G217352 (ift74)


Basic Information

Item Value
gene id G217352
gene name ift74
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 1517494 ~ 1521537 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU294175
GAGCCTTGGTCTCCTCAAATGACTCTAGGTACCGGTCaatttcctcctctttcttcttcagcTCTTTGTATTTCTGCTGACACTCCCCCTGCGCTTCCTCTGAGTCCTGCTCCAGTTGTTGGATCTCCTCTTTGATTTTTTGCGTCCTGTCCCTGATCTCTGTAAGCTGTCTCTCCATGCTGGCGATTTCCTGGTTGTCCTCCTTCACCTGTTTGAATAATTgctctctttcctcctgtggGGAGCCCAGGCTCTTGTGCTCAGCCTCCATGGTGTCCCGCTTCGCCTCCAGCGCTGACAGAGTCTCATGAAGCCGAACCACTTCCTGCTTTATGTGCGAGTGGGCCAGCTCAGCATCGTAGTCCTCCTTCCTAGTTATCAGGATGTCCAGCTCCT

Function

symbol description
ift74 Predicted to enable beta-tubulin binding activity. Acts upstream of or within gastrulation and pronephric proximal tubule development. Predicted to be part of intraciliary transport particle B. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome. Orthologous to human IFT74 (intraflagellar transport 74).

NR:

description
PREDICTED: intraflagellar transport protein 74 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294175 True 396 lncRNA 0.53 6 1517494 1521537

Neighbor

gene id symbol gene type direction distance location
LOC120552693 NA coding upstream 1062959 453375 ~ 454535 (+)
LOC120551998 NA coding downstream 1857 1523394 ~ 1529309 (+)
trnaq-uug_4 NA coding downstream 47850 1569387 ~ 1569454 (+)
trnal-cag_5 NA coding downstream 50126 1571663 ~ 1571745 (+)
trnaq-cug_17 NA coding downstream 50616 1572153 ~ 1572224 (+)
trnal-cag_6 NA coding downstream 51614 1573151 ~ 1573233 (+)
G217326 NA non-coding upstream 163910 1352160 ~ 1353584 (+)
G217268 NA non-coding upstream 168670 886018 ~ 1348824 (+)
LOC120551977 NA non-coding upstream 662622 852609 ~ 854872 (+)
G217250 NA non-coding upstream 802174 715121 ~ 715320 (+)
G217246 NA non-coding upstream 828149 689102 ~ 689345 (+)
G217378 NA non-coding downstream 131640 1653177 ~ 1731066 (+)
G217384 NA non-coding downstream 228936 1750473 ~ 1835068 (+)
G217389 NA non-coding downstream 282282 1803819 ~ 1830678 (+)
LOC120552171 NA non-coding downstream 546766 2068303 ~ 2069213 (+)
G217444 NA non-coding downstream 685714 2207251 ~ 2207564 (+)
zcchc2 zcchc2 other upstream 12279 1462750 ~ 1505215 (+)
G217377 NA other downstream 147625 1669162 ~ 1675400 (+)
G217606 svil other downstream 1484746 3006283 ~ 3021642 (+)
LOC120552392 mtpap other downstream 1699078 3220615 ~ 3233822 (+)
G217723 cnn3 other downstream 1973913 3495450 ~ 3543785 (+)
chchd7 chchd7,LOC102799933 other downstream 2148883 3670420 ~ 3704375 (+)

Expression


Co-expression Network