAACCGCCGCCGCAGTGTAGccctaacacACACCTGTCGTACCTGTCGATGATAACCGGGTGGTGGAGCTCcaggagagagcgagagatgcCGCACCGCAGCCACGGCCTACACAGGAAGTGAcgtcaccctcctcctcccgcCCAGGACTGGAACCAGATCGACACAGCTGGGGAGGATGTTCCCCCAGCGCCTGCGGAACAACTACCACAATGCCAGCCCAGAGCACAGCGGGACGACATGAGACCGACACCTACTTCTGGACCACAAGAAGTCACAGTGGAAGTACATCGGACCTCTTCGGACCAGGGGCAGCAGACGGAGCCGGTGGGAGACGAGCTGGGAGAGCCAGCACCACCCTCAACCtaccctcctcccccctccttcccctccttcccctctcttctctctcctctttcctcttctcctcttcttctcccccCTTTAACCCCTCCCCCTTTTAACCCATCCCCTGACACCCCACTCTTCTGTCCCAatcccccttcctcttcctcccacaTCCCTTCTTGTCTCCCCAGGTTCCAGGTTCCGGCCGGCCCTGCTGTGACTCCTGGCATCCTCAAGGGAGGACCGACTACCCCCGTGCCTCTTGCGATCACAATATCTGACATAGAGACCCTTGAGAGGAATGCCTTAAATCGGCCGGCCACTACACCTACGTCTCTCGCAATCACAATCTCTGATGTGGAGACCCCGGAGAAGAAATCCTTAAACCGAACCAAGGAGGTAATTGTTACAGAGGGCGTCACACCACATCACAGACTGGTTCCTCTCAACGCATCACGAGTTCAAAGCAATTTACCTTTTGCTACACCTACACAACAACCTGTAGAGTTTACACCTCACAGACATTTTCCTGTAAACAATAAATGACTGACTGGTCTCTAGTAGCAAACAAAAAGTGGTTAAATATGGGGGACTCAAATCTATCCAGGTTTCCGGCGTACAATGAACCAAACATTCAGATTGAGAGTTTTCCAGGAGCTACGTTTAAACATGCTGAGGCCATATTGGCACGCACTGCTGTTTAACAGGAAGTTGAAAGCTATTTAGAGGTGtgtagtccaggtgccagaaagtagaaatcctgtccagcagctgtcccaaccatcactaaaccagctcctcta
>XM_039789377.1
GGCTAACGGCTATTCCAACCAAACTAACAACCGTGCTAGCTAGCTACGCGGAGGTGGCTAGGATCAACAGCTACAGCTTCCAACAACTACATGGCCGGGAATCAACGCTACAACTGGGGCTCCTCTAACTACAACCAGGGAAACTATGGAGCATCCAGGGGAGAAATAACCGCAACCGCCGCCGCAGTccctaacacACACCTGTCGTACCTGTCGATGATAACCGGGTGGTGGAGCTCcaggagagagcgagagatgcCGCACCGCAGCCACGGCCTACACAGGAAGTGAcgtcaccctcctcctcccgcCCAGGACTGGAACCAGATCGACACAGCTGGGGAGGATGTTCCCCCAGCGCCTGCGGAACAACTACCACAATGCCAGCCCAGAGCACAGCGGGACGACATGAGACCGACACCTACTTCTGGACCACAAGAAGTCACAGTGGAAGTACATCGGACCTCTTCGGACCAGGGGCAGCAGACGGAGCCGGTGGGAGACGAGCTGGGAGAGCCAGCACCACCCTCAACCtaccctcctcccccctccttcccctccttcccctctcttctctctcctctttcctcttctcctcttcttctcccccCTTTAACCCCTCCCCCTTTTAACCCATCCCCTGACACCCCACTCTTCTGTCCCAatcccccttcctcttcctcccacaTCCCTTCTTGTCTCCCCAGGTTCCAGGTTCCGGCCGGCCCTGCTGTGACTCCTGGCATCCTCAAGGGAGGACCGACTACCCCCGTGCCTCTTGCGATCACAATATCTGACATAGAGACCCTTGAGAGGAATGCCTTAAATCGGCCGGCCACTACACCTACGTCTCTCGCAATCACAATCTCTGATGTGGAGACCCCGGAGAAGAAATCCTTAAACCGAACCAAGGAGGTAATTGTTACAGAGGGCGTCACACCACATCACAGACTGGTTCCTCTCAACGCATCACGAGTTCAAAGCAATTTACCTTTTGCTACACCTACACAACAACCTGTAGAGTTTACACCTCACAGACATTTTCCTGTAAACAATAAATGACTGACTGGTCTCTAGTAGCAAACAAAAAGTGGTTAAATATGGGGGACTCAAATCTATCCAGGTTTCCGGCGTACAATGAACCAAACATTCAGATTGAGAGTTTTCCAGGAGCTACGTTTAAACATGCTGAGGCCATATTGGCACGCACTGCTGTTTAACAGGAAGTTGAAAGCTATTTAGAGGTGtgtagtccaggtgccagaaagtagaaatcctgtccagcagctgtcccaaccatcactaaaccagctcctcta
>XM_039789379.1
aatgacttttttgtgacatactatactatgactttacatagcattttatggcatactatgctatgacattTTCAAGGTTGGTATTGCAGGACAACTGGGATTTGACCCAAATGCAGATGGAGGCAGCTGGATGAATTCAATGTTTTGTTGTAGAAGCATGAGTATTGATTGGCACAGGCATCTTGAGTCCAAATTAGGCAGAATGCCCAGCAGCAGACAGGTAGCAGGCACGTAACAGGTTGCAGAAAAACCACACTGTAGCAATGATGACTAACTGGCAGAGGAACAAAGGCTCTGGGCTGccctaacacACACCTGTCGTACCTGTCGATGATAACCGGGTGGTGGAGCTCcaggagagagcgagagatgcCGCACCGCAGCCACGGCCTACACAGGAAGTGAcgtcaccctcctcctcccgcCCAGGACTGGAACCAGATCGACACAGCTGGGGAGGATGTTCCCCCAGCGCCTGCGGAACAACTACCACAATGCCAGCCCAGAGCACAGCGGGACGACATGAGACCGACACCTACTTCTGGACCACAAGAAGTCACAGTGGAAGTACATCGGACCTCTTCGGACCAGGGGCAGCAGACGGAGCCGGTGGGAGACGAGCTGGGAGAGCCAGCACCACCCTCAACCtaccctcctcccccctccttcccctccttcccctctcttctctctcctctttcctcttctcctcttcttctcccccCTTTAACCCCTCCCCCTTTTAACCCATCCCCTGACACCCCACTCTTCTGTCCCAatcccccttcctcttcctcccacaTCCCTTCTTGTCTCCCCAGGTTCCAGGTTCCGGCCGGCCCTGCTGTGACTCCTGGCATCCTCAAGGGAGGACCGACTACCCCCGTGCCTCTTGCGATCACAATATCTGACATAGAGACCCTTGAGAGGAATGCCTTAAATCGGCCGGCCACTACACCTACGTCTCTCGCAATCACAATCTCTGATGTGGAGACCCCGGAGAAGAAATCCTTAAACCGAACCAAGGAGGTAATTGTTACAGAGGGCGTCACACCACATCACAGACTGGTTCCTCTCAACGCATCACGAGTTCAAAGCAATTTACCTTTTGCTACACCTACACAACAACCTGTAGAGTTTACACCTCACAGACATTTTCCTGTAAACAATAAATGACTGACTGGTCTCTAGTAGCAAACAAAAAGTGGTTAAATATGGGGGACTCAAATCTATCCAGGTTTCCGGCGTACAATGAACCAAACATTCAGATTGAGAGTTTTCCAGGAGCTACGTTTAAACATGCTGAGGCCATATTGGCACGCACTGCTGTTTAACAGGAAGTTGAAAGCTATTTAGAGGTGtgtagtccaggtgccagaaagtagaaatcctgtccagcagctgtcccaaccatcactaaaccagctcctcta
>XM_039789380.1
aatgacttttttgtgacatactatactatgactttacatagcattttatggcatactatgctatgacattTTCAAGGTTGGTATTGCAGGACAACTGGGATTTGACCCAAATGCAGATGGAGGCAGCTGGATGAATTCAATGTTTTGTTGTAGAAGCATGAGTATTGATTGGCACAGGCATCTTGAGTCCAAATTAGGCAGAATGCCCAGCAGCAGACAGGTAGCAGGCACGTAACAGGTTGCAGAAAAACCACACTGTAGCAATGATGACTAACTGGCAGAGGAACAAAGGCTCTGGGCTGCGGGGCCTAGTAAGATGGAAGACGACTACGAGGACGGTTCAGACTGGCAAACGGTGAAGTACCGACGAGCAGGTTAATCAACCGTGAGTTTGACAACGCTCGTAACCGCCATTGGCCCTCCTATGAACGccctaacacACACCTGTCGTACCTGTCGATGATAACCGGGTGGTGGAGCTCcaggagagagcgagagatgcCGCACCGCAGCCACGGCCTACACAGGAAGTGAcgtcaccctcctcctcccgcCCAGGACTGGAACCAGATCGACACAGCTGGGGAGGATGTTCCCCCAGCGCCTGCGGAACAACTACCACAATGCCAGCCCAGAGCACAGCGGGACGACATGAGACCGACACCTACTTCTGGACCACAAGAAGTCACAGTGGAAGTACATCGGACCTCTTCGGACCAGGGGCAGCAGACGGAGCCGGTGGGAGACGAGCTGGGAGAGCCAGCACCACCCTCAACCtaccctcctcccccctccttcccctccttcccctctcttctctctcctctttcctcttctcctcttcttctcccccCTTTAACCCCTCCCCCTTTTAACCCATCCCCTGACACCCCACTCTTCTGTCCCAatcccccttcctcttcctcccacaTCCCTTCTTGTCTCCCCAGGTTCCAGGTTCCGGCCGGCCCTGCTGTGACTCCTGGCATCCTCAAGGGAGGACCGACTACCCCCGTGCCTCTTGCGATCACAATATCTGACATAGAGACCCTTGAGAGGAATGCCTTAAATCGGCCGGCCACTACACCTACGTCTCTCGCAATCACAATCTCTGATGTGGAGACCCCGGAGAAGAAATCCTTAAACCGAACCAAGGAGtgctaGTCCTGGAAGACAACGTTGGGGGTctgaaaacaccaaacaccagtCTTTACCTTCTTGCACTGTCTAAGGAGAGGAGTTAATCACAGAGAGTCTGGACCCAGGGTTACACAACATTGTTTGCCACTGACCTGGTGGTGTGATTATACATGATTCTATGGGATGTGGAACATACTGTATGAAGCTGAGCTCTGTGTATACATGCTGTACCAAGATCTTCTCCGGCGTCAGATTTGTGTTGTAATAAACATATATTTTCAAGTAAGCA
>XR_005637919.1
aatgacttttttgtgacatactatactatgactttacatagcattttatggcatactatgctatgacattTTCAAGGTTGGTATTGCAGGACAACTGGGATTTGACCCAAATGCAGATGGAGGCAGCTGGATGAATTCAATGTTTTGTTGTAGAAGCATGAGTATTGATTGGCACAGGCATCTTGAGTCCAAATTAGGCAGAATGCCCAGCAGCAGACAGGTAGCAGGCACGTAACAGGTTGCAGAAAAACCACACTGTAGCAATGATGACTAACTGGCAGAGGAACAAAGGCTCTGGGCTGCGGGGCCTAGTAAGATGGAAGACGACTACGAGGACGGTTCAGACTGGCAAACGGTGAAGTACCGACGAGCAGGTTAATCAACCccctaacacACACCTGTCGTACCTGTCGATGATAACCGGGTGGTGGAGCTCcaggagagagcgagagatgcCGCACCGCAGCCACGGCCTACACAGGAAGTGAcgtcaccctcctcctcccgcCCAGGACTGGAACCAGATCGACACAGCTGGGGAGGATGTTCCCCCAGCGCCTGCGGAACAACTACCACAATGCCAGCCCAGAGCACAGCGGGACGACATGAGACCGACACCTACTTCTGGACCACAAGAAGTCACAGTGGAAGTACATCGGACCTCTTCGGACCAGGGGCAGCAGACGGAGCCGGTGGGAGACGAGCTGGGAGAGCCAGCACCACCCTCAACCtaccctcctcccccctccttcccctccttcccctctcttctctctcctctttcctcttctcctcttcttctcccccCTTTAACCCCTCCCCCTTTTAACCCATCCCCTGACACCCCACTCTTCTGTCCCAatcccccttcctcttcctcccacaTCCCTTCTTGTCTCCCCAGGTTCCAGGTTCCGGCCGGCCCTGCTGTGACTCCTGGCATCCTCAAGGGAGGACCGACTACCCCCGTGCCTCTTGCGATCACAATATCTGACATAGAGACCCTTGAGAGGAATGCCTTAAATCGGCCGGCCACTACACCTACGTCTCTCGCAATCACAATCTCTGATGTGGAGACCCCGGAGAAGAAATCCTTAAACCGAACCAAGGAGGTAATTGTTACAGAGGGCGTCACACCACATCACAGACTGGTTCCTCTCAACGCATCACGAGTTCAAAGCAATTTACCTTTTGCTACACCTACACAACAACCTGTAGAGTTTACACCTCACAGACATTTTCCTGTAAACAATAAATGACTGACTGGTCTCTAGTAGCAAACAAAAAGTGGTTAAATATGGGGGACTCAAATCTATCCAGGTTTCCGGCGTACAATGAACCAAACATTCAGATTGAGAGTTTTCCAGGAGCTACGTTTAAACATGCTGAGGCCATATTGGCACGCACTGCTGTTTAACAGGAAGTTGAAAGCTATTTAGAGGTGtgtagtccaggtgccagaaagtagaaatcctgtccagcagctgtcccaaccatcactaaaccagctcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789375.1 True 1672 mRNA 0.49 2 9043571 9046470
XM_039789376.1 False 1323 mRNA 0.54 2 9044287 9046470
XM_039789377.1 False 1319 mRNA 0.54 2 9044287 9046470
XM_039789379.1 False 1433 mRNA 0.51 2 9042646 9046470
XM_039789380.1 False 1429 mRNA 0.52 4 9042646 9050128
XR_005637919.1 False 1514 transcript 0.51 3 9042646 9046468

Neighbor

gene id symbol gene type direction distance location
hs3st3b1b hs3st3b1,LOC101472659,LOC100710426 coding upstream 202200 8819762 ~ 8840446 (+)
LOC120550936 LOC100695060,LOC101472949,LOC102791232,LOC102301473 coding upstream 227021 8777654 ~ 8815625 (+)
fbxw10 NA coding upstream 432982 8601846 ~ 8609664 (+)
trnag-ccc_1 NA coding upstream 441398 8601178 ~ 8601248 (+)
LOC120551063 ppp1r9b,LOC100709627,LOC102205956,LOC102789794 coding upstream 446631 8576662 ~ 8596015 (+)
ttyh2 ttyh2,LOC102794331 coding downstream 527262 9577390 ~ 9644745 (+)
kif19 kif19 coding downstream 595563 9645691 ~ 9690366 (+)
si:ch73-127m5.2 LOC104961255,LOC103352807,LOC101468102 coding downstream 641384 9691512 ~ 9696774 (+)
si:dkey-21e13.3 LOC103352816,LOC100696385,LOC108246058,LOC101467604,LOC102237836 coding downstream 646800 9696928 ~ 9703412 (+)
si:dkey-21c1.4 LOC102796569,LOC101161774 coding downstream 800595 9850723 ~ 9858242 (+)
G210972 NA non-coding upstream 31258 9011012 ~ 9011388 (+)
G210968 NA non-coding upstream 62613 8979808 ~ 8980033 (+)
G210964 NA non-coding upstream 70947 8969083 ~ 8971699 (+)
G210938 NA non-coding upstream 368386 8674006 ~ 8674260 (+)
G210866 NA non-coding upstream 417538 8581005 ~ 8625108 (+)
G211022 NA non-coding downstream 371324 9421452 ~ 9421689 (+)
LOC120550588 NA non-coding downstream 402471 9452599 ~ 9456949 (+)
G211030 NA non-coding downstream 445883 9496011 ~ 9497523 (+)
G211084 NA non-coding downstream 778721 9828849 ~ 9830042 (+)
G211085 NA non-coding downstream 784932 9835060 ~ 9838125 (+)
gngt2b NA other upstream 544992 8496613 ~ 8497654 (+)
dydc2 LOC101484997 other upstream 980369 8057659 ~ 8062277 (+)
LOC120551082 LOC104957044,LOC103364391,LOC100710506,LOC102194388,LOC102291580 other upstream 1069430 7963369 ~ 7973216 (+)
ormdl3 ormdl3,LOC102783025,LOC100707365,LOC102304808,LOC107387618,LOC106521946 other upstream 1999438 7030818 ~ 7043208 (+)
psmd11b LOC103367354,LOC102209997,LOC101470828,LOC100706559,LOC101174707 other upstream 2082570 6951067 ~ 6960076 (+)
rpl38 NA other downstream 517401 9567529 ~ 9576418 (+)
LOC120551355 LOC102295310,LOC103352803,LOC102796261,LOC107102520 other downstream 788891 9839019 ~ 9849898 (+)
qki2 LOC104923420,LOC105926446,LOC103481625,LOC106939037,LOC106928957,LOC102292206,LOC100712570,LOC103376616,LOC106516672,LOC107090926,LOC103381788,LOC106519024 other downstream 834242 9884370 ~ 9898509 (+)
G211151 NA other downstream 1003133 10053261 ~ 10062702 (+)
G211164 rnf157 other downstream 1012657 10062785 ~ 10065126 (+)

Expression


Co-expression Network